Wall clock time and date at job start Tue Mar 9 2021 13:03:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47045 * 2 1 4 4 C 1.50695 * 109.47176 * 239.99576 * 2 1 3 5 5 C 1.38259 * 119.94651 * 299.99880 * 4 2 1 6 6 C 1.38150 * 120.05565 * 179.97438 * 5 4 2 7 7 C 1.38732 * 119.94227 * 0.02562 * 6 5 4 8 8 O 1.35897 * 120.05484 * 179.97438 * 7 6 5 9 9 C 1.42897 * 117.00244 * 180.02562 * 8 7 6 10 10 F 1.39897 * 109.47222 * 60.00155 * 9 8 7 11 11 F 1.39906 * 109.47018 * 300.00094 * 9 8 7 12 12 C 1.50701 * 109.47235 * 180.02562 * 9 8 7 13 13 O 1.21276 * 119.99961 * 359.97438 * 12 9 8 14 14 N 1.34779 * 119.99810 * 180.02562 * 12 9 8 15 15 C 1.46500 * 119.99895 * 180.02562 * 14 12 9 16 16 H 1.09003 * 112.85046 * 336.19048 * 15 14 12 17 17 C 1.53775 * 113.61656 * 107.50207 * 15 14 12 18 18 C 1.53779 * 87.08438 * 139.98199 * 17 15 14 19 19 H 1.09002 * 113.61731 * 89.11293 * 18 17 15 20 20 C 1.50701 * 113.68876 * 220.00680 * 18 17 15 21 21 N 1.30500 * 125.64785 * 193.75491 * 20 18 17 22 22 C 1.34133 * 109.25501 * 179.89836 * 21 20 18 23 23 C 1.34669 * 108.01736 * 0.36335 * 22 21 20 24 24 N 1.35042 * 125.65001 * 14.06493 * 20 18 17 25 25 C 1.53777 * 113.61534 * 204.99945 * 15 14 12 26 26 C 1.38732 * 119.88834 * 0.27402 * 7 6 5 27 27 C 1.38145 * 119.94496 * 359.42622 * 26 7 6 28 28 H 0.96698 * 114.00683 * 300.00220 * 1 2 3 29 29 H 1.09004 * 109.46471 * 119.99761 * 2 1 3 30 30 H 1.48497 * 109.99921 * 178.67621 * 3 2 1 31 31 H 1.48498 * 110.00196 * 299.99732 * 3 2 1 32 32 H 1.08003 * 119.97657 * 359.97438 * 5 4 2 33 33 H 1.08000 * 120.02488 * 180.02562 * 6 5 4 34 34 H 0.97002 * 120.00021 * 359.97438 * 14 12 9 35 35 H 1.08993 * 113.61636 * 25.42563 * 17 15 14 36 36 H 1.09008 * 113.61006 * 254.52805 * 17 15 14 37 37 H 1.07999 * 125.98736 * 180.12072 * 22 21 20 38 38 H 1.08002 * 126.58590 * 179.74691 * 23 22 21 39 39 H 0.96999 * 126.40074 * 359.93798 * 24 20 18 40 40 H 1.08997 * 113.61941 * 105.46412 * 25 15 14 41 41 H 1.09009 * 113.68972 * 334.57492 * 25 15 14 42 42 H 1.08002 * 120.02520 * 179.71680 * 26 7 6 43 43 H 1.07996 * 119.96983 * 180.27260 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5967 -2.0342 -1.4479 6 6 2.0555 -2.6876 -2.5754 7 6 2.8531 -2.0144 -3.4893 8 8 3.3062 -2.6551 -4.5989 9 6 4.1231 -1.9001 -5.4959 10 9 5.2675 -1.4573 -4.8240 11 9 3.4025 -0.7970 -5.9666 12 6 4.5274 -2.7687 -6.6591 13 8 4.1534 -3.9210 -6.7142 14 7 5.3057 -2.2653 -7.6376 15 6 5.6984 -3.1095 -8.7686 16 1 5.6722 -4.1733 -8.5319 17 6 4.9838 -2.7510 -10.0822 18 6 6.3278 -2.9955 -10.7884 19 1 6.4731 -4.0283 -11.1053 20 6 6.6280 -2.0008 -11.8800 21 7 7.5573 -2.1250 -12.7877 22 6 7.5345 -1.0531 -13.5937 23 6 6.5590 -0.2299 -13.1644 24 7 5.9837 -0.8305 -12.0773 25 6 7.0032 -2.6616 -9.4478 26 6 3.1926 -0.6880 -3.2655 27 6 2.7262 -0.0373 -2.1397 28 1 -0.3934 0.4417 0.7650 29 1 1.7922 -0.5138 0.8901 30 1 3.5345 1.7703 0.0322 31 1 1.5615 2.4679 -1.2085 32 1 0.9760 -2.5579 -0.7360 33 1 1.7934 -3.7214 -2.7451 34 1 5.6052 -1.3437 -7.5932 35 1 4.6485 -1.7150 -10.1282 36 1 4.2067 -3.4615 -10.3645 37 1 8.1869 -0.8789 -14.4365 38 1 6.2840 0.7217 -13.5949 39 1 5.2499 -0.4809 -11.5478 40 1 7.8565 -3.2996 -9.2180 41 1 7.2214 -1.6011 -9.3210 42 1 3.8172 -0.1632 -3.9733 43 1 2.9866 0.9965 -1.9674 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:27 Heat of formation + Delta-G solvation = -73.232474 kcal Electronic energy + Delta-G solvation = -32280.952515 eV Core-core repulsion = 27352.464099 eV Total energy + Delta-G solvation = -4928.488416 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.122 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -51.00912 -48.98227 -43.13980 -41.61817 -41.35578 -39.71780 -39.15131 -37.31289 -35.22718 -33.48659 -32.65262 -32.22969 -30.81094 -29.22130 -26.91862 -26.63978 -25.85145 -24.60813 -23.00473 -22.62658 -22.43962 -21.73412 -21.09250 -20.68902 -19.80939 -19.72127 -19.12200 -18.39626 -18.20447 -17.54706 -17.13476 -16.69212 -16.61986 -16.45403 -16.38164 -15.89115 -15.85724 -15.82772 -15.50998 -15.39835 -15.23201 -15.01912 -14.95611 -14.70065 -14.55155 -14.43352 -14.18420 -14.00540 -13.73794 -13.69594 -13.61802 -13.25717 -12.68963 -12.57602 -12.27667 -12.15097 -11.98290 -11.86515 -11.63109 -11.06832 -11.04327 -10.58064 -10.38109 -10.33479 -9.67847 -9.38341 -4.97188 -0.12611 -0.02006 0.35958 0.52993 1.06023 1.27707 1.55847 1.61462 1.89175 1.94182 2.09298 2.17085 2.29970 2.66442 3.09946 3.19608 3.26158 3.29589 3.39897 3.44547 3.50838 3.67472 3.81272 3.88703 3.92291 4.08861 4.21335 4.24720 4.38304 4.44893 4.49401 4.51688 4.53200 4.63465 4.66443 4.74715 4.77160 4.85127 4.86977 4.91990 5.09194 5.19711 5.22000 5.26571 5.67932 5.75356 5.76660 6.35312 6.45422 6.90690 7.10694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.074 4.074 3 Si 0.770 3.230 4 C -0.109 4.109 5 C -0.053 4.053 6 C -0.130 4.130 7 C 0.087 3.913 8 O -0.301 6.301 9 C 0.430 3.570 10 F -0.173 7.173 11 F -0.173 7.173 12 C 0.521 3.479 13 O -0.501 6.501 14 N -0.675 5.675 15 C 0.122 3.878 16 H 0.124 0.876 17 C -0.141 4.141 18 C -0.021 4.021 19 H 0.126 0.874 20 C 0.211 3.789 21 N -0.530 5.530 22 C -0.063 4.063 23 C -0.042 4.042 24 N -0.557 5.557 25 C -0.121 4.121 26 C -0.193 4.193 27 C -0.101 4.101 28 H 0.405 0.595 29 H 0.102 0.898 30 H -0.288 1.288 31 H -0.298 1.298 32 H 0.162 0.838 33 H 0.155 0.845 34 H 0.423 0.577 35 H 0.100 0.900 36 H 0.091 0.909 37 H 0.177 0.823 38 H 0.209 0.791 39 H 0.431 0.569 40 H 0.095 0.905 41 H 0.100 0.900 42 H 0.139 0.861 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.552 5.444 3.671 6.747 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.184 4.184 3 Si 0.677 3.323 4 C -0.109 4.109 5 C -0.071 4.071 6 C -0.148 4.148 7 C 0.044 3.956 8 O -0.217 6.217 9 C 0.352 3.648 10 F -0.154 7.154 11 F -0.155 7.155 12 C 0.299 3.701 13 O -0.374 6.374 14 N -0.328 5.328 15 C 0.019 3.981 16 H 0.142 0.858 17 C -0.180 4.180 18 C -0.042 4.042 19 H 0.144 0.856 20 C -0.054 4.054 21 N -0.250 5.250 22 C -0.210 4.210 23 C -0.177 4.177 24 N -0.162 5.162 25 C -0.160 4.160 26 C -0.212 4.212 27 C -0.118 4.118 28 H 0.257 0.743 29 H 0.120 0.880 30 H -0.215 1.215 31 H -0.226 1.226 32 H 0.180 0.820 33 H 0.173 0.827 34 H 0.261 0.739 35 H 0.118 0.882 36 H 0.109 0.891 37 H 0.194 0.806 38 H 0.225 0.775 39 H 0.272 0.728 40 H 0.114 0.886 41 H 0.118 0.882 42 H 0.157 0.843 43 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -0.700 4.079 2.498 4.834 hybrid contribution -0.309 1.254 -0.290 1.323 sum -1.009 5.332 2.208 5.859 Atomic orbital electron populations 1.86433 1.16922 1.82407 1.51533 1.24730 0.86089 1.10655 0.96904 0.94391 0.77341 0.75698 0.84876 1.19803 0.99048 0.95217 0.96882 1.21154 0.96557 0.93356 0.96055 1.20832 0.98593 1.01975 0.93402 1.19172 0.97461 0.92029 0.86952 1.86643 1.63906 1.39090 1.32106 1.21945 0.76661 0.79563 0.86588 1.93194 1.50687 1.89880 1.81666 1.93193 1.78248 1.55557 1.88452 1.19326 0.81082 0.87046 0.82621 1.90863 1.53339 1.17029 1.76187 1.45763 1.48891 1.17104 1.21034 1.22812 0.95979 0.96773 0.82544 0.85778 1.23582 0.96752 1.03934 0.93698 1.20761 0.97256 0.97357 0.88796 0.85617 1.23108 0.93591 0.89206 0.99455 1.70182 1.21692 1.26544 1.06626 1.22747 1.02606 0.92723 1.02919 1.23277 0.99411 1.02442 0.92527 1.43246 1.30125 1.17221 1.25565 1.23416 0.96843 1.03724 0.92036 1.21499 1.04901 0.93842 1.00930 1.20823 0.98083 0.99147 0.93771 0.74334 0.88012 1.21529 1.22640 0.82031 0.82705 0.73871 0.88205 0.89065 0.80612 0.77451 0.72799 0.88637 0.88162 0.84349 0.85598 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.98 12.74 -148.98 -1.90 -0.92 16 2 C -0.07 0.13 2.81 71.23 0.20 0.33 16 3 Si 0.77 -1.98 29.78 68.60 2.04 0.06 16 4 C -0.11 -0.49 5.42 -19.85 -0.11 -0.60 16 5 C -0.05 -0.18 9.60 22.25 0.21 0.03 16 6 C -0.13 -0.70 9.99 22.37 0.22 -0.48 16 7 C 0.09 0.73 6.48 22.51 0.15 0.87 16 8 O -0.30 -2.78 9.60 -73.36 -0.70 -3.49 16 9 C 0.43 1.97 2.05 71.24 0.15 2.12 16 10 F -0.17 -0.60 15.28 44.97 0.69 0.09 16 11 F -0.17 -0.56 15.31 44.97 0.69 0.13 16 12 C 0.52 1.69 7.34 87.66 0.64 2.33 16 13 O -0.50 -5.08 16.10 16.02 0.26 -4.83 16 14 N -0.67 3.10 5.35 -440.05 -2.36 0.74 16 15 C 0.12 -0.70 4.24 45.51 0.19 -0.51 16 16 H 0.12 -0.41 7.46 -2.39 -0.02 -0.43 16 17 C -0.14 1.03 7.36 31.12 0.23 1.26 16 18 C -0.02 0.09 4.29 -11.01 -0.05 0.04 16 19 H 0.13 -0.48 8.14 -2.39 -0.02 -0.50 16 20 C 0.21 0.21 7.36 138.13 1.02 1.23 16 21 N -0.53 -4.15 11.25 -188.13 -2.12 -6.27 16 22 C -0.06 -0.25 11.87 83.52 0.99 0.74 16 23 C -0.04 0.09 12.04 83.09 1.00 1.09 16 24 N -0.56 2.13 5.94 -186.27 -1.11 1.02 16 25 C -0.12 0.84 7.38 31.12 0.23 1.07 16 26 C -0.19 -1.44 8.26 22.37 0.18 -1.26 16 27 C -0.10 -0.66 8.66 22.25 0.19 -0.47 16 28 H 0.41 -4.98 8.74 -74.06 -0.65 -5.62 16 29 H 0.10 -0.65 7.96 -2.39 -0.02 -0.67 16 30 H -0.29 -0.81 7.11 99.48 0.71 -0.11 16 31 H -0.30 -1.59 7.11 99.48 0.71 -0.88 16 32 H 0.16 -0.19 8.06 -2.91 -0.02 -0.21 16 33 H 0.16 0.32 8.06 -2.91 -0.02 0.30 16 34 H 0.42 -4.10 8.73 -92.71 -0.81 -4.91 16 35 H 0.10 -1.05 6.65 -2.39 -0.02 -1.07 16 36 H 0.09 -0.58 8.14 -2.38 -0.02 -0.60 16 37 H 0.18 0.17 8.06 -2.91 -0.02 0.14 16 38 H 0.21 -1.90 8.06 -2.91 -0.02 -1.92 16 39 H 0.43 -4.37 7.55 -92.71 -0.70 -5.07 16 40 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 41 H 0.10 -0.85 8.07 -2.38 -0.02 -0.87 16 42 H 0.14 0.76 5.10 -2.91 -0.01 0.74 16 43 H 0.13 0.64 4.87 -2.91 -0.01 0.63 16 Total: 0.00 -27.31 372.53 -0.05 -27.36 By element: Atomic # 1 Polarization: -20.70 SS G_CDS: -1.00 Total: -21.70 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: 5.45 Total: 7.81 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -5.58 Total: -4.51 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -2.34 Total: -9.24 kcal Atomic # 9 Polarization: -1.16 SS G_CDS: 1.38 Total: 0.22 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: 2.04 Total: 0.06 kcal Total: -27.31 -0.05 -27.36 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.873 kcal (2) G-P(sol) polarization free energy of solvation -27.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.048 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.360 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds