Wall clock time and date at job start Tue Mar 9 2021 13:06:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.39287 * 121.03190 * 2 1 4 4 C 1.46500 * 134.19829 * 359.95215 * 3 2 1 5 5 C 1.50698 * 126.59862 * 0.27121 * 4 3 2 6 6 O 1.42900 * 109.47057 * 75.02391 * 5 4 3 7 7 Si 1.86295 * 109.47126 * 195.02822 * 5 4 3 8 8 C 1.34174 * 106.80224 * 180.31266 * 4 3 2 9 9 N 1.36945 * 109.95169 * 359.97438 * 8 4 3 10 10 C 1.37152 * 110.11874 * 0.02562 * 9 8 4 11 11 N 1.32820 * 132.97498 * 180.02562 * 10 9 8 12 12 C 1.31304 * 121.89357 * 179.97438 * 11 10 9 13 13 C 1.39749 * 121.03112 * 179.75113 * 2 1 3 14 14 C 1.47664 * 120.45538 * 359.97438 * 13 2 1 15 15 O 1.21574 * 119.99760 * 353.76258 * 14 13 2 16 16 N 1.34773 * 120.00129 * 173.76415 * 14 13 2 17 17 C 1.46506 * 119.99810 * 179.97438 * 16 14 13 18 18 H 1.08991 * 109.47380 * 34.99854 * 17 16 14 19 19 C 1.52998 * 109.46838 * 154.99891 * 17 16 14 20 20 C 1.53001 * 109.47422 * 59.99751 * 19 17 16 21 21 C 1.53008 * 109.46835 * 59.99678 * 20 19 17 22 22 H 1.09002 * 109.46718 * 60.00265 * 21 20 19 23 23 S 1.81404 * 109.46953 * 180.02562 * 21 20 19 24 24 C 1.81402 * 101.91799 * 180.02562 * 23 21 20 25 25 O 1.42100 * 108.57886 * 294.48856 * 23 21 20 26 26 O 1.42103 * 108.57801 * 65.51596 * 23 21 20 27 27 C 1.52998 * 109.47378 * 300.00349 * 21 20 19 28 28 C 1.52995 * 109.46901 * 274.99733 * 17 16 14 29 29 H 1.09000 * 109.47006 * 263.96886 * 1 2 3 30 30 H 1.09002 * 109.46849 * 23.96290 * 1 2 3 31 31 H 1.08991 * 109.46863 * 143.96419 * 1 2 3 32 32 H 1.09003 * 109.47160 * 315.02861 * 5 4 3 33 33 H 0.96702 * 114.00006 * 60.00737 * 6 5 4 34 34 H 1.48501 * 110.00160 * 58.67996 * 7 5 4 35 35 H 1.48498 * 109.99989 * 179.97438 * 7 5 4 36 36 H 1.07995 * 125.02568 * 179.97438 * 8 4 3 37 37 H 0.97007 * 124.94268 * 179.97438 * 9 8 4 38 38 H 1.08006 * 119.31310 * 180.02562 * 12 11 10 39 39 H 0.97001 * 120.00166 * 359.97438 * 16 14 13 40 40 H 1.09000 * 109.47401 * 179.97438 * 19 17 16 41 41 H 1.09001 * 109.47485 * 300.00085 * 19 17 16 42 42 H 1.09002 * 109.47589 * 179.97438 * 20 19 17 43 43 H 1.09002 * 109.47251 * 300.00269 * 20 19 17 44 44 H 1.08998 * 109.47196 * 60.00126 * 24 23 21 45 45 H 1.09004 * 109.46927 * 179.97438 * 24 23 21 46 46 H 1.08993 * 109.47351 * 299.99867 * 24 23 21 47 47 H 1.08997 * 109.47399 * 180.02562 * 27 21 20 48 48 H 1.08999 * 109.46689 * 299.99900 * 27 21 20 49 49 H 1.08996 * 109.47358 * 60.00162 * 28 17 16 50 50 H 1.08996 * 109.47324 * 180.02562 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1935 0.0000 4 6 1.8516 2.6101 -0.0009 5 6 0.4527 3.1705 0.0036 6 8 -0.1139 3.0265 1.3076 7 14 0.5052 4.9753 -0.4550 8 6 2.9947 3.3126 -0.0074 9 7 4.0668 2.4605 -0.0101 10 6 3.6349 1.1588 -0.0060 11 7 4.2720 -0.0066 -0.0060 12 6 3.6267 -1.1501 -0.0008 13 6 2.2275 -1.1975 0.0052 14 6 1.5226 -2.4950 0.0114 15 8 0.3127 -2.5289 0.1264 16 7 2.2203 -3.6416 -0.1104 17 6 1.5209 -4.9289 -0.1037 18 1 0.5556 -4.8205 -0.5979 19 6 2.3607 -5.9694 -0.8474 20 6 3.7159 -6.1215 -0.1536 21 6 3.5009 -6.5775 1.2910 22 1 2.9806 -7.5353 1.2960 23 16 5.1076 -6.7572 2.1138 24 6 4.6192 -7.2940 3.7763 25 8 5.8208 -7.8152 1.4883 26 8 5.7124 -5.4750 2.2109 27 6 2.6611 -5.5371 2.0347 28 6 1.3060 -5.3849 1.3408 29 1 -0.3633 -0.1080 1.0220 30 1 -0.3633 0.9391 -0.4174 31 1 -0.3633 -0.8310 -0.6045 32 1 -0.1578 2.6295 -0.7195 33 1 0.3786 3.4835 2.0031 34 1 1.1216 5.1410 -1.7958 35 1 -0.8684 5.5396 -0.4548 36 1 3.0598 4.3906 -0.0100 37 1 4.9965 2.7374 -0.0151 38 1 4.1870 -2.0734 -0.0006 39 1 3.1856 -3.6145 -0.2025 40 1 1.8407 -6.9273 -0.8420 41 1 2.5139 -5.6445 -1.8765 42 1 4.3140 -6.8631 -0.6832 43 1 4.2362 -5.1637 -0.1586 44 1 4.0666 -8.2310 3.7078 45 1 5.5101 -7.4418 4.3867 46 1 3.9875 -6.5323 4.2332 47 1 2.5084 -5.8617 3.0639 48 1 3.1815 -4.5793 2.0297 49 1 0.7078 -4.6437 1.8707 50 1 0.7861 -6.3429 1.3459 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14783808_12890568.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:25 Heat of formation + Delta-G solvation = -57.555728 kcal Electronic energy + Delta-G solvation = -35917.626104 eV Core-core repulsion = 31232.582631 eV Total energy + Delta-G solvation = -4685.043472 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.144 amu Computer time = 3.52 seconds Orbital eigenvalues (eV) -42.82577 -41.36443 -39.61120 -38.50659 -38.01235 -37.70926 -37.05189 -35.31404 -34.67918 -32.35756 -32.13544 -31.75047 -30.55190 -30.14075 -28.74524 -26.49724 -24.91464 -24.30184 -24.02425 -23.69055 -22.13965 -20.72844 -20.47068 -19.85368 -19.25544 -18.87010 -18.13349 -17.75025 -17.50472 -17.19160 -17.04427 -16.80251 -16.62028 -16.45123 -16.21828 -15.85066 -15.64784 -15.40084 -15.20906 -14.99468 -14.88470 -14.58471 -14.30350 -14.16741 -14.12399 -14.04077 -13.83882 -13.72326 -13.58916 -13.48843 -13.45894 -13.16908 -13.10052 -13.01487 -12.98434 -12.64870 -12.43865 -12.26330 -12.08768 -12.02486 -11.97597 -11.63113 -11.10180 -11.02633 -11.00370 -10.42925 -10.16599 -10.07363 -9.56315 -9.10764 -5.12682 -1.10452 -0.20287 -0.02288 1.24181 1.39531 1.58235 1.62610 1.66368 1.94685 1.95053 2.10730 2.53186 2.84529 2.88258 3.19502 3.27822 3.31057 3.45425 3.54171 3.58648 3.63498 3.69765 3.73486 3.75869 3.80898 3.86822 3.95388 3.99157 4.10654 4.15349 4.21001 4.25636 4.29982 4.31885 4.41791 4.49231 4.57119 4.68301 4.70601 4.79139 4.81736 4.85996 4.88487 4.94914 5.00823 5.06527 5.09638 5.22426 5.39006 5.44757 5.58561 5.80154 6.12524 6.47156 6.61923 6.89497 7.25355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C 0.084 3.916 3 C -0.150 4.150 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.537 6.537 7 Si 0.685 3.315 8 C 0.069 3.931 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.502 5.502 12 C 0.181 3.819 13 C -0.236 4.236 14 C 0.574 3.426 15 O -0.529 6.529 16 N -0.725 5.725 17 C 0.145 3.855 18 H 0.097 0.903 19 C -0.119 4.119 20 C -0.109 4.109 21 C -0.571 4.571 22 H 0.142 0.858 23 S 2.415 3.585 24 C -0.658 4.658 25 O -0.938 6.938 26 O -0.934 6.934 27 C -0.110 4.110 28 C -0.123 4.123 29 H 0.088 0.912 30 H 0.066 0.934 31 H 0.096 0.904 32 H 0.116 0.884 33 H 0.378 0.622 34 H -0.255 1.255 35 H -0.253 1.253 36 H 0.186 0.814 37 H 0.426 0.574 38 H 0.162 0.838 39 H 0.398 0.602 40 H 0.087 0.913 41 H 0.080 0.920 42 H 0.088 0.912 43 H 0.077 0.923 44 H 0.129 0.871 45 H 0.131 0.869 46 H 0.130 0.870 47 H 0.078 0.922 48 H 0.085 0.915 49 H 0.079 0.921 50 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.120 1.680 1.940 2.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.076 3.924 3 C -0.157 4.157 4 C -0.189 4.189 5 C -0.147 4.147 6 O -0.342 6.342 7 Si 0.586 3.414 8 C -0.057 4.057 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.215 5.215 12 C 0.012 3.988 13 C -0.243 4.243 14 C 0.362 3.638 15 O -0.406 6.406 16 N -0.379 5.379 17 C 0.041 3.959 18 H 0.115 0.885 19 C -0.158 4.158 20 C -0.147 4.147 21 C -0.680 4.680 22 H 0.160 0.840 23 S 2.598 3.402 24 C -0.807 4.807 25 O -0.935 6.935 26 O -0.931 6.931 27 C -0.149 4.149 28 C -0.163 4.163 29 H 0.106 0.894 30 H 0.085 0.915 31 H 0.114 0.886 32 H 0.133 0.867 33 H 0.225 0.775 34 H -0.180 1.180 35 H -0.177 1.177 36 H 0.203 0.797 37 H 0.264 0.736 38 H 0.179 0.821 39 H 0.235 0.765 40 H 0.105 0.895 41 H 0.099 0.901 42 H 0.107 0.893 43 H 0.095 0.905 44 H 0.148 0.852 45 H 0.149 0.851 46 H 0.149 0.851 47 H 0.097 0.903 48 H 0.103 0.897 49 H 0.097 0.903 50 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.448 2.213 0.788 2.391 hybrid contribution -0.506 -0.770 0.220 0.947 sum -0.057 1.443 1.007 1.761 Atomic orbital electron populations 1.21158 0.88764 1.03473 1.04339 1.19915 0.97093 0.89192 0.86197 1.19473 0.92817 0.93553 1.09846 1.20675 0.95324 0.91098 1.11806 1.24509 0.90466 1.10552 0.89154 1.86531 1.53678 1.77880 1.16117 0.95310 0.84426 0.76781 0.84839 1.21719 0.84988 0.95779 1.03202 1.41517 1.09626 1.02713 1.63686 1.18507 0.89319 0.85916 0.98766 1.66443 1.40545 0.95988 1.18518 1.22532 0.90098 0.94500 0.91664 1.20434 0.94742 0.93777 1.15333 1.17865 0.86799 0.83246 0.75921 1.90755 1.13501 1.87072 1.49312 1.46065 1.10861 1.05548 1.75389 1.20970 0.96874 0.81955 0.96100 0.88515 1.21776 0.94870 0.99753 0.99419 1.21370 0.99470 1.02628 0.91239 1.30253 1.21212 1.08611 1.07928 0.84029 1.08134 0.77915 0.75741 0.78429 1.30292 1.13306 1.12941 1.24172 1.93617 1.68710 1.57054 1.74163 1.93607 1.73165 1.40327 1.86009 1.21461 0.96913 0.97993 0.98494 1.21860 0.96145 1.02580 0.95689 0.89413 0.91486 0.88593 0.86684 0.77532 1.17973 1.17712 0.79738 0.73563 0.82121 0.76524 0.89471 0.90103 0.89321 0.90497 0.85200 0.85082 0.85101 0.90323 0.89674 0.90273 0.90316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 47. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.36 8.68 36.01 0.31 -0.05 16 2 C 0.08 0.27 5.98 -103.67 -0.62 -0.35 16 3 C -0.15 -0.40 6.16 -105.12 -0.65 -1.05 16 4 C -0.18 -0.03 5.57 -102.73 -0.57 -0.60 16 5 C -0.04 0.02 2.08 36.00 0.07 0.09 16 6 O -0.54 0.05 12.88 -35.23 -0.45 -0.40 16 7 Si 0.69 -1.50 30.76 -169.99 -5.23 -6.73 16 8 C 0.07 -0.15 10.44 -16.70 -0.17 -0.32 16 9 N -0.57 0.46 6.04 -12.12 -0.07 0.39 16 10 C 0.31 0.77 8.42 -155.71 -1.31 -0.54 16 11 N -0.50 -1.57 10.37 -11.96 -0.12 -1.69 16 12 C 0.18 0.30 10.67 -17.11 -0.18 0.11 16 13 C -0.24 -0.56 5.89 -104.82 -0.62 -1.18 16 14 C 0.57 1.17 7.68 -12.41 -0.10 1.08 16 15 O -0.53 -2.44 13.16 5.30 0.07 -2.37 16 16 N -0.72 0.67 4.18 -54.81 -0.23 0.44 16 17 C 0.15 -0.26 2.78 -67.93 -0.19 -0.45 16 18 H 0.10 -0.04 7.58 -51.93 -0.39 -0.43 16 19 C -0.12 0.41 5.61 -26.73 -0.15 0.26 16 20 C -0.11 0.34 5.04 -26.73 -0.13 0.20 16 21 C -0.57 2.14 2.58 -26.73 -0.07 2.07 16 22 H 0.14 -0.86 8.14 -51.92 -0.42 -1.28 16 23 S 2.41 -3.44 4.88 -107.50 -0.52 -3.96 16 24 C -0.66 2.69 10.17 101.05 1.03 3.71 16 25 O -0.94 -2.46 18.10 -57.83 -1.05 -3.51 16 26 O -0.93 -1.93 17.91 -57.83 -1.04 -2.97 16 27 C -0.11 0.37 4.80 -26.73 -0.13 0.24 16 28 C -0.12 0.29 5.60 -26.73 -0.15 0.14 16 29 H 0.09 0.32 8.14 -51.93 -0.42 -0.11 16 30 H 0.07 0.15 5.06 -51.93 -0.26 -0.11 16 31 H 0.10 0.37 5.96 -51.93 -0.31 0.07 16 32 H 0.12 0.06 6.03 -51.93 -0.31 -0.26 16 33 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 34 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 35 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 36 H 0.19 -1.15 6.35 -52.49 -0.33 -1.48 16 37 H 0.43 -1.41 8.96 -40.82 -0.37 -1.78 16 38 H 0.16 -0.22 6.43 -52.48 -0.34 -0.56 16 39 H 0.40 -1.01 4.94 -40.82 -0.20 -1.21 16 40 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 41 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 42 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 43 H 0.08 -0.26 6.51 -51.93 -0.34 -0.60 16 44 H 0.13 -0.76 8.14 -51.93 -0.42 -1.18 16 45 H 0.13 -0.52 8.14 -51.92 -0.42 -0.94 16 46 H 0.13 -0.73 6.87 -51.93 -0.36 -1.09 16 47 H 0.08 -0.41 6.55 -51.93 -0.34 -0.75 16 48 H 0.08 -0.21 7.52 -51.93 -0.39 -0.60 16 49 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 50 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 LS Contribution 401.38 15.07 6.05 6.05 Total: 0.00 -15.04 401.38 -12.77 -27.81 By element: Atomic # 1 Polarization: -9.90 SS G_CDS: -6.55 Total: -16.45 kcal Atomic # 6 Polarization: 7.00 SS G_CDS: -3.63 Total: 3.38 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: -0.43 Total: -0.86 kcal Atomic # 8 Polarization: -6.78 SS G_CDS: -2.47 Total: -9.24 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.23 Total: -6.73 kcal Atomic # 16 Polarization: -3.44 SS G_CDS: -0.52 Total: -3.96 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -15.04 -12.77 -27.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14783808_12890568.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.743 kcal (2) G-P(sol) polarization free energy of solvation -15.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.773 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.813 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.52 seconds