Wall clock time and date at job start Tue Mar 9 2021 13:02:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47464 * 2 1 4 4 C 1.50699 * 109.47117 * 120.00408 * 2 1 3 5 5 C 1.31109 * 118.54758 * 249.97511 * 4 2 1 6 6 N 1.38927 * 121.85201 * 180.40657 * 5 4 2 7 7 C 1.47039 * 119.00485 * 346.83914 * 6 5 4 8 8 C 1.50698 * 109.96745 * 162.97788 * 7 6 5 9 9 O 1.21280 * 120.00255 * 341.71151 * 8 7 6 10 10 N 1.34776 * 120.00071 * 161.71014 * 8 7 6 11 11 C 1.46496 * 120.00293 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.85072 * 334.67258 * 11 10 8 13 13 C 1.53785 * 113.61439 * 105.86570 * 11 10 8 14 14 C 1.53956 * 87.01924 * 139.95672 * 13 11 10 15 15 H 1.08995 * 113.54044 * 89.19341 * 14 13 11 16 16 C 1.50704 * 113.74039 * 220.05908 * 14 13 11 17 17 N 1.30495 * 125.65181 * 192.62188 * 16 14 13 18 18 C 1.34120 * 109.26039 * 180.02562 * 17 16 14 19 19 C 1.34676 * 108.02028 * 359.97438 * 18 17 16 20 20 N 1.35045 * 125.64852 * 12.31491 * 16 14 13 21 21 C 1.53775 * 113.61935 * 203.47575 * 11 10 8 22 22 C 1.53544 * 107.65072 * 43.35951 * 7 6 5 23 23 C 1.50211 * 118.54543 * 69.99560 * 4 2 1 24 24 H 0.96702 * 113.99759 * 299.99742 * 1 2 3 25 25 H 1.09001 * 109.46558 * 240.00317 * 2 1 3 26 26 H 1.48498 * 110.00066 * 300.00580 * 3 2 1 27 27 H 1.48503 * 109.99698 * 61.32170 * 3 2 1 28 28 H 1.08007 * 119.07550 * 0.38210 * 5 4 2 29 29 H 0.96996 * 120.56218 * 166.66438 * 6 5 4 30 30 H 1.08995 * 109.68394 * 283.90464 * 7 6 5 31 31 H 0.96997 * 119.99971 * 0.02562 * 10 8 7 32 32 H 1.08998 * 113.61165 * 254.53537 * 13 11 10 33 33 H 1.08996 * 113.61081 * 25.43274 * 13 11 10 34 34 H 1.07998 * 125.99675 * 180.02562 * 18 17 16 35 35 H 1.07996 * 126.59356 * 180.02562 * 19 18 17 36 36 H 0.97003 * 126.39935 * 359.97438 * 20 16 14 37 37 H 1.09002 * 113.61186 * 334.56667 * 21 11 10 38 38 H 1.08998 * 113.61807 * 105.46808 * 21 11 10 39 39 H 1.09002 * 109.62230 * 179.50008 * 22 7 6 40 40 H 1.09001 * 109.62032 * 59.12934 * 22 7 6 41 41 H 1.09005 * 109.32529 * 39.69287 * 23 4 2 42 42 H 1.08994 * 109.19351 * 280.11665 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.5120 -0.0031 2.1692 6 7 3.0076 -0.5884 3.3276 7 6 2.6275 -1.9727 3.6458 8 6 3.5699 -2.5415 4.6751 9 8 4.6469 -2.0176 4.8664 10 7 3.2160 -3.6324 5.3830 11 6 4.1323 -4.1857 6.3831 12 1 5.1761 -3.9470 6.1789 13 6 3.7073 -3.8996 7.8331 14 6 4.1536 -5.3358 8.1624 15 1 5.2033 -5.4113 8.4460 16 6 3.2359 -6.0519 9.1196 17 7 3.5018 -7.1720 9.7340 18 6 2.4578 -7.5129 10.5039 19 6 1.5090 -6.5678 10.3616 20 7 2.0044 -5.6377 9.4879 21 6 3.8886 -5.6736 6.6857 22 6 2.7177 -2.7901 2.3492 23 6 1.7450 -2.1979 1.3267 24 1 -0.3933 0.4417 0.7651 25 1 1.7922 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2084 27 1 1.5880 2.4585 1.2243 28 1 2.6081 1.0647 2.0382 29 1 3.5976 -0.0931 3.9170 30 1 1.6063 -1.9948 4.0264 31 1 2.3548 -4.0516 5.2297 32 1 4.3082 -3.1320 8.3208 33 1 2.6358 -3.7376 7.9501 34 1 2.3901 -8.3909 11.1291 35 1 0.5445 -6.5455 10.8470 36 1 1.5541 -4.8327 9.1878 37 1 2.8667 -5.9976 6.4885 38 1 4.6356 -6.3362 6.2485 39 1 2.4500 -3.8273 2.5509 40 1 3.7338 -2.7438 1.9573 41 1 1.9285 -2.6483 0.3512 42 1 0.7220 -2.4116 1.6362 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_15413834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:44 Heat of formation + Delta-G solvation = 43.427391 kcal Electronic energy + Delta-G solvation = -24516.471575 eV Core-core repulsion = 20886.120805 eV Total energy + Delta-G solvation = -3630.350770 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.153 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -43.15096 -41.60190 -40.21039 -39.07044 -37.42958 -34.94242 -33.47694 -33.29065 -32.97661 -30.63786 -27.86663 -27.05225 -26.06625 -25.35612 -23.77894 -22.71871 -22.05705 -21.61619 -20.92958 -19.47780 -19.19264 -19.05999 -18.08921 -17.43539 -16.86086 -16.72073 -16.37332 -16.08739 -15.91248 -15.73268 -15.25827 -15.24552 -14.98509 -14.74450 -14.57044 -14.31252 -14.06025 -13.96306 -13.81030 -13.54507 -13.07745 -12.96183 -12.65657 -12.33697 -12.21484 -12.01607 -11.90004 -11.64707 -11.32432 -11.01443 -11.00459 -10.90630 -10.32573 -10.28162 -9.39050 -8.53804 -4.90866 1.01939 1.25892 1.37524 1.39968 1.58542 1.71415 2.01756 2.06610 2.14629 2.52655 3.09585 3.21382 3.37829 3.40316 3.51821 3.58332 3.67174 3.76929 3.80249 3.89385 4.06191 4.18446 4.30012 4.31188 4.41508 4.43583 4.46265 4.53102 4.60977 4.65211 4.68874 4.70129 4.75769 4.91996 4.94776 5.10653 5.13318 5.21335 5.26994 5.49014 5.76023 6.11026 6.28108 6.31156 6.56366 6.75109 6.95022 7.11243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.051 4.051 3 Si 0.670 3.330 4 C -0.276 4.276 5 C 0.138 3.862 6 N -0.732 5.732 7 C 0.136 3.864 8 C 0.514 3.486 9 O -0.526 6.526 10 N -0.717 5.717 11 C 0.127 3.873 12 H 0.124 0.876 13 C -0.150 4.150 14 C -0.022 4.022 15 H 0.126 0.874 16 C 0.219 3.781 17 N -0.485 5.485 18 C -0.026 4.026 19 C -0.056 4.056 20 N -0.566 5.566 21 C -0.132 4.132 22 C -0.127 4.127 23 C -0.051 4.051 24 H 0.371 0.629 25 H 0.110 0.890 26 H -0.260 1.260 27 H -0.265 1.265 28 H 0.135 0.865 29 H 0.409 0.591 30 H 0.089 0.911 31 H 0.403 0.597 32 H 0.086 0.914 33 H 0.080 0.920 34 H 0.172 0.828 35 H 0.178 0.822 36 H 0.416 0.584 37 H 0.088 0.912 38 H 0.089 0.911 39 H 0.078 0.922 40 H 0.078 0.922 41 H 0.076 0.924 42 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.256 -0.132 1.209 2.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.162 4.162 3 Si 0.573 3.427 4 C -0.287 4.287 5 C 0.018 3.982 6 N -0.365 5.365 7 C 0.026 3.974 8 C 0.300 3.700 9 O -0.401 6.401 10 N -0.368 5.368 11 C 0.022 3.978 12 H 0.142 0.858 13 C -0.190 4.190 14 C -0.042 4.042 15 H 0.144 0.856 16 C -0.045 4.045 17 N -0.204 5.204 18 C -0.174 4.174 19 C -0.190 4.190 20 N -0.170 5.170 21 C -0.171 4.171 22 C -0.166 4.166 23 C -0.088 4.088 24 H 0.218 0.782 25 H 0.128 0.872 26 H -0.186 1.186 27 H -0.190 1.190 28 H 0.151 0.849 29 H 0.246 0.754 30 H 0.106 0.894 31 H 0.238 0.762 32 H 0.105 0.895 33 H 0.099 0.901 34 H 0.189 0.811 35 H 0.195 0.805 36 H 0.255 0.745 37 H 0.107 0.893 38 H 0.108 0.892 39 H 0.097 0.903 40 H 0.097 0.903 41 H 0.094 0.906 42 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -0.903 0.164 0.768 1.197 hybrid contribution -2.460 0.583 0.866 2.672 sum -3.363 0.747 1.634 3.812 Atomic orbital electron populations 1.86581 1.18777 1.79803 1.49116 1.24725 0.83237 1.09394 0.98808 0.95266 0.92095 0.75634 0.79668 1.20907 1.13599 0.96178 0.97967 1.20505 0.95128 0.96460 0.86118 1.44276 1.54862 1.12160 1.25166 1.20990 0.97135 0.84544 0.94699 1.20650 0.87664 0.80512 0.81194 1.90746 1.23029 1.59537 1.66831 1.45912 1.21121 1.30072 1.39687 1.22497 0.95983 0.93186 0.86175 0.85816 1.23603 1.01826 0.96564 0.96971 1.20785 0.98634 0.93553 0.91262 0.85625 1.22847 0.85983 0.94348 1.01330 1.70246 1.27890 1.11787 1.10512 1.22432 0.90696 1.01352 1.02911 1.22829 1.02339 0.93283 1.00515 1.43264 1.15583 1.21803 1.36336 1.23418 1.03536 0.95940 0.94217 1.21876 1.02040 0.98541 0.94112 1.19938 0.98327 0.91670 0.98910 0.78174 0.87229 1.18566 1.19036 0.84852 0.75403 0.89385 0.76206 0.89516 0.90137 0.81111 0.80458 0.74531 0.89347 0.89191 0.90344 0.90281 0.90591 0.91594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.77 12.88 -35.23 -0.45 -1.23 16 2 C -0.05 0.01 2.81 36.01 0.10 0.11 16 3 Si 0.67 -0.45 29.96 -169.99 -5.09 -5.54 16 4 C -0.28 0.14 5.37 -101.33 -0.54 -0.40 16 5 C 0.14 -0.11 9.62 -16.08 -0.15 -0.26 16 6 N -0.73 0.51 5.47 -55.34 -0.30 0.21 16 7 C 0.14 -0.25 3.36 -68.51 -0.23 -0.48 16 8 C 0.51 -0.37 7.10 -10.99 -0.08 -0.45 16 9 O -0.53 -1.64 15.69 5.56 0.09 -1.55 16 10 N -0.72 2.39 5.36 -53.02 -0.28 2.10 16 11 C 0.13 -0.36 4.21 -67.12 -0.28 -0.64 16 12 H 0.12 -0.15 7.50 -51.93 -0.39 -0.54 16 13 C -0.15 0.49 7.37 -25.82 -0.19 0.30 16 14 C -0.02 0.04 4.29 -90.86 -0.39 -0.35 16 15 H 0.13 -0.22 8.14 -51.93 -0.42 -0.64 16 16 C 0.22 0.13 7.37 -155.42 -1.15 -1.01 16 17 N -0.49 -1.74 11.25 -10.82 -0.12 -1.87 16 18 C -0.03 -0.04 11.87 -17.81 -0.21 -0.26 16 19 C -0.06 0.04 12.04 -16.56 -0.20 -0.16 16 20 N -0.57 0.81 5.94 -10.23 -0.06 0.75 16 21 C -0.13 0.41 7.38 -25.92 -0.19 0.22 16 22 C -0.13 0.25 5.46 -26.43 -0.14 0.10 16 23 C -0.05 0.05 5.86 -28.10 -0.16 -0.11 16 24 H 0.37 -0.52 8.70 45.56 0.40 -0.12 16 25 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 26 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 27 H -0.26 -0.25 6.83 56.52 0.39 0.13 16 28 H 0.13 -0.24 4.31 -52.48 -0.23 -0.46 16 29 H 0.41 -0.20 8.09 -40.82 -0.33 -0.53 16 30 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 31 H 0.40 -2.31 8.71 -40.82 -0.36 -2.66 16 32 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 33 H 0.08 -0.36 6.66 -51.93 -0.35 -0.70 16 34 H 0.17 -0.03 8.06 -52.49 -0.42 -0.45 16 35 H 0.18 -0.65 8.06 -52.49 -0.42 -1.08 16 36 H 0.42 -1.78 7.55 -40.82 -0.31 -2.09 16 37 H 0.09 -0.31 8.06 -51.93 -0.42 -0.73 16 38 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 40 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 42 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 343.37 15.07 5.17 5.17 Total: 0.00 -9.50 343.37 -10.71 -20.21 By element: Atomic # 1 Polarization: -9.04 SS G_CDS: -5.83 Total: -14.87 kcal Atomic # 6 Polarization: 0.43 SS G_CDS: -3.82 Total: -3.40 kcal Atomic # 7 Polarization: 1.97 SS G_CDS: -0.77 Total: 1.20 kcal Atomic # 8 Polarization: -2.41 SS G_CDS: -0.37 Total: -2.78 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.09 Total: -5.54 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -9.50 -10.71 -20.21 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_15413834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.640 kcal (2) G-P(sol) polarization free energy of solvation -9.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.712 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.212 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds