Wall clock time and date at job start Tue Mar 9 2021 13:06:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 O 1.42103 * 108.57833 * 2 1 4 4 O 1.42089 * 108.57950 * 228.97358 * 2 1 3 5 5 C 1.81396 * 101.92042 * 114.48384 * 2 1 3 6 6 H 1.09002 * 109.47367 * 64.99927 * 5 2 1 7 7 C 1.53005 * 109.47214 * 184.99953 * 5 2 1 8 8 C 1.53004 * 109.47093 * 180.02562 * 7 5 2 9 9 C 1.53002 * 109.47107 * 299.99888 * 8 7 5 10 10 H 1.09001 * 109.46587 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47093 * 300.00175 * 9 8 7 12 12 C 1.34777 * 119.99614 * 204.99616 * 11 9 8 13 13 O 1.21574 * 120.00341 * 0.02562 * 12 11 9 14 14 C 1.47656 * 119.99779 * 180.02562 * 12 11 9 15 15 C 1.40162 * 119.97438 * 359.97438 * 14 12 11 16 16 C 1.36352 * 120.66663 * 179.97438 * 15 14 12 17 17 C 1.39325 * 120.24285 * 0.02562 * 16 15 14 18 18 N 1.37397 * 133.25465 * 180.02562 * 17 16 15 19 19 C 1.36863 * 109.98082 * 179.97438 * 18 17 16 20 20 C 1.34188 * 109.96776 * 359.97438 * 19 18 17 21 21 C 1.50705 * 126.53765 * 179.97438 * 20 19 18 22 22 O 1.42902 * 109.46703 * 105.02940 * 21 20 19 23 23 Si 1.86295 * 109.47405 * 345.02401 * 21 20 19 24 24 C 1.40913 * 119.63964 * 359.97438 * 17 16 15 25 25 C 1.39193 * 119.97026 * 179.73002 * 14 12 11 26 26 C 1.52998 * 109.46851 * 60.00546 * 9 8 7 27 27 C 1.52999 * 109.47308 * 305.00251 * 5 2 1 28 28 H 1.08998 * 109.47228 * 305.51683 * 1 2 3 29 29 H 1.09003 * 109.47194 * 65.51704 * 1 2 3 30 30 H 1.09001 * 109.46647 * 185.51286 * 1 2 3 31 31 H 1.09002 * 109.46924 * 60.00289 * 7 5 2 32 32 H 1.08994 * 109.47050 * 300.00555 * 7 5 2 33 33 H 1.08999 * 109.46676 * 180.02562 * 8 7 5 34 34 H 1.08992 * 109.47072 * 60.00288 * 8 7 5 35 35 H 0.96996 * 120.00499 * 25.00194 * 11 9 8 36 36 H 1.08001 * 119.66833 * 0.02562 * 15 14 12 37 37 H 1.08002 * 119.88239 * 180.02562 * 16 15 14 38 38 H 0.97003 * 125.01120 * 359.95711 * 18 17 16 39 39 H 1.08002 * 125.01637 * 179.97438 * 19 18 17 40 40 H 1.08999 * 109.46702 * 225.02015 * 21 20 19 41 41 H 0.96703 * 113.99826 * 299.99100 * 22 21 20 42 42 H 1.48501 * 110.00051 * 179.97438 * 23 21 20 43 43 H 1.48499 * 110.00139 * 301.32135 * 23 21 20 44 44 H 1.07993 * 120.30724 * 0.02562 * 25 14 12 45 45 H 1.09002 * 109.47400 * 59.99563 * 26 9 8 46 46 H 1.09001 * 109.47056 * 180.02562 * 26 9 8 47 47 H 1.09002 * 109.47121 * 299.99889 * 27 5 2 48 48 H 1.08996 * 109.47182 * 59.99935 * 27 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3470 0.0000 4 8 2.2668 -0.8841 -1.0161 5 6 2.1887 -0.7356 1.6152 6 1 1.8388 -1.7677 1.6345 7 6 3.7001 -0.7050 1.8514 8 6 4.0162 -1.3260 3.2135 9 6 3.3119 -0.5287 4.3133 10 1 3.5368 -0.9715 5.2836 11 7 3.7821 0.8585 4.2881 12 6 3.7226 1.6105 5.4049 13 8 3.2792 1.1375 6.4334 14 6 4.1960 3.0089 5.3794 15 6 4.7076 3.5535 4.1936 16 6 5.1481 4.8433 4.1540 17 6 5.0951 5.6383 5.2969 18 7 5.4553 6.9385 5.5569 19 6 5.1930 7.2438 6.8650 20 6 4.6649 6.1786 7.4872 21 6 4.2385 6.1029 8.9306 22 8 2.8123 6.1447 9.0087 23 14 4.9545 7.5460 9.8663 24 6 4.5830 5.1026 6.4954 25 6 4.1291 3.7868 6.5318 26 6 1.8006 -0.5595 4.0772 27 6 1.4845 0.0621 2.7146 28 1 -0.3633 0.5970 0.8364 29 1 -0.3634 0.4259 -0.9353 30 1 -0.3633 -1.0229 0.0987 31 1 4.0500 0.3272 1.8322 32 1 4.2018 -1.2732 1.0682 33 1 5.0929 -1.3037 3.3819 34 1 3.6664 -2.3581 3.2322 35 1 4.1362 1.2358 3.4676 36 1 4.7526 2.9457 3.3020 37 1 5.5395 5.2502 3.2333 38 1 5.8392 7.5499 4.9089 39 1 5.3829 8.2008 7.3281 40 1 4.5991 5.1716 9.3675 41 1 2.4215 6.9476 8.6376 42 1 4.5407 7.4831 11.2911 43 1 6.4360 7.5317 9.7659 44 1 3.7324 3.3724 7.4467 45 1 1.4508 -1.5916 4.0959 46 1 1.2989 0.0089 4.8604 47 1 1.8344 1.0943 2.6955 48 1 0.4078 0.0403 2.5464 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14783808_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:54 Heat of formation + Delta-G solvation = -74.092618 kcal Electronic energy + Delta-G solvation = -33076.580209 eV Core-core repulsion = 28611.783174 eV Total energy + Delta-G solvation = -4464.797036 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.133 amu Computer time = 3.38 seconds Orbital eigenvalues (eV) -42.47922 -41.26670 -39.33259 -38.02288 -37.85314 -37.34125 -37.06250 -34.94030 -33.25391 -32.35949 -31.79656 -30.66136 -30.44629 -29.94049 -26.46928 -25.15921 -24.02867 -23.95022 -23.46726 -21.86750 -20.81202 -20.41396 -19.84787 -19.32973 -18.59178 -18.13521 -17.57104 -17.33758 -17.12948 -16.95879 -16.68620 -16.41826 -16.13739 -15.90513 -15.57121 -15.30793 -15.29080 -15.03709 -14.87069 -14.74215 -14.68320 -14.30480 -14.15002 -14.03824 -13.93466 -13.77464 -13.75413 -13.44757 -13.41676 -13.11738 -13.02391 -12.71766 -12.52396 -12.43086 -12.27700 -12.16411 -12.09292 -11.97753 -11.86240 -11.61861 -11.01552 -10.80926 -10.77008 -10.31585 -10.05082 -9.30986 -8.81422 -5.07972 -1.10631 -0.03342 0.20878 1.31153 1.48570 1.62053 1.65667 1.98336 2.00585 2.01857 2.19402 2.52562 2.85434 2.98930 3.20216 3.28284 3.56225 3.58512 3.61858 3.70880 3.74089 3.75955 3.81393 3.86287 3.89379 3.96202 4.00372 4.10141 4.17335 4.23221 4.32093 4.38565 4.43997 4.50402 4.52769 4.56945 4.59202 4.70477 4.79083 4.83322 4.87653 4.90451 4.98484 5.04608 5.09797 5.27701 5.39485 5.48892 5.57060 5.61560 5.99818 6.37084 6.56005 6.69680 7.33654 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.658 4.658 2 S 2.416 3.584 3 O -0.935 6.935 4 O -0.939 6.939 5 C -0.571 4.571 6 H 0.142 0.858 7 C -0.108 4.108 8 C -0.119 4.119 9 C 0.144 3.856 10 H 0.096 0.904 11 N -0.725 5.725 12 C 0.566 3.434 13 O -0.537 6.537 14 C -0.170 4.170 15 C -0.067 4.067 16 C -0.133 4.133 17 C 0.119 3.881 18 N -0.585 5.585 19 C 0.061 3.939 20 C -0.192 4.192 21 C -0.034 4.034 22 O -0.540 6.540 23 Si 0.687 3.313 24 C -0.104 4.104 25 C 0.007 3.993 26 C -0.124 4.124 27 C -0.111 4.111 28 H 0.131 0.869 29 H 0.131 0.869 30 H 0.130 0.870 31 H 0.078 0.922 32 H 0.086 0.914 33 H 0.080 0.920 34 H 0.086 0.914 35 H 0.399 0.601 36 H 0.128 0.872 37 H 0.128 0.872 38 H 0.421 0.579 39 H 0.178 0.822 40 H 0.112 0.888 41 H 0.376 0.624 42 H -0.254 1.254 43 H -0.256 1.256 44 H 0.138 0.862 45 H 0.078 0.922 46 H 0.078 0.922 47 H 0.084 0.916 48 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.419 3.733 -2.068 4.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.807 4.807 2 S 2.599 3.401 3 O -0.933 6.933 4 O -0.936 6.936 5 C -0.680 4.680 6 H 0.160 0.840 7 C -0.146 4.146 8 C -0.158 4.158 9 C 0.040 3.960 10 H 0.114 0.886 11 N -0.379 5.379 12 C 0.355 3.645 13 O -0.415 6.415 14 C -0.174 4.174 15 C -0.087 4.087 16 C -0.153 4.153 17 C 0.010 3.990 18 N -0.187 5.187 19 C -0.065 4.065 20 C -0.200 4.200 21 C -0.145 4.145 22 O -0.345 6.345 23 Si 0.589 3.411 24 C -0.108 4.108 25 C -0.012 4.012 26 C -0.163 4.163 27 C -0.149 4.149 28 H 0.150 0.850 29 H 0.149 0.851 30 H 0.148 0.852 31 H 0.096 0.904 32 H 0.105 0.895 33 H 0.099 0.901 34 H 0.105 0.895 35 H 0.236 0.764 36 H 0.146 0.854 37 H 0.146 0.854 38 H 0.259 0.741 39 H 0.195 0.805 40 H 0.130 0.870 41 H 0.223 0.777 42 H -0.179 1.179 43 H -0.181 1.181 44 H 0.156 0.844 45 H 0.097 0.903 46 H 0.097 0.903 47 H 0.103 0.897 48 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 0.502 3.463 -1.134 3.679 hybrid contribution -0.196 -0.443 -0.500 0.696 sum 0.307 3.020 -1.634 3.448 Atomic orbital electron populations 1.30299 1.26578 1.11795 1.12060 1.08097 0.78565 0.75999 0.77457 1.93597 1.79033 1.34247 1.86383 1.93616 1.79142 1.67073 1.53776 1.30254 1.05357 1.12771 1.19596 0.83993 1.21360 0.90513 1.02946 0.99819 1.21774 1.01422 1.00026 0.92585 1.20961 0.93390 0.81501 1.00187 0.88617 1.46051 1.65546 1.13199 1.13081 1.18181 0.77682 0.85498 0.83165 1.90791 1.46015 1.73343 1.31344 1.19549 1.08493 0.94304 0.95101 1.20606 0.96670 0.94615 0.96770 1.19681 1.05658 0.93791 0.96195 1.18436 0.99677 0.85097 0.95754 1.41739 1.55281 1.10898 1.10820 1.21677 1.01624 0.99505 0.83709 1.20751 1.09459 0.93312 0.96461 1.24406 0.85788 1.09721 0.94619 1.86536 1.17801 1.46087 1.84038 0.95321 0.80332 0.84311 0.81177 1.18925 1.04776 0.94259 0.92859 1.20686 0.92243 0.90631 0.97661 1.21874 0.96128 1.02033 0.96274 1.21497 0.99829 0.99652 0.93941 0.85038 0.85082 0.85172 0.90391 0.89508 0.90137 0.89506 0.76422 0.85416 0.85364 0.74096 0.80471 0.87040 0.77656 1.17866 1.18097 0.84443 0.90320 0.90289 0.89738 0.90226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 2.66 10.01 101.05 1.01 3.67 16 2 S 2.42 -3.39 4.90 -107.50 -0.53 -3.91 16 3 O -0.94 -1.80 18.06 -57.83 -1.04 -2.84 16 4 O -0.94 -2.50 18.10 -57.83 -1.05 -3.54 16 5 C -0.57 1.99 2.62 -26.73 -0.07 1.92 16 6 H 0.14 -0.80 8.14 -51.92 -0.42 -1.23 16 7 C -0.11 0.31 5.03 -26.73 -0.13 0.17 16 8 C -0.12 0.35 5.61 -26.73 -0.15 0.20 16 9 C 0.14 -0.15 2.78 -67.93 -0.19 -0.33 16 10 H 0.10 0.06 7.58 -51.93 -0.39 -0.33 16 11 N -0.72 0.14 4.18 -54.81 -0.23 -0.09 16 12 C 0.57 1.73 7.73 -12.41 -0.10 1.63 16 13 O -0.54 -3.54 15.99 5.30 0.08 -3.46 16 14 C -0.17 -0.42 5.87 -104.98 -0.62 -1.03 16 15 C -0.07 -0.02 9.46 -39.54 -0.37 -0.39 16 16 C -0.13 0.01 10.00 -39.86 -0.40 -0.38 16 17 C 0.12 0.09 7.27 -83.96 -0.61 -0.52 16 18 N -0.59 1.10 6.05 -10.61 -0.06 1.04 16 19 C 0.06 -0.12 10.43 -16.73 -0.17 -0.30 16 20 C -0.19 -0.11 5.58 -102.69 -0.57 -0.68 16 21 C -0.03 -0.01 3.06 36.01 0.11 0.10 16 22 O -0.54 -0.60 12.88 -35.23 -0.45 -1.06 16 23 Si 0.69 -1.04 30.76 -169.99 -5.23 -6.27 16 24 C -0.10 -0.26 6.34 -105.16 -0.67 -0.92 16 25 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 26 C -0.12 0.21 5.60 -26.70 -0.15 0.06 16 27 C -0.11 0.34 4.75 -26.70 -0.13 0.21 16 28 H 0.13 -0.72 6.77 -51.92 -0.35 -1.07 16 29 H 0.13 -0.53 8.14 -51.92 -0.42 -0.95 16 30 H 0.13 -0.75 8.14 -51.92 -0.42 -1.17 16 31 H 0.08 -0.25 6.51 -51.93 -0.34 -0.58 16 32 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 33 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 34 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.40 -0.82 4.87 -40.82 -0.20 -1.02 16 36 H 0.13 -0.29 6.36 -52.49 -0.33 -0.63 16 37 H 0.13 -0.31 8.06 -52.49 -0.42 -0.73 16 38 H 0.42 -2.06 8.96 -40.82 -0.37 -2.43 16 39 H 0.18 -1.01 6.35 -52.49 -0.33 -1.34 16 40 H 0.11 0.17 7.96 -51.93 -0.41 -0.24 16 41 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 42 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 43 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 44 H 0.14 0.63 7.64 -52.49 -0.40 0.23 16 45 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 46 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 47 H 0.08 -0.20 7.61 -51.93 -0.39 -0.59 16 48 H 0.08 -0.40 6.39 -51.93 -0.33 -0.73 16 LS Contribution 395.82 15.07 5.96 5.96 Total: 0.00 -15.23 395.82 -12.59 -27.81 By element: Atomic # 1 Polarization: -10.25 SS G_CDS: -6.46 Total: -16.71 kcal Atomic # 6 Polarization: 6.65 SS G_CDS: -3.58 Total: 3.07 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -0.29 Total: 0.95 kcal Atomic # 8 Polarization: -8.44 SS G_CDS: -2.46 Total: -10.90 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.23 Total: -6.27 kcal Atomic # 16 Polarization: -3.39 SS G_CDS: -0.53 Total: -3.91 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -15.23 -12.59 -27.81 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14783808_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.279 kcal (2) G-P(sol) polarization free energy of solvation -15.226 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.505 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.38 seconds