Wall clock time and date at job start Tue Mar 9 2021 13:03:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35897 * 116.99549 * 2 1 4 4 C 1.38619 * 120.02655 * 180.02562 * 3 2 1 5 5 C 1.38651 * 119.89038 * 179.97438 * 4 3 2 6 6 O 1.35901 * 120.02697 * 179.97438 * 5 4 3 7 7 C 1.42895 * 116.99731 * 0.02562 * 6 5 4 8 8 C 1.50699 * 109.47193 * 179.97438 * 7 6 5 9 9 O 1.21279 * 119.99940 * 0.02562 * 8 7 6 10 10 N 1.34782 * 120.00545 * 179.97438 * 8 7 6 11 11 C 1.46493 * 120.00293 * 180.02562 * 10 8 7 12 12 H 1.09005 * 112.90733 * 336.25350 * 11 10 8 13 13 C 1.53784 * 113.61452 * 107.50236 * 11 10 8 14 14 C 1.53781 * 87.07940 * 139.98327 * 13 11 10 15 15 H 1.09000 * 113.69569 * 89.12968 * 14 13 11 16 16 C 1.50706 * 113.61233 * 220.02279 * 14 13 11 17 17 N 1.30498 * 125.64721 * 192.52364 * 16 14 13 18 18 C 1.34125 * 109.25251 * 179.97438 * 17 16 14 19 19 C 1.34667 * 108.02552 * 359.97438 * 18 17 16 20 20 N 1.35040 * 125.65220 * 12.21309 * 16 14 13 21 21 C 1.53776 * 113.61503 * 204.99996 * 11 10 8 22 22 C 1.38747 * 119.94577 * 0.27501 * 5 4 3 23 23 C 1.50699 * 119.97348 * 179.69812 * 22 5 4 24 24 O 1.42904 * 109.47135 * 75.00299 * 23 22 5 25 25 Si 1.86303 * 109.47387 * 194.99895 * 23 22 5 26 26 C 1.38197 * 120.05560 * 359.44868 * 22 5 4 27 27 C 1.38157 * 120.10782 * 0.55294 * 26 22 5 28 28 H 1.08993 * 109.47364 * 300.00014 * 1 2 3 29 29 H 1.09002 * 109.47169 * 60.00785 * 1 2 3 30 30 H 1.09005 * 109.46900 * 179.97438 * 1 2 3 31 31 H 1.07996 * 120.05135 * 359.97438 * 4 3 2 32 32 H 1.09004 * 109.47346 * 59.99927 * 7 6 5 33 33 H 1.09001 * 109.47221 * 299.99585 * 7 6 5 34 34 H 0.96997 * 119.99402 * 0.02562 * 10 8 7 35 35 H 1.08996 * 113.60998 * 25.43447 * 13 11 10 36 36 H 1.08997 * 113.61611 * 254.52773 * 13 11 10 37 37 H 1.08010 * 125.98920 * 180.02562 * 18 17 16 38 38 H 1.07997 * 126.59535 * 180.02562 * 19 18 17 39 39 H 0.97005 * 126.39204 * 359.97438 * 20 16 14 40 40 H 1.09011 * 113.61528 * 105.46764 * 21 11 10 41 41 H 1.09003 * 113.69414 * 334.57926 * 21 11 10 42 42 H 1.08995 * 109.47550 * 315.00363 * 23 22 5 43 43 H 0.96699 * 114.00592 * 180.02562 * 24 23 22 44 44 H 1.48497 * 109.99854 * 178.68211 * 25 23 22 45 45 H 1.48497 * 110.00332 * 300.00304 * 25 23 22 46 46 H 1.08007 * 119.94826 * 180.27409 * 26 22 5 47 47 H 1.08001 * 119.97488 * 179.70812 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0005 5 6 4.0566 2.5211 -0.0011 6 8 5.4135 2.5962 -0.0011 7 6 6.1315 1.3608 -0.0011 8 6 7.6123 1.6404 -0.0017 9 8 8.0133 2.7850 -0.0017 10 7 8.4912 0.6186 -0.0013 11 6 9.9307 0.8904 -0.0014 12 1 10.1771 1.8721 -0.4060 13 6 10.6146 0.5889 1.3426 14 6 11.7873 0.0177 0.5280 15 1 12.5421 0.7597 0.2675 16 6 12.3787 -1.2362 1.1190 17 7 13.5083 -1.7848 0.7639 18 6 13.7168 -2.8851 1.5020 19 6 12.6772 -3.0233 2.3469 20 7 11.8305 -1.9749 2.1076 21 6 10.7730 -0.2503 -0.5964 22 6 3.2969 3.6822 0.0047 23 6 3.9772 5.0269 0.0110 24 8 4.5030 5.3009 -1.2893 25 14 2.7437 6.3447 0.4722 26 6 1.9171 3.6065 -0.0005 27 6 1.2905 2.3752 0.0000 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5137 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 4.0196 0.3793 -0.0005 32 1 5.8699 0.7884 -0.8911 33 1 5.8699 0.7885 0.8889 34 1 8.1705 -0.2969 -0.0010 35 1 10.0928 -0.1588 1.9399 36 1 10.8724 1.4821 1.9115 37 1 14.5694 -3.5444 1.4318 38 1 12.5400 -3.8082 3.0759 39 1 10.9925 -1.7963 2.5624 40 1 11.1586 -0.0344 -1.5929 41 1 10.2957 -1.2279 -0.5299 42 1 4.7898 5.0197 0.7373 43 1 4.9561 6.1523 -1.3590 44 1 3.4094 7.6715 0.5130 45 1 1.6306 6.3650 -0.5105 46 1 1.3275 4.5115 -0.0005 47 1 0.2119 2.3186 0.0007 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:41 Heat of formation + Delta-G solvation = -15.729614 kcal Electronic energy + Delta-G solvation = -31196.849259 eV Core-core repulsion = 26735.542495 eV Total energy + Delta-G solvation = -4461.306764 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.10680 -41.83708 -41.11337 -40.07000 -39.21440 -38.20252 -37.09060 -34.82815 -33.46427 -32.40563 -31.53361 -30.71708 -29.40800 -28.36395 -26.83819 -26.07864 -25.98526 -23.76378 -22.64280 -22.39030 -21.94246 -21.55580 -20.76078 -19.90414 -19.03803 -18.55992 -18.41920 -17.86347 -17.47343 -17.29458 -16.98565 -16.86727 -16.65152 -16.46471 -15.79271 -15.68840 -15.63707 -15.54862 -15.21437 -14.91144 -14.85228 -14.60048 -14.06610 -14.02479 -13.78967 -13.67357 -13.55791 -13.49849 -13.33171 -13.20749 -12.53537 -12.50361 -12.42234 -12.04633 -11.98799 -11.76337 -11.74191 -11.61066 -11.04778 -11.03269 -11.00044 -10.40669 -10.20415 -9.70893 -9.35442 -9.11052 -4.94580 0.18571 0.29756 1.08302 1.30481 1.38952 1.42597 1.58659 1.91275 2.11865 2.18244 2.24733 2.52442 2.57422 3.25855 3.35743 3.47327 3.54261 3.56968 3.71230 3.75432 3.87841 3.94697 3.97115 4.04475 4.05547 4.18620 4.24938 4.30339 4.36896 4.42266 4.45141 4.49536 4.55233 4.57667 4.61144 4.63950 4.76884 4.78851 4.84179 4.95803 4.99953 5.04986 5.16401 5.22080 5.29241 5.41641 5.46207 5.78484 6.11170 6.34197 6.41811 6.48804 6.60160 7.08185 7.13649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.177 3.823 6 O -0.302 6.302 7 C 0.032 3.968 8 C 0.517 3.483 9 O -0.565 6.565 10 N -0.698 5.698 11 C 0.127 3.873 12 H 0.104 0.896 13 C -0.138 4.138 14 C -0.025 4.025 15 H 0.117 0.883 16 C 0.212 3.788 17 N -0.534 5.534 18 C -0.065 4.065 19 C -0.041 4.041 20 N -0.555 5.555 21 C -0.120 4.120 22 C -0.161 4.161 23 C -0.079 4.079 24 O -0.557 6.557 25 Si 0.777 3.223 26 C -0.042 4.042 27 C -0.238 4.238 28 H 0.071 0.929 29 H 0.065 0.935 30 H 0.118 0.882 31 H 0.157 0.843 32 H 0.117 0.883 33 H 0.127 0.873 34 H 0.421 0.579 35 H 0.102 0.898 36 H 0.080 0.920 37 H 0.176 0.824 38 H 0.211 0.789 39 H 0.432 0.568 40 H 0.085 0.915 41 H 0.101 0.899 42 H 0.069 0.931 43 H 0.388 0.612 44 H -0.291 1.291 45 H -0.282 1.282 46 H 0.150 0.850 47 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.542 -6.080 5.356 10.415 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.118 3.882 4 C -0.270 4.270 5 C 0.131 3.869 6 O -0.214 6.214 7 C -0.046 4.046 8 C 0.304 3.696 9 O -0.443 6.443 10 N -0.352 5.352 11 C 0.022 3.978 12 H 0.122 0.878 13 C -0.177 4.177 14 C -0.045 4.045 15 H 0.135 0.865 16 C -0.052 4.052 17 N -0.254 5.254 18 C -0.212 4.212 19 C -0.175 4.175 20 N -0.160 5.160 21 C -0.159 4.159 22 C -0.162 4.162 23 C -0.187 4.187 24 O -0.366 6.366 25 Si 0.681 3.319 26 C -0.060 4.060 27 C -0.257 4.257 28 H 0.090 0.910 29 H 0.083 0.917 30 H 0.136 0.864 31 H 0.175 0.825 32 H 0.135 0.865 33 H 0.145 0.855 34 H 0.259 0.741 35 H 0.120 0.880 36 H 0.099 0.901 37 H 0.194 0.806 38 H 0.227 0.773 39 H 0.273 0.727 40 H 0.104 0.896 41 H 0.120 0.880 42 H 0.087 0.913 43 H 0.237 0.763 44 H -0.218 1.218 45 H -0.209 1.209 46 H 0.168 0.832 47 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -6.133 -4.899 4.385 8.991 hybrid contribution 0.185 -0.356 -0.178 0.439 sum -5.947 -5.255 4.207 8.982 Atomic orbital electron populations 1.23406 0.76033 1.05737 1.02660 1.86051 1.23724 1.26409 1.87935 1.18854 0.91714 0.84899 0.92705 1.20551 0.93349 0.97400 1.15673 1.18540 0.81843 0.93079 0.93476 1.86191 1.15301 1.31761 1.88143 1.22779 0.88606 0.86511 1.06688 1.20434 0.88380 0.85287 0.75540 1.90766 1.80664 1.23154 1.49702 1.45621 1.05468 1.09491 1.74616 1.22386 0.78366 1.00086 0.96997 0.87800 1.23538 0.94869 1.02134 0.97203 1.20770 0.95937 0.90821 0.96997 0.86474 1.23084 0.92000 0.97557 0.92563 1.70178 1.16250 1.10744 1.28238 1.22750 1.01875 0.98198 0.98331 1.23282 0.93127 0.95655 1.05470 1.43232 1.21578 1.21140 1.30041 1.23368 0.94740 0.98926 0.98896 1.18748 0.93107 0.92384 1.11919 1.24956 1.04700 1.01654 0.87375 1.86558 1.76368 1.42835 1.30866 0.94200 0.76628 0.73737 0.87352 1.20903 0.92136 0.98787 0.94177 1.21379 1.01645 0.91176 1.11499 0.91018 0.91686 0.86426 0.82522 0.86515 0.85514 0.74100 0.87971 0.90100 0.80649 0.77277 0.72697 0.89645 0.88015 0.91337 0.76291 1.21825 1.20858 0.83229 0.82491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.29 10.50 -92.39 -0.97 -1.26 16 3 C 0.16 0.39 6.68 22.49 0.15 0.54 16 4 C -0.25 -0.61 8.97 22.46 0.20 -0.41 16 5 C 0.18 1.10 6.66 22.49 0.15 1.25 16 6 O -0.30 -2.28 8.99 -73.40 -0.66 -2.94 16 7 C 0.03 -0.06 5.22 71.24 0.37 0.31 16 8 C 0.52 1.12 7.91 87.66 0.69 1.82 16 9 O -0.57 -7.55 16.10 16.01 0.26 -7.29 16 10 N -0.70 3.92 5.35 -440.04 -2.36 1.56 16 11 C 0.13 -0.47 4.24 45.52 0.19 -0.28 16 12 H 0.10 0.13 7.47 -2.38 -0.02 0.11 16 13 C -0.14 0.80 7.35 31.12 0.23 1.03 16 14 C -0.02 0.06 4.29 -11.01 -0.05 0.01 16 15 H 0.12 -0.11 8.14 -2.39 -0.02 -0.13 16 16 C 0.21 0.41 7.36 138.13 1.02 1.42 16 17 N -0.53 -4.68 11.25 -188.12 -2.12 -6.79 16 18 C -0.06 -0.28 11.87 83.52 0.99 0.71 16 19 C -0.04 0.09 12.04 83.09 1.00 1.09 16 20 N -0.55 2.03 5.94 -186.27 -1.11 0.92 16 21 C -0.12 0.62 7.38 31.12 0.23 0.85 16 22 C -0.16 -1.02 5.30 -19.75 -0.10 -1.13 16 23 C -0.08 -0.47 2.37 71.24 0.17 -0.31 16 24 O -0.56 -5.36 12.86 -148.98 -1.92 -7.28 16 25 Si 0.78 0.64 30.21 68.60 2.07 2.71 16 26 C -0.04 -0.11 8.65 22.24 0.19 0.08 16 27 C -0.24 -0.16 9.04 22.38 0.20 0.05 16 28 H 0.07 -0.60 7.66 -2.39 -0.02 -0.61 16 29 H 0.06 -0.47 7.66 -2.39 -0.02 -0.49 16 30 H 0.12 -1.10 8.14 -2.38 -0.02 -1.11 16 31 H 0.16 -0.45 6.30 -2.91 -0.02 -0.47 16 32 H 0.12 -0.74 7.66 -2.38 -0.02 -0.76 16 33 H 0.13 -1.08 7.66 -2.39 -0.02 -1.10 16 34 H 0.42 -5.42 8.73 -92.71 -0.81 -6.23 16 35 H 0.10 -1.04 6.64 -2.39 -0.02 -1.05 16 36 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 37 H 0.18 0.23 8.06 -2.91 -0.02 0.20 16 38 H 0.21 -1.99 8.06 -2.91 -0.02 -2.01 16 39 H 0.43 -4.48 7.53 -92.70 -0.70 -5.17 16 40 H 0.08 -0.33 8.14 -2.38 -0.02 -0.35 16 41 H 0.10 -0.77 8.07 -2.39 -0.02 -0.79 16 42 H 0.07 0.44 7.82 -2.39 -0.02 0.42 16 43 H 0.39 0.91 8.74 -74.06 -0.65 0.26 16 44 H -0.29 -1.60 7.11 99.48 0.71 -0.89 16 45 H -0.28 -1.39 6.74 99.48 0.67 -0.72 16 46 H 0.15 -0.13 4.89 -2.91 -0.01 -0.15 16 47 H 0.16 -0.74 6.29 -2.91 -0.02 -0.76 16 Total: 0.00 -33.30 391.98 -1.14 -34.44 By element: Atomic # 1 Polarization: -21.03 SS G_CDS: -1.10 Total: -22.13 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: 6.75 Total: 8.05 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -5.58 Total: -4.31 kcal Atomic # 8 Polarization: -15.48 SS G_CDS: -3.29 Total: -18.77 kcal Atomic # 14 Polarization: 0.64 SS G_CDS: 2.07 Total: 2.71 kcal Total: -33.30 -1.14 -34.44 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.708 kcal (2) G-P(sol) polarization free energy of solvation -33.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.438 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.730 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds