Wall clock time and date at job start Tue Mar 9 2021 13:03:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35897 * 116.99549 * 2 1 4 4 C 1.38619 * 120.02655 * 180.02562 * 3 2 1 5 5 C 1.38651 * 119.89038 * 179.97438 * 4 3 2 6 6 O 1.35901 * 120.02697 * 179.97438 * 5 4 3 7 7 C 1.42895 * 116.99731 * 0.02562 * 6 5 4 8 8 C 1.50699 * 109.47193 * 179.97438 * 7 6 5 9 9 O 1.21279 * 119.99940 * 0.02562 * 8 7 6 10 10 N 1.34782 * 120.00545 * 179.97438 * 8 7 6 11 11 C 1.46493 * 120.00293 * 180.02562 * 10 8 7 12 12 H 1.09005 * 112.90733 * 336.25350 * 11 10 8 13 13 C 1.53784 * 113.61452 * 107.50236 * 11 10 8 14 14 C 1.53781 * 87.07940 * 139.98327 * 13 11 10 15 15 H 1.09000 * 113.69569 * 89.12968 * 14 13 11 16 16 C 1.50706 * 113.61233 * 220.02279 * 14 13 11 17 17 N 1.30498 * 125.64721 * 192.52364 * 16 14 13 18 18 C 1.34125 * 109.25251 * 179.97438 * 17 16 14 19 19 C 1.34667 * 108.02552 * 359.97438 * 18 17 16 20 20 N 1.35040 * 125.65220 * 12.21309 * 16 14 13 21 21 C 1.53776 * 113.61503 * 204.99996 * 11 10 8 22 22 C 1.38747 * 119.94577 * 0.27501 * 5 4 3 23 23 C 1.50699 * 119.97348 * 179.69812 * 22 5 4 24 24 O 1.42904 * 109.47135 * 75.00299 * 23 22 5 25 25 Si 1.86303 * 109.47387 * 194.99895 * 23 22 5 26 26 C 1.38197 * 120.05560 * 359.44868 * 22 5 4 27 27 C 1.38157 * 120.10782 * 0.55294 * 26 22 5 28 28 H 1.08993 * 109.47364 * 300.00014 * 1 2 3 29 29 H 1.09002 * 109.47169 * 60.00785 * 1 2 3 30 30 H 1.09005 * 109.46900 * 179.97438 * 1 2 3 31 31 H 1.07996 * 120.05135 * 359.97438 * 4 3 2 32 32 H 1.09004 * 109.47346 * 59.99927 * 7 6 5 33 33 H 1.09001 * 109.47221 * 299.99585 * 7 6 5 34 34 H 0.96997 * 119.99402 * 0.02562 * 10 8 7 35 35 H 1.08996 * 113.60998 * 25.43447 * 13 11 10 36 36 H 1.08997 * 113.61611 * 254.52773 * 13 11 10 37 37 H 1.08010 * 125.98920 * 180.02562 * 18 17 16 38 38 H 1.07997 * 126.59535 * 180.02562 * 19 18 17 39 39 H 0.97005 * 126.39204 * 359.97438 * 20 16 14 40 40 H 1.09011 * 113.61528 * 105.46764 * 21 11 10 41 41 H 1.09003 * 113.69414 * 334.57926 * 21 11 10 42 42 H 1.08995 * 109.47550 * 315.00363 * 23 22 5 43 43 H 0.96699 * 114.00592 * 180.02562 * 24 23 22 44 44 H 1.48497 * 109.99854 * 178.68211 * 25 23 22 45 45 H 1.48497 * 110.00332 * 300.00304 * 25 23 22 46 46 H 1.08007 * 119.94826 * 180.27409 * 26 22 5 47 47 H 1.08001 * 119.97488 * 179.70812 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0005 5 6 4.0566 2.5211 -0.0011 6 8 5.4135 2.5962 -0.0011 7 6 6.1315 1.3608 -0.0011 8 6 7.6123 1.6404 -0.0017 9 8 8.0133 2.7850 -0.0017 10 7 8.4912 0.6186 -0.0013 11 6 9.9307 0.8904 -0.0014 12 1 10.1771 1.8721 -0.4060 13 6 10.6146 0.5889 1.3426 14 6 11.7873 0.0177 0.5280 15 1 12.5421 0.7597 0.2675 16 6 12.3787 -1.2362 1.1190 17 7 13.5083 -1.7848 0.7639 18 6 13.7168 -2.8851 1.5020 19 6 12.6772 -3.0233 2.3469 20 7 11.8305 -1.9749 2.1076 21 6 10.7730 -0.2503 -0.5964 22 6 3.2969 3.6822 0.0047 23 6 3.9772 5.0269 0.0110 24 8 4.5030 5.3009 -1.2893 25 14 2.7437 6.3447 0.4722 26 6 1.9171 3.6065 -0.0005 27 6 1.2905 2.3752 0.0000 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5137 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 4.0196 0.3793 -0.0005 32 1 5.8699 0.7884 -0.8911 33 1 5.8699 0.7885 0.8889 34 1 8.1705 -0.2969 -0.0010 35 1 10.0928 -0.1588 1.9399 36 1 10.8724 1.4821 1.9115 37 1 14.5694 -3.5444 1.4318 38 1 12.5400 -3.8082 3.0759 39 1 10.9925 -1.7963 2.5624 40 1 11.1586 -0.0344 -1.5929 41 1 10.2957 -1.2279 -0.5299 42 1 4.7898 5.0197 0.7373 43 1 4.9561 6.1523 -1.3590 44 1 3.4094 7.6715 0.5130 45 1 1.6306 6.3650 -0.5105 46 1 1.3275 4.5115 -0.0005 47 1 0.2119 2.3186 0.0007 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:42 Heat of formation + Delta-G solvation = -11.124056 kcal Electronic energy + Delta-G solvation = -31196.649547 eV Core-core repulsion = 26735.542495 eV Total energy + Delta-G solvation = -4461.107052 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.12728 -41.80667 -41.12279 -40.09595 -39.20329 -38.08655 -36.98059 -34.82051 -33.44941 -32.36669 -31.52260 -30.72790 -29.43182 -28.50306 -27.00988 -26.05555 -26.00120 -23.74260 -22.67438 -22.35279 -21.93194 -21.57593 -20.84333 -19.90940 -19.12411 -18.42408 -18.36354 -17.85932 -17.47867 -17.29833 -17.03183 -16.82441 -16.73563 -16.53617 -15.82815 -15.67873 -15.57125 -15.50023 -15.15487 -14.94168 -14.83601 -14.59652 -14.12669 -13.92723 -13.78433 -13.72265 -13.70525 -13.49850 -13.35334 -13.24490 -12.63717 -12.58249 -12.43362 -12.16112 -11.93913 -11.86398 -11.70910 -11.57011 -10.99114 -10.97982 -10.91775 -10.26377 -10.25803 -9.67441 -9.36564 -9.05468 -4.91016 0.24229 0.35673 1.04401 1.37175 1.37575 1.42065 1.64355 1.99985 2.06948 2.16171 2.17129 2.51090 2.58516 3.14169 3.24798 3.42265 3.44795 3.53067 3.61657 3.69526 3.78062 3.83530 3.88770 3.96464 4.00965 4.08682 4.08823 4.15645 4.30088 4.33693 4.37335 4.38687 4.45223 4.46623 4.50212 4.53365 4.65038 4.67152 4.72433 4.79699 4.97363 5.04517 5.13403 5.24915 5.29330 5.34475 5.47413 5.78376 6.09448 6.25279 6.33763 6.35432 6.65487 7.02341 7.13771 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.191 3.809 6 O -0.273 6.273 7 C 0.036 3.964 8 C 0.519 3.481 9 O -0.507 6.507 10 N -0.719 5.719 11 C 0.129 3.871 12 H 0.126 0.874 13 C -0.151 4.151 14 C -0.022 4.022 15 H 0.126 0.874 16 C 0.219 3.781 17 N -0.485 5.485 18 C -0.026 4.026 19 C -0.056 4.056 20 N -0.566 5.566 21 C -0.132 4.132 22 C -0.136 4.136 23 C -0.060 4.060 24 O -0.531 6.531 25 Si 0.682 3.318 26 C -0.037 4.037 27 C -0.238 4.238 28 H 0.060 0.940 29 H 0.059 0.941 30 H 0.103 0.897 31 H 0.138 0.862 32 H 0.096 0.904 33 H 0.096 0.904 34 H 0.403 0.597 35 H 0.081 0.919 36 H 0.087 0.913 37 H 0.171 0.829 38 H 0.178 0.822 39 H 0.417 0.583 40 H 0.089 0.911 41 H 0.088 0.912 42 H 0.076 0.924 43 H 0.377 0.623 44 H -0.261 1.261 45 H -0.256 1.256 46 H 0.138 0.862 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.670 -4.399 4.326 7.738 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.145 3.855 6 O -0.185 6.185 7 C -0.043 4.043 8 C 0.303 3.697 9 O -0.381 6.381 10 N -0.372 5.372 11 C 0.024 3.976 12 H 0.143 0.857 13 C -0.190 4.190 14 C -0.043 4.043 15 H 0.144 0.856 16 C -0.045 4.045 17 N -0.205 5.205 18 C -0.174 4.174 19 C -0.190 4.190 20 N -0.170 5.170 21 C -0.172 4.172 22 C -0.137 4.137 23 C -0.170 4.170 24 O -0.338 6.338 25 Si 0.584 3.416 26 C -0.055 4.055 27 C -0.257 4.257 28 H 0.079 0.921 29 H 0.077 0.923 30 H 0.121 0.879 31 H 0.156 0.844 32 H 0.114 0.886 33 H 0.114 0.886 34 H 0.237 0.763 35 H 0.099 0.901 36 H 0.106 0.894 37 H 0.189 0.811 38 H 0.195 0.805 39 H 0.255 0.745 40 H 0.108 0.892 41 H 0.107 0.893 42 H 0.094 0.906 43 H 0.225 0.775 44 H -0.186 1.186 45 H -0.181 1.181 46 H 0.156 0.844 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -4.260 -3.145 3.340 6.260 hybrid contribution -0.432 -0.792 0.158 0.916 sum -4.692 -3.937 3.498 7.053 Atomic orbital electron populations 1.23147 0.77611 1.04390 1.01815 1.86069 1.22018 1.26661 1.88038 1.18676 0.91443 0.84379 0.92728 1.20347 0.92933 0.97198 1.16183 1.18375 0.81872 0.92471 0.92819 1.86234 1.14838 1.29541 1.87869 1.22522 0.90216 0.87257 1.04280 1.20057 0.87376 0.85687 0.76544 1.90788 1.79741 1.20839 1.46689 1.45778 1.06033 1.09122 1.76265 1.22495 0.78072 1.00765 0.96244 0.85664 1.23586 0.95746 1.01997 0.97679 1.20760 0.95726 0.91602 0.96164 0.85585 1.22852 0.92336 0.97120 0.92169 1.70253 1.14412 1.09338 1.26452 1.22432 1.00269 0.97757 0.96963 1.22821 0.94303 0.95564 1.06285 1.43263 1.21188 1.21788 1.30739 1.23435 0.95488 0.98724 0.99513 1.18468 0.92260 0.92080 1.10881 1.24560 1.03984 1.00250 0.88200 1.86607 1.75825 1.41650 1.29725 0.95305 0.79679 0.77318 0.89315 1.20733 0.92569 0.97900 0.94282 1.21108 1.00472 0.91675 1.12470 0.92145 0.92278 0.87907 0.84417 0.88580 0.88601 0.76262 0.90077 0.89437 0.81132 0.80461 0.74509 0.89204 0.89333 0.90600 0.77544 1.18621 1.18072 0.84430 0.84680 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.32 10.50 -19.42 -0.20 -0.52 16 3 C 0.17 0.27 6.68 -39.24 -0.26 0.01 16 4 C -0.25 -0.35 8.97 -39.29 -0.35 -0.71 16 5 C 0.19 0.53 6.66 -39.24 -0.26 0.27 16 6 O -0.27 -0.88 8.99 -39.34 -0.35 -1.23 16 7 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 8 C 0.52 0.42 7.91 -10.98 -0.09 0.33 16 9 O -0.51 -2.84 16.10 -14.35 -0.23 -3.07 16 10 N -0.72 1.86 5.35 -53.02 -0.28 1.57 16 11 C 0.13 -0.27 4.24 -67.12 -0.28 -0.55 16 12 H 0.13 -0.05 7.47 -51.93 -0.39 -0.44 16 13 C -0.15 0.42 7.35 -25.92 -0.19 0.23 16 14 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 15 H 0.13 -0.17 8.14 -51.93 -0.42 -0.59 16 16 C 0.22 0.19 7.36 -155.42 -1.14 -0.95 16 17 N -0.49 -1.86 11.25 -10.81 -0.12 -1.99 16 18 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 19 C -0.06 0.03 12.04 -16.56 -0.20 -0.17 16 20 N -0.57 0.71 5.94 -10.23 -0.06 0.65 16 21 C -0.13 0.35 7.38 -25.92 -0.19 0.15 16 22 C -0.14 -0.37 5.30 -104.45 -0.55 -0.93 16 23 C -0.06 -0.14 2.37 36.01 0.09 -0.05 16 24 O -0.53 -2.04 12.86 -35.23 -0.45 -2.49 16 25 Si 0.68 0.14 30.21 -169.99 -5.13 -5.00 16 26 C -0.04 -0.05 8.65 -39.63 -0.34 -0.39 16 27 C -0.24 -0.17 9.04 -39.41 -0.36 -0.52 16 28 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 31 H 0.14 -0.11 6.30 -52.49 -0.33 -0.44 16 32 H 0.10 -0.26 7.66 -51.93 -0.40 -0.66 16 33 H 0.10 -0.34 7.66 -51.93 -0.40 -0.74 16 34 H 0.40 -2.24 8.73 -40.82 -0.36 -2.60 16 35 H 0.08 -0.34 6.64 -51.93 -0.34 -0.69 16 36 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 37 H 0.17 0.01 8.06 -52.48 -0.42 -0.42 16 38 H 0.18 -0.63 8.06 -52.49 -0.42 -1.05 16 39 H 0.42 -1.73 7.53 -40.82 -0.31 -2.04 16 40 H 0.09 -0.20 8.14 -51.92 -0.42 -0.63 16 41 H 0.09 -0.28 8.07 -51.93 -0.42 -0.70 16 42 H 0.08 0.16 7.82 -51.93 -0.41 -0.25 16 43 H 0.38 0.04 8.74 45.56 0.40 0.44 16 44 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 45 H -0.26 -0.62 6.74 56.52 0.38 -0.24 16 46 H 0.14 -0.04 4.89 -52.48 -0.26 -0.30 16 47 H 0.14 -0.21 6.29 -52.49 -0.33 -0.54 16 LS Contribution 391.98 15.07 5.91 5.91 Total: 0.00 -13.07 391.98 -10.59 -23.66 By element: Atomic # 1 Polarization: -8.59 SS G_CDS: -6.09 Total: -14.67 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -3.56 Total: -2.81 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -0.47 Total: 0.24 kcal Atomic # 8 Polarization: -6.08 SS G_CDS: -1.24 Total: -7.33 kcal Atomic # 14 Polarization: 0.14 SS G_CDS: -5.13 Total: -5.00 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -13.07 -10.59 -23.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.535 kcal (2) G-P(sol) polarization free energy of solvation -13.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.539 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.585 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.659 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds