Wall clock time and date at job start Tue Mar 9 2021 13:01:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86306 * 109.46963 * 2 1 4 4 C 1.50693 * 109.47137 * 240.00183 * 2 1 3 5 5 C 1.37947 * 119.92133 * 299.99853 * 4 2 1 6 6 C 1.39602 * 119.87228 * 180.02562 * 5 4 2 7 7 C 1.47845 * 120.13756 * 180.02562 * 6 5 4 8 8 O 1.21551 * 120.00273 * 359.97438 * 7 6 5 9 9 N 1.34779 * 119.99939 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00190 * 179.97438 * 9 7 6 11 11 H 1.09003 * 112.85018 * 336.20178 * 10 9 7 12 12 C 1.53952 * 113.73976 * 107.40091 * 10 9 7 13 13 C 1.53786 * 87.02092 * 139.94719 * 12 10 9 14 14 H 1.09003 * 113.60844 * 89.22774 * 13 12 10 15 15 C 1.50692 * 113.61610 * 220.05171 * 13 12 10 16 16 N 1.30501 * 125.64779 * 194.15991 * 15 13 12 17 17 C 1.34134 * 109.25535 * 179.97438 * 16 15 13 18 18 C 1.34668 * 108.01972 * 0.02562 * 17 16 15 19 19 N 1.35044 * 125.65329 * 14.15976 * 15 13 12 20 20 C 1.53775 * 113.61964 * 204.99959 * 10 9 7 21 21 C 1.39544 * 119.72240 * 0.27675 * 6 5 4 22 22 C 1.38073 * 119.84037 * 359.44209 * 21 6 5 23 23 Br 1.89101 * 119.93912 * 180.27761 * 22 21 6 24 24 C 1.38360 * 119.92180 * 120.02047 * 4 2 1 25 25 H 0.96702 * 114.00421 * 60.00064 * 1 2 3 26 26 H 1.08997 * 109.46764 * 119.99696 * 2 1 3 27 27 H 1.48500 * 110.00007 * 298.68019 * 3 2 1 28 28 H 1.48501 * 109.99711 * 59.99817 * 3 2 1 29 29 H 1.07996 * 120.06255 * 0.04177 * 5 4 2 30 30 H 0.97002 * 119.99628 * 0.02562 * 9 7 6 31 31 H 1.09005 * 113.61530 * 25.43085 * 12 10 9 32 32 H 1.09004 * 113.67283 * 254.47322 * 12 10 9 33 33 H 1.08001 * 125.98356 * 179.97438 * 17 16 15 34 34 H 1.08003 * 126.59021 * 180.02562 * 18 17 16 35 35 H 0.96995 * 126.39482 * 359.97438 * 19 15 13 36 36 H 1.09003 * 113.61640 * 105.38926 * 20 10 9 37 37 H 1.08999 * 113.69076 * 334.50228 * 20 10 9 38 38 H 1.07995 * 120.07698 * 179.70898 * 21 6 5 39 39 H 1.08002 * 119.86355 * 359.95583 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2304 5 6 1.5971 -2.0310 -1.4471 6 6 2.0634 -2.6883 -2.5871 7 6 1.7083 -4.1035 -2.8255 8 8 1.0094 -4.6974 -2.0279 9 7 2.1597 -4.7351 -3.9272 10 6 1.8083 -6.1377 -4.1632 11 1 1.5551 -6.6706 -3.2466 12 6 0.7830 -6.3379 -5.2940 13 6 1.6092 -7.5641 -5.7171 14 1 1.3024 -8.4877 -5.2261 15 6 1.7474 -7.7129 -7.2102 16 7 2.1627 -8.7820 -7.8328 17 6 2.1568 -8.5545 -9.1547 18 6 1.7218 -7.2965 -9.3589 19 7 1.4619 -6.7622 -8.1258 20 6 2.8174 -6.8846 -5.0513 21 6 2.8704 -2.0054 -3.4979 22 6 3.1930 -0.6819 -3.2724 23 35 4.2799 0.2485 -4.5089 24 6 2.7270 -0.0365 -2.1399 25 1 -0.3934 0.4417 -0.7650 26 1 1.7922 -0.5138 0.8900 27 1 1.5878 2.4586 -1.2242 28 1 1.5613 2.4679 1.2085 29 1 0.9756 -2.5555 -0.7364 30 1 2.7178 -4.2613 -4.5635 31 1 0.7840 -5.5353 -6.0315 32 1 -0.2171 -6.5867 -4.9389 33 1 2.4504 -9.2568 -9.9208 34 1 1.6006 -6.8040 -10.3125 35 1 1.1334 -5.8679 -7.9436 36 1 3.4573 -7.5739 -4.5005 37 1 3.3764 -6.2327 -5.7226 38 1 3.2382 -2.5096 -4.3793 39 1 2.9855 0.9976 -1.9657 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:10 Heat of formation + Delta-G solvation = 55.791973 kcal Electronic energy + Delta-G solvation = -25042.451222 eV Core-core repulsion = 21192.867486 eV Total energy + Delta-G solvation = -3849.583736 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.037 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.13220 -41.72231 -40.53674 -39.19657 -37.87295 -35.02072 -33.72236 -33.45692 -33.03931 -30.61024 -30.54444 -27.22373 -27.02867 -26.71717 -24.85448 -22.93589 -22.67296 -21.86087 -21.55088 -20.85998 -19.22472 -19.14913 -18.01481 -17.78043 -17.37643 -16.84273 -16.54051 -16.45196 -16.02599 -15.91656 -15.73755 -15.30224 -15.04320 -14.97935 -14.66205 -14.34125 -14.33531 -14.06885 -13.78690 -13.59496 -13.36328 -13.09622 -12.62960 -12.36675 -12.18601 -12.06155 -11.90514 -11.87268 -11.56309 -11.17800 -10.98926 -10.98429 -10.80061 -10.44867 -10.23924 -10.01580 -9.36947 -5.11383 -0.60726 -0.27686 0.30716 1.04023 1.07913 1.44201 1.47653 1.79163 1.86148 2.09759 2.16354 2.38979 3.09135 3.12804 3.20069 3.25232 3.30985 3.43106 3.59451 3.66218 3.73710 3.82168 3.86660 4.08048 4.10948 4.15827 4.32691 4.41295 4.44960 4.45498 4.49186 4.62885 4.64227 4.71764 4.78198 4.82912 4.93978 4.99351 5.12832 5.24747 5.32574 5.78002 6.21793 6.23116 6.33242 6.96456 7.13268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.680 3.320 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.129 4.129 7 C 0.563 3.437 8 O -0.523 6.523 9 N -0.716 5.716 10 C 0.127 3.873 11 H 0.127 0.873 12 C -0.150 4.150 13 C -0.021 4.021 14 H 0.127 0.873 15 C 0.219 3.781 16 N -0.485 5.485 17 C -0.026 4.026 18 C -0.056 4.056 19 N -0.566 5.566 20 C -0.133 4.133 21 C -0.054 4.054 22 C -0.095 4.095 23 Br -0.032 7.032 24 C -0.063 4.063 25 H 0.377 0.623 26 H 0.126 0.874 27 H -0.255 1.255 28 H -0.250 1.250 29 H 0.149 0.851 30 H 0.400 0.600 31 H 0.080 0.920 32 H 0.087 0.913 33 H 0.171 0.829 34 H 0.178 0.822 35 H 0.416 0.584 36 H 0.090 0.910 37 H 0.088 0.912 38 H 0.137 0.863 39 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.514 3.837 -2.502 5.225 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.580 3.420 4 C -0.118 4.118 5 C -0.036 4.036 6 C -0.133 4.133 7 C 0.350 3.650 8 O -0.399 6.399 9 N -0.367 5.367 10 C 0.022 3.978 11 H 0.144 0.856 12 C -0.190 4.190 13 C -0.042 4.042 14 H 0.145 0.855 15 C -0.045 4.045 16 N -0.204 5.204 17 C -0.174 4.174 18 C -0.190 4.190 19 N -0.170 5.170 20 C -0.172 4.172 21 C -0.074 4.074 22 C -0.174 4.174 23 Br 0.053 6.947 24 C -0.082 4.082 25 H 0.225 0.775 26 H 0.144 0.856 27 H -0.180 1.180 28 H -0.175 1.175 29 H 0.167 0.833 30 H 0.236 0.764 31 H 0.099 0.901 32 H 0.106 0.894 33 H 0.189 0.811 34 H 0.195 0.805 35 H 0.255 0.745 36 H 0.109 0.891 37 H 0.106 0.894 38 H 0.155 0.845 39 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.550 3.493 -1.506 4.579 hybrid contribution -1.354 1.044 -1.305 2.151 sum 1.197 4.536 -2.811 5.469 Atomic orbital electron populations 1.86648 1.17154 1.79878 1.49351 1.25058 0.84355 1.11075 0.97878 0.95082 0.91621 0.74256 0.81064 1.20332 0.99223 0.94817 0.97471 1.21313 0.94381 0.92892 0.95012 1.19957 1.01835 0.94294 0.97203 1.18142 0.79682 0.85928 0.81232 1.90833 1.36940 1.66966 1.45194 1.45872 1.53563 1.12786 1.24498 1.22557 0.95432 0.81266 0.98558 0.85556 1.23616 1.00129 0.96882 0.98369 1.20758 0.97794 0.99786 0.85869 0.85538 1.22846 1.03084 0.85448 0.93103 1.70257 1.19526 1.24835 1.05814 1.22431 1.05951 0.95693 0.93331 1.22823 1.09607 0.97321 0.89201 1.43259 1.51571 1.15358 1.06794 1.23434 0.96650 0.99189 0.97947 1.21267 0.95198 0.92538 0.98442 1.21650 1.02974 0.95589 0.97208 1.96854 1.65686 1.75432 1.56680 1.21232 0.95108 1.00015 0.91885 0.77478 0.85591 1.17990 1.17457 0.83308 0.76373 0.90142 0.89391 0.81126 0.80468 0.74534 0.89127 0.89394 0.84486 0.84009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.06 12.76 -35.23 -0.45 -0.51 16 2 C -0.07 0.11 2.82 36.00 0.10 0.21 16 3 Si 0.68 -1.43 29.78 -169.99 -5.06 -6.49 16 4 C -0.12 0.15 5.38 -104.69 -0.56 -0.42 16 5 C -0.02 0.00 9.15 -39.18 -0.36 -0.36 16 6 C -0.13 0.06 5.87 -104.97 -0.62 -0.55 16 7 C 0.56 0.38 7.77 -12.33 -0.10 0.28 16 8 O -0.52 -2.33 15.95 5.32 0.08 -2.24 16 9 N -0.72 1.62 5.31 -53.88 -0.29 1.33 16 10 C 0.13 -0.28 4.24 -67.03 -0.28 -0.56 16 11 H 0.13 -0.10 7.46 -51.93 -0.39 -0.49 16 12 C -0.15 0.42 7.38 -25.83 -0.19 0.23 16 13 C -0.02 0.03 4.28 -90.96 -0.39 -0.36 16 14 H 0.13 -0.19 8.14 -51.93 -0.42 -0.61 16 15 C 0.22 0.19 7.36 -155.42 -1.14 -0.96 16 16 N -0.49 -1.84 11.25 -10.82 -0.12 -1.96 16 17 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 18 C -0.06 0.03 12.04 -16.56 -0.20 -0.17 16 19 N -0.57 0.69 5.94 -10.23 -0.06 0.63 16 20 C -0.13 0.36 7.38 -25.92 -0.19 0.17 16 21 C -0.05 0.11 9.28 -39.16 -0.36 -0.25 16 22 C -0.09 0.14 6.22 -39.57 -0.25 -0.10 16 23 Br -0.03 0.04 33.69 -68.01 -2.29 -2.25 16 24 C -0.06 0.11 8.41 -39.46 -0.33 -0.22 16 25 H 0.38 -1.04 8.70 45.56 0.40 -0.65 16 26 H 0.13 -0.29 7.96 -51.93 -0.41 -0.70 16 27 H -0.26 0.09 7.11 56.52 0.40 0.49 16 28 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 29 H 0.15 0.15 7.65 -52.49 -0.40 -0.25 16 30 H 0.40 -1.86 6.76 -40.82 -0.28 -2.14 16 31 H 0.08 -0.32 6.64 -51.93 -0.34 -0.66 16 32 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.17 0.00 8.06 -52.49 -0.42 -0.42 16 34 H 0.18 -0.62 8.06 -52.48 -0.42 -1.05 16 35 H 0.42 -1.68 7.54 -40.82 -0.31 -1.99 16 36 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.09 -0.28 8.07 -51.93 -0.42 -0.70 16 38 H 0.14 -0.61 6.40 -52.49 -0.34 -0.94 16 39 H 0.14 -0.43 4.86 -52.49 -0.26 -0.68 16 LS Contribution 350.95 15.07 5.29 5.29 Total: 0.00 -9.47 350.95 -12.04 -21.51 By element: Atomic # 1 Polarization: -7.94 SS G_CDS: -4.06 Total: -11.99 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -5.08 Total: -3.32 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.47 Total: 0.00 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -0.36 Total: -2.75 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.06 Total: -6.49 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.25 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -9.47 -12.04 -21.51 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.303 kcal (2) G-P(sol) polarization free energy of solvation -9.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.039 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.511 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds