Wall clock time and date at job start Tue Mar 9 2021 13:03:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86298 * 109.47189 * 2 1 4 4 C 1.50697 * 109.47073 * 120.00336 * 2 1 3 5 5 C 1.38241 * 119.94097 * 65.00005 * 4 2 1 6 6 C 1.38189 * 120.06846 * 180.30129 * 5 4 2 7 7 C 1.38679 * 119.95435 * 359.41864 * 6 5 4 8 8 O 1.35913 * 120.05845 * 180.27444 * 7 6 5 9 9 C 1.42901 * 116.99973 * 0.30407 * 8 7 6 10 10 C 1.50699 * 109.47017 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00212 * 359.97438 * 10 9 8 12 12 N 1.34786 * 119.99868 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00009 * 180.02562 * 12 10 9 14 14 H 1.09009 * 112.84637 * 334.66242 * 13 12 10 15 15 C 1.53773 * 113.61788 * 105.85949 * 13 12 10 16 16 C 1.53955 * 87.01928 * 139.95159 * 15 13 12 17 17 H 1.09002 * 113.61314 * 89.20489 * 16 15 13 18 18 C 1.50703 * 113.66577 * 220.06736 * 16 15 13 19 19 N 1.30498 * 125.64845 * 192.25476 * 18 16 15 20 20 C 1.34134 * 109.25503 * 179.89661 * 19 18 16 21 21 C 1.34663 * 108.01645 * 0.36597 * 20 19 18 22 22 N 1.35037 * 125.65026 * 12.56111 * 18 16 15 23 23 C 1.53775 * 87.11169 * 334.63687 * 16 15 13 24 24 C 1.38825 * 119.87932 * 0.57766 * 7 6 5 25 25 Br 1.89104 * 120.03409 * 179.74476 * 24 7 6 26 26 C 1.38194 * 119.93575 * 359.72317 * 24 7 6 27 27 H 0.96695 * 113.99482 * 299.99896 * 1 2 3 28 28 H 1.09001 * 109.46524 * 240.00278 * 2 1 3 29 29 H 1.48501 * 110.00362 * 299.99928 * 3 2 1 30 30 H 1.48499 * 110.00041 * 61.32168 * 3 2 1 31 31 H 1.08002 * 119.96191 * 0.02562 * 5 4 2 32 32 H 1.07997 * 120.01726 * 179.70388 * 6 5 4 33 33 H 1.08997 * 109.47239 * 299.99666 * 9 8 7 34 34 H 1.08996 * 109.47113 * 59.99748 * 9 8 7 35 35 H 0.96997 * 120.00108 * 0.02562 * 12 10 9 36 36 H 1.09002 * 113.61910 * 254.53144 * 15 13 12 37 37 H 1.09001 * 113.61465 * 25.43142 * 15 13 12 38 38 H 1.07998 * 125.98547 * 180.18498 * 20 19 18 39 39 H 1.08009 * 126.58718 * 179.81447 * 21 20 19 40 40 H 0.97008 * 126.40096 * 359.97438 * 22 18 16 41 41 H 1.08993 * 113.62036 * 270.81143 * 23 16 15 42 42 H 1.09007 * 113.61132 * 139.90675 * 23 16 15 43 43 H 1.07995 * 119.98088 * 180.02562 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6841 -2.0603 1.3970 6 6 2.1381 -2.7131 2.5272 7 6 2.8529 -2.0158 3.4894 8 8 3.3053 -2.6569 4.5992 9 6 3.0139 -4.0518 4.7066 10 6 3.5903 -4.5879 5.9917 11 8 4.1919 -3.8484 6.7414 12 7 3.4382 -5.8894 6.3072 13 6 3.9981 -6.4104 7.5567 14 1 4.8460 -5.8272 7.9162 15 6 2.9398 -6.6891 8.6370 16 6 3.7372 -7.9618 8.9758 17 1 4.5133 -7.8044 9.7247 18 6 2.8698 -9.1575 9.2744 19 7 3.2767 -10.2795 9.8020 20 6 2.2341 -11.1145 9.9246 21 6 1.1412 -10.4889 9.4476 22 7 1.5438 -9.2474 9.0351 23 6 4.2596 -7.9256 7.5300 24 6 3.1002 -0.6603 3.3201 25 35 4.0683 0.2965 4.6329 26 6 2.6386 -0.0108 2.1910 27 1 -0.3932 0.4417 0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 1.5616 2.4679 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 1.1316 -2.6043 0.6451 32 1 1.9403 -3.7666 2.6588 33 1 1.9339 -4.1987 4.7034 34 1 3.4551 -4.5812 3.8622 35 1 2.9581 -6.4811 5.7071 36 1 2.9306 -5.9519 9.4399 37 1 1.9471 -6.8901 8.2342 38 1 2.2663 -12.1144 10.3315 39 1 0.1393 -10.8895 9.4003 40 1 0.9816 -8.5605 8.6437 41 1 3.6286 -8.4652 6.8239 42 1 5.3146 -8.1851 7.4403 43 1 2.8309 1.0436 2.0583 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:50 Heat of formation + Delta-G solvation = 23.983551 kcal Electronic energy + Delta-G solvation = -28525.992556 eV Core-core repulsion = 24200.809692 eV Total energy + Delta-G solvation = -4325.182864 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.052 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.09718 -41.70514 -40.94790 -39.60709 -38.84319 -37.32962 -34.80318 -33.50090 -33.45386 -32.15464 -30.92011 -30.35020 -29.43697 -26.82802 -26.51782 -25.83585 -24.02532 -22.71666 -22.44214 -21.91127 -21.53742 -20.75232 -19.57745 -19.00297 -18.55178 -18.12587 -17.51900 -17.36352 -16.83732 -16.50782 -16.43424 -16.20839 -15.80048 -15.65930 -15.59881 -15.32318 -14.91753 -14.80889 -14.64268 -14.31357 -14.13062 -14.01470 -13.89143 -13.55253 -13.42838 -13.38050 -12.54918 -12.39962 -12.35532 -12.19705 -12.03037 -11.86616 -11.73678 -11.71862 -11.19892 -11.04261 -11.01337 -10.97341 -10.63519 -10.17869 -9.99697 -9.34864 -9.32107 -4.95560 -0.02709 0.08501 0.64483 1.08975 1.28012 1.40355 1.44152 1.55468 1.91870 2.12489 2.19386 2.39565 2.51221 3.26302 3.37127 3.41471 3.50798 3.53411 3.58474 3.75886 3.78453 3.84627 3.97768 4.03744 4.08328 4.08879 4.25621 4.34575 4.49142 4.50574 4.56388 4.58827 4.65350 4.67900 4.78248 4.79768 4.85644 4.97629 5.03941 5.06462 5.17647 5.30606 5.43199 5.48627 5.79042 6.06061 6.44249 6.47111 6.49434 7.13022 7.14338 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.061 4.061 3 Si 0.735 3.265 4 C -0.148 4.148 5 C -0.032 4.032 6 C -0.195 4.195 7 C 0.151 3.849 8 O -0.304 6.304 9 C 0.032 3.968 10 C 0.514 3.486 11 O -0.565 6.565 12 N -0.699 5.699 13 C 0.128 3.872 14 H 0.103 0.897 15 C -0.140 4.140 16 C -0.025 4.025 17 H 0.116 0.884 18 C 0.212 3.788 19 N -0.533 5.533 20 C -0.064 4.064 21 C -0.041 4.041 22 N -0.555 5.555 23 C -0.118 4.118 24 C -0.140 4.140 25 Br -0.051 7.051 26 C -0.057 4.057 27 H 0.386 0.614 28 H 0.138 0.862 29 H -0.297 1.297 30 H -0.287 1.287 31 H 0.157 0.843 32 H 0.174 0.826 33 H 0.130 0.870 34 H 0.130 0.870 35 H 0.422 0.578 36 H 0.077 0.923 37 H 0.102 0.898 38 H 0.176 0.824 39 H 0.210 0.790 40 H 0.432 0.568 41 H 0.103 0.897 42 H 0.086 0.914 43 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.008 -4.947 -5.432 8.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.172 4.172 3 Si 0.642 3.358 4 C -0.150 4.150 5 C -0.051 4.051 6 C -0.214 4.214 7 C 0.103 3.897 8 O -0.216 6.216 9 C -0.046 4.046 10 C 0.300 3.700 11 O -0.443 6.443 12 N -0.352 5.352 13 C 0.023 3.977 14 H 0.121 0.879 15 C -0.179 4.179 16 C -0.046 4.046 17 H 0.134 0.866 18 C -0.052 4.052 19 N -0.253 5.253 20 C -0.211 4.211 21 C -0.176 4.176 22 N -0.160 5.160 23 C -0.157 4.157 24 C -0.220 4.220 25 Br 0.034 6.966 26 C -0.076 4.076 27 H 0.236 0.764 28 H 0.155 0.845 29 H -0.225 1.225 30 H -0.214 1.214 31 H 0.175 0.825 32 H 0.191 0.809 33 H 0.147 0.853 34 H 0.148 0.852 35 H 0.260 0.740 36 H 0.096 0.904 37 H 0.120 0.880 38 H 0.193 0.807 39 H 0.227 0.773 40 H 0.273 0.727 41 H 0.121 0.879 42 H 0.105 0.895 43 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -3.404 -3.684 -4.524 6.754 hybrid contribution -2.423 -0.149 0.021 2.427 sum -5.826 -3.834 -4.503 8.302 Atomic orbital electron populations 1.86584 1.18151 1.80125 1.50262 1.24890 0.83471 1.10276 0.98553 0.94288 0.90992 0.73878 0.76654 1.20211 1.02001 0.95512 0.97262 1.21232 0.94407 0.93057 0.96367 1.21612 1.02597 1.02404 0.94739 1.18797 0.93538 0.90523 0.86877 1.86245 1.73410 1.23438 1.38548 1.22858 1.03954 0.80423 0.97319 1.20518 0.79456 0.82783 0.87237 1.90799 1.42366 1.58359 1.52749 1.45617 1.57505 1.08741 1.23378 1.22354 0.97028 0.94328 0.84014 0.87901 1.23572 0.99134 0.95975 0.99219 1.20805 0.96746 0.88118 0.98953 0.86596 1.23104 0.83134 0.96691 1.02304 1.70182 1.32768 1.02603 1.19792 1.22743 0.89191 1.01616 1.07581 1.23275 1.02197 0.86365 1.05749 1.43224 1.09298 1.15027 1.48426 1.23348 1.03531 0.93913 0.94916 1.21131 1.09318 0.93136 0.98449 1.96777 1.73025 1.73519 1.53242 1.20958 0.95512 1.00102 0.91076 0.76447 0.84477 1.22453 1.21360 0.82541 0.80883 0.85254 0.85204 0.74013 0.90392 0.88004 0.80698 0.77326 0.72715 0.87898 0.89539 0.83863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.64 12.83 -148.98 -1.91 -1.27 16 2 C -0.06 0.24 2.80 71.24 0.20 0.44 16 3 Si 0.74 -1.55 29.88 68.60 2.05 0.50 16 4 C -0.15 0.47 5.35 -19.85 -0.11 0.36 16 5 C -0.03 0.18 9.68 22.26 0.22 0.40 16 6 C -0.19 1.18 9.04 22.36 0.20 1.38 16 7 C 0.15 0.10 6.68 22.52 0.15 0.25 16 8 O -0.30 -0.85 9.01 -73.54 -0.66 -1.52 16 9 C 0.03 -0.22 5.22 71.24 0.37 0.15 16 10 C 0.51 -0.54 7.91 87.66 0.69 0.16 16 11 O -0.57 -6.32 16.12 16.01 0.26 -6.06 16 12 N -0.70 5.83 5.36 -440.03 -2.36 3.47 16 13 C 0.13 -0.70 4.21 45.52 0.19 -0.51 16 14 H 0.10 -0.03 7.50 -2.38 -0.02 -0.05 16 15 C -0.14 0.94 7.37 31.18 0.23 1.17 16 16 C -0.03 0.09 4.29 -10.96 -0.05 0.04 16 17 H 0.12 -0.19 8.14 -2.39 -0.02 -0.21 16 18 C 0.21 0.22 7.36 138.13 1.02 1.24 16 19 N -0.53 -4.24 11.25 -188.14 -2.12 -6.35 16 20 C -0.06 -0.24 11.87 83.52 0.99 0.75 16 21 C -0.04 0.12 12.04 83.09 1.00 1.12 16 22 N -0.55 2.50 5.94 -186.27 -1.11 1.39 16 23 C -0.12 0.81 7.38 31.12 0.23 1.04 16 24 C -0.14 -0.49 6.24 22.40 0.14 -0.35 16 25 Br -0.05 -0.38 33.16 -20.37 -0.68 -1.05 16 26 C -0.06 0.00 8.40 22.27 0.19 0.19 16 27 H 0.39 -2.27 8.70 -74.06 -0.64 -2.91 16 28 H 0.14 -0.93 7.96 -2.39 -0.02 -0.95 16 29 H -0.30 -1.56 7.11 99.48 0.71 -0.86 16 30 H -0.29 -0.79 7.01 99.48 0.70 -0.09 16 31 H 0.16 -1.46 8.06 -2.91 -0.02 -1.49 16 32 H 0.17 -2.38 6.30 -2.91 -0.02 -2.40 16 33 H 0.13 -1.80 7.65 -2.39 -0.02 -1.82 16 34 H 0.13 -1.77 7.67 -2.39 -0.02 -1.79 16 35 H 0.42 -6.78 8.71 -92.71 -0.81 -7.59 16 36 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 37 H 0.10 -1.14 6.65 -2.39 -0.02 -1.15 16 38 H 0.18 0.13 8.06 -2.91 -0.02 0.10 16 39 H 0.21 -2.11 8.06 -2.91 -0.02 -2.14 16 40 H 0.43 -4.86 7.54 -92.70 -0.70 -5.55 16 41 H 0.10 -0.98 8.06 -2.39 -0.02 -1.00 16 42 H 0.09 -0.49 8.14 -2.38 -0.02 -0.51 16 43 H 0.14 -0.18 4.84 -2.91 -0.01 -0.20 16 Total: 0.00 -32.13 383.67 -1.88 -34.01 By element: Atomic # 1 Polarization: -29.93 SS G_CDS: -1.02 Total: -30.94 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: 5.67 Total: 7.82 kcal Atomic # 7 Polarization: 4.10 SS G_CDS: -5.58 Total: -1.49 kcal Atomic # 8 Polarization: -6.53 SS G_CDS: -2.32 Total: -8.85 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: 2.05 Total: 0.50 kcal Atomic # 35 Polarization: -0.38 SS G_CDS: -0.68 Total: -1.05 kcal Total: -32.13 -1.88 -34.01 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.989 kcal (2) G-P(sol) polarization free energy of solvation -32.130 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.876 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.006 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds