Wall clock time and date at job start Tue Mar 9 2021 13:03:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37644 * 125.67179 * 2 1 4 4 C 1.46666 * 126.22590 * 359.96869 * 3 2 1 5 5 O 1.21702 * 120.00347 * 4.65846 * 4 3 2 6 6 N 1.34782 * 119.99791 * 184.65323 * 4 3 2 7 7 C 1.46500 * 119.99703 * 174.90200 * 6 4 3 8 8 H 1.09003 * 112.85163 * 336.19346 * 7 6 4 9 9 C 1.53949 * 113.66789 * 107.44234 * 7 6 4 10 10 C 1.53784 * 87.02207 * 139.92952 * 9 7 6 11 11 H 1.09001 * 113.60984 * 89.22823 * 10 9 7 12 12 C 1.50694 * 113.61503 * 220.04801 * 10 9 7 13 13 N 1.30501 * 125.65119 * 194.41070 * 12 10 9 14 14 C 1.34123 * 109.26125 * 180.14735 * 13 12 10 15 15 C 1.34678 * 108.01698 * 359.61978 * 14 13 12 16 16 N 1.35042 * 125.65442 * 14.13473 * 12 10 9 17 17 C 1.53782 * 87.17173 * 334.63807 * 10 9 7 18 18 C 1.37884 * 107.54727 * 179.71775 * 3 2 1 19 19 C 1.39876 * 107.09018 * 0.25552 * 18 3 2 20 20 Br 1.89112 * 126.07373 * 180.02562 * 19 18 3 21 21 C 1.35504 * 107.85863 * 0.02562 * 19 18 3 22 22 C 1.50697 * 125.57446 * 179.97438 * 21 19 18 23 23 O 1.42900 * 109.47204 * 150.03157 * 22 21 19 24 24 Si 1.86298 * 109.47236 * 30.02937 * 22 21 19 25 25 H 1.09002 * 109.46837 * 95.78212 * 1 2 3 26 26 H 1.08998 * 109.47006 * 215.78114 * 1 2 3 27 27 H 1.08998 * 109.47381 * 335.78606 * 1 2 3 28 28 H 0.96993 * 120.00021 * 354.90458 * 6 4 3 29 29 H 1.08999 * 113.61472 * 25.41374 * 9 7 6 30 30 H 1.09002 * 113.66898 * 254.45441 * 9 7 6 31 31 H 1.07996 * 125.99536 * 179.88113 * 14 13 12 32 32 H 1.08003 * 126.58898 * 180.20982 * 15 14 13 33 33 H 0.97005 * 126.39326 * 0.02562 * 16 12 10 34 34 H 1.09004 * 113.61341 * 139.93587 * 17 10 9 35 35 H 1.08998 * 113.61700 * 270.75878 * 17 10 9 36 36 H 1.07996 * 126.45573 * 180.26599 * 18 3 2 37 37 H 1.09003 * 109.47207 * 270.03142 * 22 21 19 38 38 H 0.96701 * 113.99752 * 299.99903 * 23 22 21 39 39 H 1.48499 * 109.99708 * 58.67765 * 24 22 21 40 40 H 1.48501 * 110.00270 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8120 2.5122 -0.0006 5 8 0.6244 2.7643 0.0843 6 7 2.7085 3.5142 -0.0953 7 6 2.2483 4.9005 -0.2085 8 1 1.2387 4.9798 -0.6117 9 6 2.4694 5.7313 1.0686 10 6 2.8732 6.8936 0.1462 11 1 2.0350 7.5198 -0.1596 12 6 4.0439 7.6922 0.6587 13 7 4.4148 8.8645 0.2214 14 6 5.4949 9.2705 0.9051 15 6 5.8001 8.3170 1.8060 16 7 4.8800 7.3157 1.6501 17 6 3.2611 5.8314 -0.8960 18 6 3.5781 0.6893 0.0065 19 6 3.5529 -0.7093 0.0044 20 35 5.0610 -1.8502 0.0117 21 6 2.2559 -1.1015 -0.0037 22 6 1.7715 -2.5285 -0.0090 23 8 0.5093 -2.6056 0.6567 24 14 3.0068 -3.6069 0.8751 25 1 -0.3633 -0.1035 -1.0225 26 1 -0.3633 -0.8337 0.6009 27 1 -0.3634 0.9372 0.4215 28 1 3.6582 3.3175 -0.0884 29 1 3.2851 5.3650 1.6920 30 1 1.5555 5.9186 1.6324 31 1 6.0242 10.2008 0.7617 32 1 6.6146 8.3383 2.5150 33 1 4.8368 6.4897 2.1568 34 1 2.9854 6.0994 -1.9160 35 1 4.2939 5.4936 -0.8116 36 1 4.4582 1.3152 0.0122 37 1 1.6611 -2.8709 -1.0379 38 1 0.5327 -2.3156 1.5789 39 1 3.1901 -3.1308 2.2698 40 1 2.5404 -5.0168 0.8774 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:44 Heat of formation + Delta-G solvation = 72.653878 kcal Electronic energy + Delta-G solvation = -26192.222049 eV Core-core repulsion = 22250.632110 eV Total energy + Delta-G solvation = -3941.589939 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.047 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.09788 -42.91029 -40.88352 -39.17732 -38.04728 -35.16961 -34.41401 -33.44183 -32.38130 -31.27049 -30.47343 -27.58629 -27.28953 -26.81064 -25.67591 -23.43491 -22.60642 -21.84602 -21.43438 -21.07503 -20.43451 -19.01098 -18.94412 -18.27987 -17.36595 -17.18216 -16.53534 -16.38745 -16.16281 -15.80122 -15.68448 -15.46879 -15.29733 -14.89451 -14.70899 -14.62485 -14.56061 -14.10090 -14.04568 -13.73763 -13.54531 -13.47820 -13.19072 -12.82144 -12.49625 -12.44756 -12.05672 -12.01694 -11.73279 -11.67013 -11.19205 -11.02181 -11.00131 -10.84307 -10.23929 -9.89029 -9.36084 -9.32925 -4.70122 0.12740 0.34580 0.89077 1.10415 1.18588 1.43762 1.55814 1.91603 2.09766 2.15028 2.17638 2.30539 3.02087 3.27004 3.28915 3.38313 3.56154 3.59906 3.74968 3.78978 3.98401 4.10500 4.26111 4.26822 4.33213 4.39476 4.49714 4.57049 4.59483 4.63765 4.65393 4.68204 4.79774 4.87249 4.98909 5.07296 5.18594 5.21826 5.45139 5.57255 5.76382 5.80390 6.19473 6.38040 6.50696 7.02234 7.15610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 N -0.390 5.390 3 C -0.058 4.058 4 C 0.592 3.408 5 O -0.574 6.574 6 N -0.690 5.690 7 C 0.131 3.869 8 H 0.110 0.890 9 C -0.139 4.139 10 C -0.024 4.024 11 H 0.119 0.881 12 C 0.213 3.787 13 N -0.534 5.534 14 C -0.064 4.064 15 C -0.042 4.042 16 N -0.555 5.555 17 C -0.120 4.120 18 C -0.090 4.090 19 C -0.191 4.191 20 Br 0.090 6.910 21 C 0.056 3.944 22 C -0.041 4.041 23 O -0.541 6.541 24 Si 0.630 3.370 25 H 0.079 0.921 26 H 0.114 0.886 27 H 0.098 0.902 28 H 0.418 0.582 29 H 0.099 0.901 30 H 0.081 0.919 31 H 0.176 0.824 32 H 0.210 0.790 33 H 0.431 0.569 34 H 0.088 0.912 35 H 0.101 0.899 36 H 0.189 0.811 37 H 0.140 0.860 38 H 0.387 0.613 39 H -0.278 1.278 40 H -0.270 1.270 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.486 -0.917 1.238 5.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 N -0.062 5.062 3 C -0.172 4.172 4 C 0.381 3.619 5 O -0.455 6.455 6 N -0.341 5.341 7 C 0.026 3.974 8 H 0.128 0.872 9 C -0.179 4.179 10 C -0.045 4.045 11 H 0.137 0.863 12 C -0.051 4.051 13 N -0.254 5.254 14 C -0.211 4.211 15 C -0.176 4.176 16 N -0.160 5.160 17 C -0.159 4.159 18 C -0.117 4.117 19 C -0.276 4.276 20 Br 0.173 6.827 21 C -0.067 4.067 22 C -0.151 4.151 23 O -0.348 6.348 24 Si 0.531 3.469 25 H 0.098 0.902 26 H 0.132 0.868 27 H 0.116 0.884 28 H 0.256 0.744 29 H 0.117 0.883 30 H 0.099 0.901 31 H 0.193 0.807 32 H 0.226 0.774 33 H 0.273 0.727 34 H 0.107 0.893 35 H 0.119 0.881 36 H 0.206 0.794 37 H 0.157 0.843 38 H 0.237 0.763 39 H -0.204 1.204 40 H -0.196 1.196 Dipole moment (debyes) X Y Z Total from point charges 4.378 -1.358 0.747 4.644 hybrid contribution -0.610 -0.008 1.585 1.698 sum 3.767 -1.365 2.333 4.637 Atomic orbital electron populations 1.22723 0.74401 1.06598 1.05054 1.43942 1.07709 1.03881 1.50649 1.20203 0.90380 0.87819 1.18768 1.17005 0.85498 0.83770 0.75652 1.90803 1.17686 1.85027 1.52034 1.45470 1.10063 1.05224 1.73365 1.22467 0.99786 0.78239 0.96913 0.87211 1.23574 1.03118 0.94013 0.97163 1.20780 0.92891 0.93185 0.97628 0.86322 1.23109 0.96742 0.93370 0.91921 1.70177 1.14904 1.11311 1.29005 1.22738 0.97705 1.02356 0.98322 1.23274 0.98800 0.90281 1.05255 1.43232 1.23737 1.19381 1.29670 1.23380 1.00052 0.93108 0.99405 1.21507 0.95603 0.92497 1.02087 1.20696 0.90560 0.95048 1.21287 1.96323 1.32637 1.56358 1.97357 1.20985 0.89716 0.90224 1.05766 1.24716 0.93009 0.92754 1.04611 1.86551 1.29684 1.88604 1.29986 0.92715 0.92508 0.77883 0.83768 0.90212 0.86811 0.88370 0.74353 0.88280 0.90053 0.80700 0.77376 0.72737 0.89330 0.88071 0.79396 0.84295 0.76335 1.20367 1.19622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.03 10.30 127.77 1.32 1.35 16 2 N -0.39 -0.61 3.16 -519.62 -1.64 -2.25 16 3 C -0.06 -0.01 6.88 40.35 0.28 0.27 16 4 C 0.59 0.66 7.77 86.44 0.67 1.33 16 5 O -0.57 -4.70 14.18 -4.35 -0.06 -4.77 16 6 N -0.69 4.13 5.34 -443.71 -2.37 1.76 16 7 C 0.13 -0.72 4.21 45.58 0.19 -0.53 16 8 H 0.11 -0.19 7.53 -2.39 -0.02 -0.21 16 9 C -0.14 0.95 7.38 31.18 0.23 1.18 16 10 C -0.02 0.09 4.28 -11.01 -0.05 0.04 16 11 H 0.12 -0.29 8.14 -2.39 -0.02 -0.31 16 12 C 0.21 0.23 7.36 138.13 1.02 1.25 16 13 N -0.53 -4.29 11.25 -188.14 -2.12 -6.41 16 14 C -0.06 -0.25 11.87 83.53 0.99 0.74 16 15 C -0.04 0.10 12.04 83.09 1.00 1.10 16 16 N -0.56 2.30 5.94 -186.27 -1.11 1.20 16 17 C -0.12 0.81 7.38 31.12 0.23 1.04 16 18 C -0.09 0.36 10.34 22.58 0.23 0.59 16 19 C -0.19 0.30 6.16 22.03 0.14 0.43 16 20 Br 0.09 -0.35 28.25 -20.37 -0.58 -0.92 16 21 C 0.06 0.02 6.15 41.34 0.25 0.28 16 22 C -0.04 0.01 2.99 71.23 0.21 0.22 16 23 O -0.54 -0.29 10.12 -148.98 -1.51 -1.79 16 24 Si 0.63 1.01 27.11 68.60 1.86 2.87 16 25 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 26 H 0.11 -0.21 5.24 -2.39 -0.01 -0.22 16 27 H 0.10 0.33 5.92 -2.39 -0.01 0.32 16 28 H 0.42 -4.96 7.63 -92.71 -0.71 -5.67 16 29 H 0.10 -1.03 6.64 -2.39 -0.02 -1.05 16 30 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 31 H 0.18 0.16 8.06 -2.91 -0.02 0.13 16 32 H 0.21 -2.02 8.06 -2.91 -0.02 -2.04 16 33 H 0.43 -4.61 7.54 -92.70 -0.70 -5.31 16 34 H 0.09 -0.52 8.14 -2.38 -0.02 -0.54 16 35 H 0.10 -0.89 8.07 -2.39 -0.02 -0.91 16 36 H 0.19 -2.13 7.45 -2.91 -0.02 -2.15 16 37 H 0.14 -0.30 7.96 -2.39 -0.02 -0.32 16 38 H 0.39 -1.55 8.29 -74.06 -0.61 -2.16 16 39 H -0.28 -1.79 7.11 99.48 0.71 -1.08 16 40 H -0.27 -2.15 7.11 99.48 0.71 -1.45 16 Total: 0.00 -22.71 345.62 -1.66 -24.37 By element: Atomic # 1 Polarization: -22.50 SS G_CDS: -0.85 Total: -23.35 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: 6.71 Total: 9.30 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -7.24 Total: -5.70 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -1.57 Total: -6.56 kcal Atomic # 14 Polarization: 1.01 SS G_CDS: 1.86 Total: 2.87 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -0.58 Total: -0.92 kcal Total: -22.71 -1.66 -24.37 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.025 kcal (2) G-P(sol) polarization free energy of solvation -22.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.314 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.371 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds