Wall clock time and date at job start Tue Mar 9 2021 13:00:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86307 * 109.46947 * 2 1 4 4 C 1.50703 * 109.46956 * 240.00467 * 2 1 3 5 5 C 1.34455 * 126.48290 * 105.02469 * 4 2 1 6 6 N 1.36558 * 109.98411 * 179.97438 * 5 4 2 7 7 C 1.37830 * 109.86181 * 0.02562 * 6 5 4 8 8 C 1.38643 * 133.38133 * 180.02562 * 7 6 5 9 9 C 1.39316 * 119.66684 * 179.97438 * 8 7 6 10 10 C 1.47581 * 119.83419 * 179.97438 * 9 8 7 11 11 O 1.21593 * 119.99937 * 359.97438 * 10 9 8 12 12 N 1.34775 * 120.00309 * 179.97438 * 10 9 8 13 13 C 1.46498 * 119.99934 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.91169 * 336.24948 * 13 12 10 15 15 C 1.53782 * 113.61285 * 107.50640 * 13 12 10 16 16 C 1.53787 * 87.08247 * 139.97822 * 15 13 12 17 17 H 1.08998 * 113.68996 * 89.12764 * 16 15 13 18 18 C 1.50701 * 113.61336 * 220.01633 * 16 15 13 19 19 N 1.30502 * 125.64762 * 192.67332 * 18 16 15 20 20 C 1.34127 * 109.25213 * 180.29844 * 19 18 16 21 21 C 1.34664 * 108.02120 * 359.71946 * 20 19 18 22 22 N 1.35041 * 125.64885 * 12.49929 * 18 16 15 23 23 C 1.53777 * 87.08109 * 334.56704 * 16 15 13 24 24 C 1.40209 * 120.33554 * 0.24726 * 9 8 7 25 25 C 1.36225 * 120.37771 * 359.50635 * 24 9 8 26 26 C 1.39885 * 119.95856 * 0.47108 * 25 24 9 27 27 H 0.96695 * 114.00108 * 59.99736 * 1 2 3 28 28 H 1.08993 * 109.47260 * 120.00170 * 2 1 3 29 29 H 1.48501 * 109.99605 * 60.00326 * 3 2 1 30 30 H 1.48497 * 109.99866 * 181.31659 * 3 2 1 31 31 H 1.07998 * 125.00812 * 359.97438 * 5 4 2 32 32 H 0.97001 * 125.07225 * 179.97438 * 6 5 4 33 33 H 1.07998 * 120.16826 * 359.97438 * 8 7 6 34 34 H 0.97001 * 120.00186 * 0.02562 * 12 10 9 35 35 H 1.08997 * 113.61450 * 25.43291 * 15 13 12 36 36 H 1.08996 * 113.61405 * 254.52709 * 15 13 12 37 37 H 1.08000 * 125.98932 * 179.73190 * 20 19 18 38 38 H 1.08002 * 126.59111 * 179.97438 * 21 20 19 39 39 H 0.97001 * 126.40228 * 359.97438 * 22 18 16 40 40 H 1.08997 * 113.61776 * 139.97634 * 23 16 15 41 41 H 1.09001 * 113.61524 * 270.88313 * 23 16 15 42 42 H 1.07999 * 119.80803 * 179.74291 * 24 9 8 43 43 H 1.08001 * 120.02233 * 180.25913 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.4620 -0.1362 -2.3244 6 7 2.8042 -1.0945 -3.2351 7 6 2.4946 -2.3429 -2.7398 8 6 2.6314 -3.6277 -3.2427 9 6 2.2130 -4.7153 -2.4791 10 6 2.3564 -6.0844 -3.0111 11 8 2.8381 -6.2610 -4.1134 12 7 1.9532 -7.1390 -2.2751 13 6 2.0950 -8.4980 -2.8034 14 1 2.1365 -8.5278 -3.8922 15 6 3.2086 -9.3108 -2.1220 16 6 2.2552 -10.5162 -2.1785 17 1 2.3397 -11.0987 -3.0959 18 6 2.2883 -11.3707 -0.9377 19 7 1.7643 -12.5600 -0.8190 20 6 1.9799 -13.0163 0.4237 21 6 2.6688 -12.0766 1.0989 22 7 2.8680 -11.0340 0.2346 23 6 1.0998 -9.5016 -2.1972 24 6 1.6513 -4.5153 -1.2101 25 6 1.5178 -3.2567 -0.7064 26 6 1.9336 -2.1546 -1.4609 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5138 0.8899 29 1 1.5615 2.4678 1.2086 30 1 3.5346 1.7704 -0.0321 31 1 2.5977 0.9263 -2.4625 32 1 3.2046 -0.9223 -4.1017 33 1 3.0601 -3.7846 -4.2215 34 1 1.5685 -6.9982 -1.3958 35 1 3.4333 -8.9791 -1.1083 36 1 4.1005 -9.4303 -2.7369 37 1 1.6576 -13.9702 0.8144 38 1 3.0001 -12.1343 2.1252 39 1 3.3347 -10.2062 0.4292 40 1 0.2894 -9.7751 -2.8729 41 1 0.7481 -9.2220 -1.2041 42 1 1.3260 -5.3643 -0.6272 43 1 1.0881 -3.1096 0.2735 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:50 Heat of formation + Delta-G solvation = 85.027914 kcal Electronic energy + Delta-G solvation = -27626.171417 eV Core-core repulsion = 23640.257638 eV Total energy + Delta-G solvation = -3985.913779 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.137 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -43.08575 -42.52210 -41.11835 -39.42881 -37.88267 -37.46742 -34.71621 -33.40789 -33.29104 -31.03438 -30.75644 -30.19088 -26.94593 -26.69725 -26.28862 -24.43767 -23.66884 -22.60984 -21.76594 -21.43838 -20.93206 -20.71228 -19.44331 -19.06248 -18.33273 -17.68589 -17.22528 -17.01007 -16.57623 -16.24695 -15.91640 -15.81179 -15.76256 -15.58838 -15.18843 -14.94910 -14.89169 -14.76280 -14.65306 -14.39830 -14.06150 -14.01753 -13.71014 -13.55215 -13.15920 -12.67962 -12.53406 -12.34598 -12.27643 -12.08899 -11.95570 -11.78938 -10.96258 -10.94831 -10.92200 -10.79462 -10.38914 -10.14600 -9.39936 -9.32601 -8.85554 -5.13325 -0.30648 0.35054 1.08603 1.25269 1.32953 1.58763 1.82620 1.93933 1.95246 2.07896 2.20372 2.22973 2.88165 3.21624 3.31145 3.50751 3.51944 3.54216 3.65056 3.71048 3.73107 3.81651 3.89018 4.05193 4.12790 4.27592 4.38238 4.39953 4.43276 4.49453 4.50873 4.53408 4.58040 4.69009 4.72489 4.78444 4.85607 4.94072 5.04495 5.17669 5.19640 5.37828 5.39012 5.48494 5.56785 5.82027 5.94249 6.32323 6.37726 6.42525 6.61880 7.17479 7.17807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.030 4.030 3 Si 0.685 3.315 4 C -0.211 4.211 5 C 0.078 3.922 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.055 4.055 9 C -0.123 4.123 10 C 0.565 3.435 11 O -0.536 6.536 12 N -0.717 5.717 13 C 0.127 3.873 14 H 0.125 0.875 15 C -0.151 4.151 16 C -0.022 4.022 17 H 0.126 0.874 18 C 0.220 3.780 19 N -0.486 5.486 20 C -0.026 4.026 21 C -0.057 4.057 22 N -0.566 5.566 23 C -0.133 4.133 24 C -0.114 4.114 25 C -0.073 4.073 26 C -0.063 4.063 27 H 0.377 0.623 28 H 0.111 0.889 29 H -0.254 1.254 30 H -0.256 1.256 31 H 0.179 0.821 32 H 0.422 0.578 33 H 0.137 0.863 34 H 0.401 0.599 35 H 0.080 0.920 36 H 0.086 0.914 37 H 0.171 0.829 38 H 0.178 0.822 39 H 0.417 0.583 40 H 0.089 0.911 41 H 0.087 0.913 42 H 0.124 0.876 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.480 5.317 1.068 5.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.586 3.414 4 C -0.219 4.219 5 C -0.051 4.051 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.076 4.076 9 C -0.127 4.127 10 C 0.354 3.646 11 O -0.413 6.413 12 N -0.368 5.368 13 C 0.022 3.978 14 H 0.143 0.857 15 C -0.190 4.190 16 C -0.043 4.043 17 H 0.144 0.856 18 C -0.044 4.044 19 N -0.205 5.205 20 C -0.174 4.174 21 C -0.190 4.190 22 N -0.170 5.170 23 C -0.172 4.172 24 C -0.134 4.134 25 C -0.091 4.091 26 C -0.068 4.068 27 H 0.224 0.776 28 H 0.128 0.872 29 H -0.179 1.179 30 H -0.181 1.181 31 H 0.196 0.804 32 H 0.260 0.740 33 H 0.154 0.846 34 H 0.237 0.763 35 H 0.099 0.901 36 H 0.105 0.895 37 H 0.188 0.812 38 H 0.195 0.805 39 H 0.255 0.745 40 H 0.108 0.892 41 H 0.106 0.894 42 H 0.142 0.858 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.023 5.027 0.532 5.158 hybrid contribution 0.824 0.235 1.186 1.463 sum 1.847 5.262 1.717 5.835 Atomic orbital electron populations 1.86505 1.17398 1.81754 1.49039 1.24331 0.84780 1.08870 0.96141 0.95258 0.80730 0.77347 0.88035 1.20736 1.10822 0.92125 0.98213 1.21755 0.99683 0.94360 0.89305 1.41725 1.54614 1.04015 1.18231 1.18078 1.03216 0.86327 0.94888 1.20083 0.99374 0.88073 1.00110 1.19418 1.05113 0.92329 0.95882 1.18198 0.77280 0.84588 0.84568 1.90799 1.44201 1.86199 1.20121 1.45850 1.64311 1.05687 1.20941 1.22479 0.95506 0.79366 1.00426 0.85711 1.23584 0.98857 0.94812 1.01768 1.20768 0.97673 0.92230 0.93596 0.85618 1.22870 0.99018 0.93885 0.88649 1.70255 1.22230 1.08215 1.19783 1.22423 1.03409 1.00917 0.90693 1.22817 1.08162 0.90220 0.97830 1.43268 1.44442 1.17726 1.11522 1.23432 0.97342 0.94059 1.02357 1.20663 1.00638 0.97298 0.94762 1.20201 0.98738 0.90515 0.99674 1.19178 1.00946 0.93085 0.93603 0.77551 0.87173 1.17883 1.18094 0.80412 0.73964 0.84565 0.76258 0.90145 0.89521 0.81154 0.80497 0.74494 0.89231 0.89417 0.85773 0.85239 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.12 12.88 -35.23 -0.45 -0.33 16 2 C -0.03 0.03 3.06 36.01 0.11 0.14 16 3 Si 0.68 -1.57 30.75 -169.99 -5.23 -6.80 16 4 C -0.21 0.09 5.57 -102.74 -0.57 -0.48 16 5 C 0.08 -0.19 10.43 -16.78 -0.18 -0.37 16 6 N -0.58 1.07 6.07 -10.69 -0.06 1.01 16 7 C 0.08 0.07 7.26 -84.00 -0.61 -0.54 16 8 C -0.06 -0.08 9.61 -39.03 -0.37 -0.46 16 9 C -0.12 -0.16 5.87 -104.95 -0.62 -0.78 16 10 C 0.57 1.20 7.76 -12.45 -0.10 1.10 16 11 O -0.54 -3.00 15.91 5.28 0.08 -2.91 16 12 N -0.72 0.69 5.30 -54.04 -0.29 0.41 16 13 C 0.13 -0.15 4.24 -67.11 -0.28 -0.44 16 14 H 0.13 0.02 7.47 -51.93 -0.39 -0.37 16 15 C -0.15 0.30 7.35 -25.92 -0.19 0.11 16 16 C -0.02 0.02 4.29 -90.96 -0.39 -0.37 16 17 H 0.13 -0.11 8.14 -51.93 -0.42 -0.54 16 18 C 0.22 0.31 7.36 -155.42 -1.14 -0.83 16 19 N -0.49 -2.07 11.25 -10.82 -0.12 -2.19 16 20 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 21 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 22 N -0.57 0.37 5.94 -10.23 -0.06 0.31 16 23 C -0.13 0.25 7.38 -25.92 -0.19 0.06 16 24 C -0.11 0.03 9.46 -39.57 -0.37 -0.35 16 25 C -0.07 -0.05 10.03 -39.69 -0.40 -0.44 16 26 C -0.06 -0.08 6.35 -105.05 -0.67 -0.75 16 27 H 0.38 -1.54 8.70 45.56 0.40 -1.15 16 28 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 29 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 30 H -0.26 -0.06 7.11 56.52 0.40 0.35 16 31 H 0.18 -1.10 6.35 -52.49 -0.33 -1.43 16 32 H 0.42 -1.93 8.96 -40.82 -0.37 -2.29 16 33 H 0.14 0.18 7.62 -52.49 -0.40 -0.22 16 34 H 0.40 -1.32 6.72 -40.82 -0.27 -1.59 16 35 H 0.08 -0.25 6.64 -51.93 -0.34 -0.60 16 36 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.17 0.07 8.06 -52.49 -0.42 -0.36 16 38 H 0.18 -0.54 8.06 -52.49 -0.42 -0.97 16 39 H 0.42 -1.42 7.53 -40.82 -0.31 -1.73 16 40 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.09 -0.20 8.07 -51.93 -0.42 -0.62 16 42 H 0.12 -0.38 6.36 -52.49 -0.33 -0.71 16 43 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 LS Contribution 363.22 15.07 5.47 5.47 Total: 0.00 -12.14 363.22 -11.96 -24.10 By element: Atomic # 1 Polarization: -9.27 SS G_CDS: -4.92 Total: -14.19 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -6.39 Total: -4.88 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.53 Total: -0.47 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.37 Total: -3.24 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.23 Total: -6.80 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -12.14 -11.96 -24.10 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.130 kcal (2) G-P(sol) polarization free energy of solvation -12.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.961 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.102 kcal (6) G-S(sol) free energy of system = (1) + (5) 85.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds