Wall clock time and date at job start Tue Mar 9 2021 13:00:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35658 * 117.00276 * 2 1 4 4 C 1.38399 * 120.11756 * 0.02562 * 3 2 1 5 5 C 1.38730 * 120.02955 * 179.97438 * 4 3 2 6 6 O 1.35716 * 119.85923 * 180.02562 * 5 4 3 7 7 C 1.42897 * 117.00302 * 359.97438 * 6 5 4 8 8 C 1.39142 * 120.27344 * 0.03901 * 5 4 3 9 9 C 1.50698 * 119.87876 * 179.97438 * 8 5 4 10 10 O 1.42902 * 109.46826 * 75.00232 * 9 8 5 11 11 Si 1.86295 * 109.47447 * 195.00323 * 9 8 5 12 12 C 1.37579 * 120.24248 * 359.97438 * 8 5 4 13 13 C 1.39824 * 119.96102 * 359.69457 * 12 8 5 14 14 C 1.47309 * 120.13304 * 180.32084 * 13 12 8 15 15 O 1.21619 * 119.99515 * 180.27677 * 14 13 12 16 16 N 1.34774 * 120.00250 * 0.27842 * 14 13 12 17 17 C 1.46493 * 120.00168 * 180.02562 * 16 14 13 18 18 H 1.09004 * 112.84550 * 336.19227 * 17 16 14 19 19 C 1.53777 * 113.62000 * 107.50042 * 17 16 14 20 20 C 1.53776 * 87.08245 * 139.97907 * 19 17 16 21 21 H 1.09006 * 113.61154 * 89.11804 * 20 19 17 22 22 C 1.50702 * 113.69379 * 220.00526 * 20 19 17 23 23 N 1.30491 * 125.65473 * 192.22789 * 22 20 19 24 24 C 1.34125 * 109.25861 * 179.89588 * 23 22 20 25 25 C 1.34668 * 108.02327 * 0.37461 * 24 23 22 26 26 N 1.35048 * 125.64455 * 12.54044 * 22 20 19 27 27 C 1.53780 * 87.08340 * 334.57078 * 20 19 17 28 28 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46938 * 59.99682 * 1 2 3 30 30 H 1.09004 * 109.46926 * 299.99803 * 1 2 3 31 31 H 1.08001 * 119.98566 * 359.97438 * 4 3 2 32 32 H 1.09003 * 109.47324 * 180.02562 * 7 6 5 33 33 H 1.08998 * 109.47075 * 300.00186 * 7 6 5 34 34 H 1.08997 * 109.47006 * 60.00556 * 7 6 5 35 35 H 1.09000 * 109.47403 * 315.00763 * 9 8 5 36 36 H 0.96697 * 114.00158 * 60.00397 * 10 9 8 37 37 H 1.48493 * 110.00350 * 180.02562 * 11 9 8 38 38 H 1.48506 * 110.00032 * 301.32309 * 11 9 8 39 39 H 1.08000 * 120.02204 * 179.97438 * 12 8 5 40 40 H 0.97001 * 119.99814 * 359.97438 * 16 14 13 41 41 H 1.09002 * 113.61470 * 254.53598 * 19 17 16 42 42 H 1.08998 * 113.60924 * 25.43054 * 19 17 16 43 43 H 1.08005 * 125.99285 * 180.18539 * 24 23 22 44 44 H 1.07998 * 126.59558 * 179.81505 * 25 24 23 45 45 H 0.96998 * 126.40131 * 359.94523 * 26 22 20 46 46 H 1.08998 * 113.60968 * 270.88418 * 27 20 19 47 47 H 1.09002 * 113.61640 * 139.98093 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2087 0.0000 4 6 1.2936 2.3710 0.0005 5 6 1.9254 3.6061 0.0011 6 8 1.1853 4.7436 0.0021 7 6 -0.2358 4.5931 0.0021 8 6 3.3147 3.6833 0.0003 9 6 3.9917 5.0297 0.0003 10 8 3.8950 5.6114 1.3019 11 14 5.7861 4.8225 -0.4556 12 6 4.0725 2.5351 -0.0006 13 6 3.4462 1.2850 0.0059 14 6 4.2539 0.0531 0.0122 15 8 3.7065 -1.0329 0.0127 16 7 5.5995 0.1296 0.0174 17 6 6.4028 -1.0954 0.0231 18 1 5.8647 -1.9525 0.4282 19 6 7.1003 -1.3811 -1.3173 20 6 8.3218 -1.8273 -0.4967 21 1 8.3090 -2.8854 -0.2348 22 6 9.6385 -1.3853 -1.0815 23 7 10.8155 -1.8139 -0.7157 24 6 11.7566 -1.2054 -1.4525 25 6 11.1399 -0.3617 -2.3019 26 7 9.7962 -0.4754 -2.0670 27 6 7.8061 -0.9091 0.6239 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 0.5138 0.8900 31 1 0.2150 2.3165 0.0005 32 1 -0.7054 5.5768 0.0025 33 1 -0.5430 4.0446 -0.8884 34 1 -0.5429 4.0432 0.8916 35 1 3.5052 5.6810 -0.7258 36 1 4.3077 5.0845 1.9999 37 1 6.4652 6.1431 -0.4585 38 1 6.4531 3.9111 0.5086 39 1 5.1506 2.5992 -0.0016 40 1 6.0360 0.9958 0.0166 41 1 6.6384 -2.1876 -1.8868 42 1 7.2789 -0.4876 -1.9155 43 1 12.8225 -1.3621 -1.3759 44 1 11.6143 0.2806 -3.0291 45 1 9.0892 0.0072 -2.5233 46 1 8.1777 0.1133 0.5562 47 1 7.9140 -1.3347 1.6215 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:42 Heat of formation + Delta-G solvation = -11.351903 kcal Electronic energy + Delta-G solvation = -32431.759129 eV Core-core repulsion = 27970.642197 eV Total energy + Delta-G solvation = -4461.116933 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.06509 -42.10824 -40.86187 -40.07774 -39.05985 -38.49300 -37.05312 -34.60964 -33.39094 -32.28216 -31.82662 -30.43269 -29.12386 -28.32605 -26.90901 -26.37364 -26.06919 -24.45349 -23.01209 -22.47034 -21.74305 -21.42463 -20.80778 -20.04601 -19.08385 -18.80387 -18.12511 -17.97876 -17.26518 -17.18980 -16.65330 -16.60260 -16.47666 -16.31230 -15.89518 -15.82504 -15.73137 -15.64300 -15.48243 -14.92317 -14.84914 -14.57288 -14.31745 -14.11221 -13.94802 -13.73405 -13.66538 -13.40756 -13.25607 -12.81100 -12.66731 -12.60135 -12.50224 -12.26141 -12.05764 -11.87120 -11.75134 -11.72156 -10.93947 -10.91772 -10.73283 -10.60876 -10.07094 -9.95283 -9.30871 -9.18467 -5.11538 -0.25096 0.06898 1.10440 1.16379 1.38999 1.78087 1.85808 2.01067 2.03403 2.10535 2.20811 2.22742 2.63689 3.24817 3.33098 3.35756 3.39157 3.54068 3.56682 3.68195 3.69705 3.77327 3.90844 3.95611 4.01968 4.05278 4.10022 4.10446 4.14865 4.19099 4.39586 4.43110 4.46971 4.49542 4.51498 4.56956 4.61247 4.72903 4.74058 4.81903 4.87820 4.89741 4.98414 5.09110 5.21102 5.25476 5.48994 5.83642 5.96540 6.24548 6.39936 6.40548 6.49891 7.19403 7.31329 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.236 3.764 4 C -0.314 4.314 5 C 0.224 3.776 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.195 4.195 9 C -0.057 4.057 10 O -0.523 6.523 11 Si 0.679 3.321 12 C -0.013 4.013 13 C -0.210 4.210 14 C 0.568 3.432 15 O -0.515 6.515 16 N -0.724 5.724 17 C 0.130 3.870 18 H 0.125 0.875 19 C -0.150 4.150 20 C -0.022 4.022 21 H 0.125 0.875 22 C 0.221 3.779 23 N -0.486 5.486 24 C -0.027 4.027 25 C -0.056 4.056 26 N -0.566 5.566 27 C -0.134 4.134 28 H 0.107 0.893 29 H 0.058 0.942 30 H 0.057 0.943 31 H 0.145 0.855 32 H 0.107 0.893 33 H 0.060 0.940 34 H 0.059 0.941 35 H 0.119 0.881 36 H 0.373 0.627 37 H -0.253 1.253 38 H -0.257 1.257 39 H 0.139 0.861 40 H 0.396 0.604 41 H 0.087 0.913 42 H 0.081 0.919 43 H 0.171 0.829 44 H 0.178 0.822 45 H 0.417 0.583 46 H 0.086 0.914 47 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.936 3.223 -3.404 5.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.186 3.814 4 C -0.334 4.334 5 C 0.176 3.824 6 O -0.206 6.206 7 C -0.074 4.074 8 C -0.196 4.196 9 C -0.167 4.167 10 O -0.329 6.329 11 Si 0.581 3.419 12 C -0.032 4.032 13 C -0.214 4.214 14 C 0.356 3.644 15 O -0.391 6.391 16 N -0.376 5.376 17 C 0.025 3.975 18 H 0.143 0.857 19 C -0.190 4.190 20 C -0.043 4.043 21 H 0.143 0.857 22 C -0.043 4.043 23 N -0.206 5.206 24 C -0.175 4.175 25 C -0.190 4.190 26 N -0.170 5.170 27 C -0.174 4.174 28 H 0.126 0.874 29 H 0.077 0.923 30 H 0.076 0.924 31 H 0.163 0.837 32 H 0.125 0.875 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.136 0.864 36 H 0.220 0.780 37 H -0.177 1.177 38 H -0.183 1.183 39 H 0.156 0.844 40 H 0.231 0.769 41 H 0.105 0.895 42 H 0.099 0.901 43 H 0.188 0.812 44 H 0.195 0.805 45 H 0.256 0.744 46 H 0.105 0.895 47 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -2.502 2.402 -2.857 4.494 hybrid contribution -0.911 1.342 0.208 1.635 sum -3.413 3.744 -2.649 5.717 Atomic orbital electron populations 1.23251 0.78160 1.04904 1.01356 1.86400 1.21233 1.25019 1.85719 1.18727 0.90634 0.84425 0.87622 1.21314 1.01168 0.91503 1.19389 1.18716 0.90423 0.84703 0.88545 1.86161 1.19481 1.28478 1.86513 1.23221 0.77783 1.04693 1.01656 1.19356 0.90793 0.96233 1.13263 1.24789 1.10622 0.92924 0.88399 1.86658 1.80014 1.49945 1.16296 0.95371 0.74424 0.82264 0.89879 1.20874 0.99243 0.90108 0.92947 1.19033 0.90656 0.93529 1.18207 1.17840 0.81767 0.88608 0.76197 1.90854 1.71315 1.28654 1.48262 1.45858 1.05954 1.09135 1.76658 1.22436 0.90023 0.89049 0.96006 0.85704 1.23584 0.95442 1.02167 0.97785 1.20769 0.85811 1.01430 0.96291 0.85659 1.22871 0.95910 0.93496 0.92061 1.70246 0.97814 1.26112 1.26393 1.22419 0.99594 0.98590 0.96890 1.22814 0.82894 1.06994 1.06308 1.43268 1.08391 1.34327 1.30970 1.23444 0.94069 1.00395 0.99459 0.87419 0.92339 0.92399 0.83737 0.87475 0.92179 0.92242 0.86355 0.78023 1.17741 1.18269 0.84384 0.76878 0.89476 0.90071 0.81210 0.80479 0.74448 0.89541 0.89325 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.79 8.56 -40.60 -0.35 -1.14 16 3 C 0.24 0.47 6.70 -38.74 -0.26 0.21 16 4 C -0.31 -0.07 8.01 -39.34 -0.31 -0.39 16 5 C 0.22 0.15 6.67 -39.06 -0.26 -0.11 16 6 O -0.30 -0.21 9.80 -18.85 -0.18 -0.39 16 7 C 0.02 -0.06 9.80 101.05 0.99 0.93 16 8 C -0.20 0.02 5.27 -104.53 -0.55 -0.53 16 9 C -0.06 0.03 2.37 36.00 0.09 0.11 16 10 O -0.52 -0.61 12.88 -35.23 -0.45 -1.06 16 11 Si 0.68 -1.50 30.24 -169.99 -5.14 -6.64 16 12 C -0.01 0.01 8.14 -39.23 -0.32 -0.31 16 13 C -0.21 -0.30 5.89 -104.83 -0.62 -0.92 16 14 C 0.57 1.41 7.76 -12.57 -0.10 1.31 16 15 O -0.52 -3.20 14.75 -16.66 -0.25 -3.44 16 16 N -0.72 0.59 5.30 -54.13 -0.29 0.30 16 17 C 0.13 -0.15 4.24 -67.12 -0.28 -0.43 16 18 H 0.13 0.04 7.46 -51.93 -0.39 -0.35 16 19 C -0.15 0.33 7.36 -25.92 -0.19 0.14 16 20 C -0.02 0.02 4.29 -90.96 -0.39 -0.37 16 21 H 0.13 -0.11 8.14 -51.93 -0.42 -0.54 16 22 C 0.22 0.28 7.37 -155.42 -1.14 -0.87 16 23 N -0.49 -2.01 11.25 -10.82 -0.12 -2.14 16 24 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 25 C -0.06 0.02 12.04 -16.56 -0.20 -0.18 16 26 N -0.57 0.55 5.94 -10.23 -0.06 0.49 16 27 C -0.13 0.24 7.38 -25.92 -0.19 0.05 16 28 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 31 H 0.15 -0.28 4.50 -52.49 -0.24 -0.51 16 32 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 33 H 0.06 -0.23 7.65 -51.93 -0.40 -0.62 16 34 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 35 H 0.12 -0.04 7.82 -51.93 -0.41 -0.45 16 36 H 0.37 -0.70 8.70 45.56 0.40 -0.30 16 37 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 38 H -0.26 0.42 6.68 56.52 0.38 0.80 16 39 H 0.14 -0.44 3.16 -52.49 -0.17 -0.61 16 40 H 0.40 -1.25 6.75 -40.82 -0.28 -1.52 16 41 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 42 H 0.08 -0.29 6.65 -51.93 -0.35 -0.64 16 43 H 0.17 0.05 8.06 -52.48 -0.42 -0.37 16 44 H 0.18 -0.60 8.06 -52.49 -0.42 -1.03 16 45 H 0.42 -1.64 7.54 -40.82 -0.31 -1.95 16 46 H 0.09 -0.19 8.07 -51.93 -0.42 -0.60 16 47 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 385.52 15.07 5.81 5.81 Total: 0.00 -11.93 385.52 -9.91 -21.85 By element: Atomic # 1 Polarization: -7.04 SS G_CDS: -5.92 Total: -12.96 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -2.96 Total: -0.66 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.47 Total: -1.35 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -1.23 Total: -6.04 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.14 Total: -6.64 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -11.93 -9.91 -21.85 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.493 kcal (2) G-P(sol) polarization free energy of solvation -11.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.913 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds