Wall clock time and date at job start Tue Mar 9 2021 13:05:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35643 * 117.00323 * 2 1 4 4 C 1.40140 * 120.15484 * 179.97438 * 3 2 1 5 5 C 1.47542 * 120.18699 * 0.02562 * 4 3 2 6 6 O 1.21590 * 119.99652 * 359.71859 * 5 4 3 7 7 N 1.34776 * 119.99899 * 179.71884 * 5 4 3 8 8 C 1.46497 * 119.99865 * 179.97438 * 7 5 4 9 9 H 1.09001 * 109.46972 * 35.00130 * 8 7 5 10 10 C 1.53006 * 109.47139 * 155.00342 * 8 7 5 11 11 C 1.52996 * 109.46939 * 59.99574 * 10 8 7 12 12 C 1.53004 * 109.47083 * 60.00740 * 11 10 8 13 13 H 1.08998 * 109.47355 * 59.99435 * 12 11 10 14 14 S 1.81398 * 109.47358 * 179.97438 * 12 11 10 15 15 C 1.81391 * 101.92304 * 179.97438 * 14 12 11 16 16 O 1.42105 * 108.57879 * 65.50754 * 14 12 11 17 17 O 1.42097 * 108.57629 * 294.48515 * 14 12 11 18 18 C 1.53006 * 109.46629 * 299.99450 * 12 11 10 19 19 C 1.52993 * 109.47148 * 60.00156 * 18 12 11 20 20 C 1.39708 * 119.61985 * 179.72269 * 4 3 2 21 21 C 1.37781 * 119.90615 * 0.25654 * 20 4 3 22 22 C 1.50705 * 119.84854 * 179.97438 * 21 20 4 23 23 O 1.42902 * 109.47344 * 300.00289 * 22 21 20 24 24 Si 1.86299 * 109.47145 * 180.02562 * 22 21 20 25 25 C 1.38544 * 120.30374 * 359.97438 * 21 20 4 26 26 C 1.38053 * 120.39060 * 0.02562 * 25 21 20 27 27 H 1.08998 * 109.47500 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.46798 * 299.99656 * 1 2 3 29 29 H 1.08997 * 109.47444 * 60.00023 * 1 2 3 30 30 H 0.97003 * 119.99963 * 0.02562 * 7 5 4 31 31 H 1.08999 * 109.46628 * 299.99953 * 10 8 7 32 32 H 1.08998 * 109.47240 * 179.97438 * 10 8 7 33 33 H 1.08998 * 109.47486 * 300.00255 * 11 10 8 34 34 H 1.09001 * 109.46670 * 179.97438 * 11 10 8 35 35 H 1.09003 * 109.47583 * 300.00163 * 15 14 12 36 36 H 1.09003 * 109.47643 * 59.99714 * 15 14 12 37 37 H 1.09003 * 109.47254 * 179.97438 * 15 14 12 38 38 H 1.09004 * 109.47046 * 179.97438 * 18 12 11 39 39 H 1.08998 * 109.47240 * 300.00055 * 18 12 11 40 40 H 1.09006 * 109.47262 * 179.97438 * 19 18 12 41 41 H 1.09008 * 109.47118 * 59.99778 * 19 18 12 42 42 H 1.08001 * 120.04391 * 180.27590 * 20 4 3 43 43 H 1.09001 * 109.47056 * 59.99902 * 22 21 20 44 44 H 0.96695 * 113.99875 * 179.97438 * 23 22 21 45 45 H 1.48506 * 109.99975 * 298.68100 * 24 22 21 46 46 H 1.48493 * 110.00123 * 60.00134 * 24 22 21 47 47 H 1.08001 * 119.80548 * 180.02562 * 25 21 20 48 48 H 1.08001 * 119.96193 * 180.02562 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2550 0.0530 0.0005 6 8 3.7094 -1.0336 0.0052 7 7 5.6005 0.1315 -0.0047 8 6 6.4056 -1.0924 -0.0041 9 1 5.8998 -1.8603 -0.5895 10 6 7.7759 -0.8017 -0.6196 11 6 8.4857 0.2761 0.2021 12 6 8.6663 -0.2149 1.6399 13 1 9.2654 -1.1255 1.6403 14 16 9.5086 1.0627 2.6139 15 6 9.6127 0.2808 4.2474 16 8 8.6560 2.1956 2.7083 17 8 10.8251 1.2258 2.1047 18 6 7.2960 -0.5056 2.2554 19 6 6.5862 -1.5834 1.4337 20 6 4.0668 2.5362 -0.0053 21 6 3.3039 3.6835 -0.0063 22 6 3.9769 5.0319 -0.0120 23 8 4.7959 5.1605 1.1519 24 14 2.6827 6.3720 -0.0112 25 6 1.9207 3.6032 -0.0019 26 6 1.2925 2.3740 0.0039 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 6.0357 0.9984 -0.0080 31 1 7.6472 -0.4519 -1.6439 32 1 8.3751 -1.7122 -0.6188 33 1 7.8867 1.1867 0.2017 34 1 9.4621 0.4829 -0.2362 35 1 8.6085 0.0597 4.6091 36 1 10.1834 -0.6448 4.1715 37 1 10.1092 0.9573 4.9431 38 1 7.4247 -0.8559 3.2795 39 1 6.6970 0.4050 2.2549 40 1 5.6101 -1.7908 1.8725 41 1 7.1853 -2.4941 1.4341 42 1 5.1447 2.6036 -0.0095 43 1 4.5963 5.1250 -0.9041 44 1 5.2610 6.0060 1.2140 45 1 1.8440 6.2689 -1.2324 46 1 1.8321 6.2558 1.2005 47 1 1.3305 4.5077 -0.0031 48 1 0.2139 2.3195 0.0068 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14783808_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:58 Heat of formation + Delta-G solvation = -136.023662 kcal Electronic energy + Delta-G solvation = -33260.742439 eV Core-core repulsion = 28796.455872 eV Total energy + Delta-G solvation = -4464.286567 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 1.75 seconds Orbital eigenvalues (eV) -41.82202 -40.75486 -39.10836 -38.87571 -37.97492 -37.17866 -37.01684 -34.89252 -32.95602 -32.29165 -31.96535 -30.92220 -30.31307 -28.58691 -26.11590 -25.43984 -24.16153 -23.98465 -22.70679 -21.55317 -20.39386 -19.81067 -19.50208 -18.50585 -18.24376 -18.06070 -17.67112 -17.15436 -16.98645 -16.83960 -16.44740 -16.39657 -16.15289 -15.95745 -15.57322 -15.44510 -15.09401 -14.85056 -14.82643 -14.40901 -14.27278 -14.12250 -14.10964 -13.94773 -13.86562 -13.56507 -13.45841 -13.42484 -13.06495 -12.98204 -12.96499 -12.63984 -12.48240 -12.40765 -12.24949 -12.10148 -12.05528 -11.94729 -11.90324 -11.59563 -10.99045 -10.74310 -10.32550 -10.21733 -9.97630 -9.24553 -5.01270 -1.07088 -0.24953 0.21410 1.24071 1.58875 1.65762 1.87880 1.91565 2.16713 2.22029 2.56110 2.73088 2.88328 3.23072 3.31509 3.31690 3.50093 3.58156 3.63704 3.73411 3.76494 3.79593 3.91006 3.97379 4.00320 4.02757 4.09580 4.18410 4.19178 4.19914 4.25454 4.28180 4.35848 4.46531 4.52955 4.56518 4.59467 4.65275 4.73570 4.85013 4.86311 4.90359 4.92643 5.00260 5.06467 5.12190 5.26870 5.49047 5.55242 6.28210 6.56555 6.63166 7.35913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.278 6.278 3 C 0.192 3.808 4 C -0.175 4.175 5 C 0.564 3.436 6 O -0.515 6.515 7 N -0.726 5.726 8 C 0.146 3.854 9 H 0.096 0.904 10 C -0.119 4.119 11 C -0.108 4.108 12 C -0.571 4.571 13 H 0.141 0.859 14 S 2.415 3.585 15 C -0.658 4.658 16 O -0.931 6.931 17 O -0.939 6.939 18 C -0.110 4.110 19 C -0.123 4.123 20 C -0.016 4.016 21 C -0.121 4.121 22 C -0.067 4.067 23 O -0.543 6.543 24 Si 0.682 3.318 25 C -0.054 4.054 26 C -0.213 4.213 27 H 0.106 0.894 28 H 0.058 0.942 29 H 0.058 0.942 30 H 0.398 0.602 31 H 0.080 0.920 32 H 0.087 0.913 33 H 0.076 0.924 34 H 0.088 0.912 35 H 0.130 0.870 36 H 0.129 0.871 37 H 0.131 0.869 38 H 0.078 0.922 39 H 0.085 0.915 40 H 0.078 0.922 41 H 0.078 0.922 42 H 0.137 0.863 43 H 0.076 0.924 44 H 0.384 0.616 45 H -0.255 1.255 46 H -0.250 1.250 47 H 0.125 0.875 48 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.320 1.783 -0.210 1.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.143 3.857 4 C -0.178 4.178 5 C 0.352 3.648 6 O -0.391 6.391 7 N -0.381 5.381 8 C 0.041 3.959 9 H 0.114 0.886 10 C -0.158 4.158 11 C -0.146 4.146 12 C -0.680 4.680 13 H 0.159 0.841 14 S 2.598 3.402 15 C -0.807 4.807 16 O -0.929 6.929 17 O -0.936 6.936 18 C -0.148 4.148 19 C -0.163 4.163 20 C -0.035 4.035 21 C -0.122 4.122 22 C -0.178 4.178 23 O -0.350 6.350 24 Si 0.583 3.417 25 C -0.072 4.072 26 C -0.231 4.231 27 H 0.124 0.876 28 H 0.076 0.924 29 H 0.076 0.924 30 H 0.235 0.765 31 H 0.099 0.901 32 H 0.105 0.895 33 H 0.095 0.905 34 H 0.106 0.894 35 H 0.149 0.851 36 H 0.148 0.852 37 H 0.149 0.851 38 H 0.096 0.904 39 H 0.104 0.896 40 H 0.096 0.904 41 H 0.096 0.904 42 H 0.155 0.845 43 H 0.094 0.906 44 H 0.232 0.768 45 H -0.180 1.180 46 H -0.175 1.175 47 H 0.142 0.858 48 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.770 1.193 -0.346 1.462 hybrid contribution -0.146 -0.715 0.274 0.780 sum -0.916 0.478 -0.072 1.036 Atomic orbital electron populations 1.23230 0.78263 1.04733 1.01412 1.86370 1.21127 1.25080 1.86277 1.19036 0.90937 0.84930 0.90764 1.19349 0.90856 0.93951 1.13691 1.17901 0.81873 0.88552 0.76479 1.90837 1.71518 1.28476 1.48254 1.46057 1.05814 1.09781 1.76464 1.20953 0.90930 0.87375 0.96620 0.88622 1.21773 0.94935 0.99789 0.99280 1.21360 1.02797 0.99457 0.91032 1.30249 1.09731 1.18435 1.09573 0.84091 1.08138 0.75876 0.77680 0.78529 1.30297 1.11809 1.14874 1.23767 1.93618 1.68184 1.45232 1.85825 1.93614 1.36601 1.85191 1.78189 1.21457 0.92425 1.01834 0.99125 1.21861 1.01485 0.97824 0.95119 1.20970 0.99989 0.89743 0.92766 1.19127 0.92766 0.94142 1.06152 1.24584 1.01796 1.00328 0.91101 1.86512 1.64226 1.42131 1.42120 0.95190 0.79466 0.86428 0.80626 1.20849 0.93795 0.97143 0.95408 1.21167 1.00675 0.91473 1.09803 0.87595 0.92379 0.92373 0.76525 0.90148 0.89490 0.90518 0.89354 0.85104 0.85242 0.85088 0.90365 0.89623 0.90362 0.90352 0.84485 0.90638 0.76848 1.17992 1.17484 0.85783 0.84205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.28 -1.22 8.57 -40.51 -0.35 -1.57 16 3 C 0.19 0.73 6.70 -38.69 -0.26 0.47 16 4 C -0.17 -0.62 5.89 -104.84 -0.62 -1.23 16 5 C 0.56 2.22 7.73 -12.47 -0.10 2.13 16 6 O -0.52 -3.72 14.82 -16.59 -0.25 -3.97 16 7 N -0.73 -0.42 4.18 -54.84 -0.23 -0.65 16 8 C 0.15 -0.08 2.78 -67.93 -0.19 -0.27 16 9 H 0.10 0.09 7.58 -51.93 -0.39 -0.30 16 10 C -0.12 0.31 5.61 -26.73 -0.15 0.16 16 11 C -0.11 0.26 5.04 -26.73 -0.13 0.13 16 12 C -0.57 1.74 2.58 -26.73 -0.07 1.67 16 13 H 0.14 -0.77 8.14 -51.92 -0.42 -1.19 16 14 S 2.41 -2.35 4.88 -107.50 -0.52 -2.87 16 15 C -0.66 2.39 10.17 101.05 1.03 3.42 16 16 O -0.93 -2.37 17.91 -57.83 -1.04 -3.41 16 17 O -0.94 -2.69 18.10 -57.83 -1.05 -3.73 16 18 C -0.11 0.26 4.80 -26.73 -0.13 0.13 16 19 C -0.12 0.15 5.60 -26.73 -0.15 0.00 16 20 C -0.02 -0.03 9.09 -39.20 -0.36 -0.39 16 21 C -0.12 -0.24 5.42 -104.67 -0.57 -0.80 16 22 C -0.07 0.03 2.81 36.01 0.10 0.13 16 23 O -0.54 -0.05 12.74 -35.23 -0.45 -0.50 16 24 Si 0.68 -0.93 29.77 -169.99 -5.06 -5.99 16 25 C -0.05 -0.11 8.66 -39.54 -0.34 -0.45 16 26 C -0.21 -0.42 9.03 -39.47 -0.36 -0.78 16 27 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.06 -0.07 7.65 -51.93 -0.40 -0.46 16 29 H 0.06 -0.08 7.67 -51.93 -0.40 -0.47 16 30 H 0.40 -0.42 4.90 -40.82 -0.20 -0.62 16 31 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.08 -0.19 6.50 -51.93 -0.34 -0.53 16 34 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 35 H 0.13 -0.66 6.87 -51.92 -0.36 -1.01 16 36 H 0.13 -0.70 8.14 -51.92 -0.42 -1.13 16 37 H 0.13 -0.47 8.14 -51.92 -0.42 -0.90 16 38 H 0.08 -0.34 6.56 -51.93 -0.34 -0.68 16 39 H 0.09 -0.10 7.52 -51.93 -0.39 -0.49 16 40 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 41 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 42 H 0.14 -0.02 6.40 -52.49 -0.34 -0.36 16 43 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 44 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 45 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 46 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 47 H 0.12 0.13 4.85 -52.49 -0.25 -0.13 16 48 H 0.14 -0.05 6.30 -52.49 -0.33 -0.38 16 LS Contribution 389.67 15.07 5.87 5.87 Total: 0.00 -14.47 389.67 -11.12 -25.59 By element: Atomic # 1 Polarization: -7.32 SS G_CDS: -6.75 Total: -14.07 kcal Atomic # 6 Polarization: 6.60 SS G_CDS: -1.30 Total: 5.30 kcal Atomic # 7 Polarization: -0.42 SS G_CDS: -0.23 Total: -0.65 kcal Atomic # 8 Polarization: -10.05 SS G_CDS: -3.12 Total: -13.17 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.06 Total: -5.99 kcal Atomic # 16 Polarization: -2.35 SS G_CDS: -0.52 Total: -2.87 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -14.47 -11.12 -25.59 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14783808_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.437 kcal (2) G-P(sol) polarization free energy of solvation -14.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.115 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.587 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.75 seconds