Wall clock time and date at job start Tue Mar 9 2021 13:09:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37648 * 125.67261 * 2 1 4 4 C 1.46663 * 126.22535 * 359.97438 * 3 2 1 5 5 O 1.21702 * 120.00406 * 3.94272 * 4 3 2 6 6 N 1.34776 * 119.99997 * 183.93983 * 4 3 2 7 7 C 1.46500 * 120.00338 * 174.54307 * 6 4 3 8 8 H 1.09005 * 109.47081 * 325.00443 * 7 6 4 9 9 C 1.52996 * 109.47080 * 85.00036 * 7 6 4 10 10 C 1.53000 * 109.47227 * 60.00541 * 9 7 6 11 11 C 1.52995 * 109.47290 * 59.99636 * 10 9 7 12 12 H 1.09001 * 109.46963 * 60.00031 * 11 10 9 13 13 S 1.81398 * 109.47373 * 180.02562 * 11 10 9 14 14 C 1.81404 * 101.92020 * 304.99924 * 13 11 10 15 15 O 1.42094 * 108.58064 * 59.48452 * 13 11 10 16 16 O 1.42099 * 108.57803 * 190.51591 * 13 11 10 17 17 C 1.53004 * 109.47218 * 300.00566 * 11 10 9 18 18 C 1.52998 * 109.47613 * 205.00597 * 7 6 4 19 19 C 1.37882 * 107.54540 * 179.71974 * 3 2 1 20 20 C 1.39879 * 107.09764 * 0.24249 * 19 3 2 21 21 Br 1.89095 * 126.07747 * 179.97438 * 20 19 3 22 22 C 1.35506 * 107.85000 * 0.02562 * 20 19 3 23 23 C 1.50702 * 125.56991 * 180.02562 * 22 20 19 24 24 O 1.42897 * 109.47250 * 122.59307 * 23 22 20 25 25 Si 1.86302 * 109.46708 * 242.58641 * 23 22 20 26 26 H 1.09001 * 109.47243 * 84.40324 * 1 2 3 27 27 H 1.09008 * 109.47102 * 204.40097 * 1 2 3 28 28 H 1.08998 * 109.47527 * 324.40226 * 1 2 3 29 29 H 0.96998 * 119.99837 * 354.54813 * 6 4 3 30 30 H 1.08999 * 109.47341 * 180.02562 * 9 7 6 31 31 H 1.09006 * 109.47473 * 300.00059 * 9 7 6 32 32 H 1.08995 * 109.47398 * 180.02562 * 10 9 7 33 33 H 1.08999 * 109.46657 * 300.00048 * 10 9 7 34 34 H 1.09003 * 109.46681 * 59.99849 * 14 13 11 35 35 H 1.09002 * 109.47276 * 179.97438 * 14 13 11 36 36 H 1.09003 * 109.47145 * 300.00301 * 14 13 11 37 37 H 1.09001 * 109.46716 * 299.99615 * 17 11 10 38 38 H 1.08997 * 109.47085 * 179.97438 * 17 11 10 39 39 H 1.08999 * 109.47344 * 180.02562 * 18 7 6 40 40 H 1.09000 * 109.47437 * 59.99541 * 18 7 6 41 41 H 1.08002 * 126.45194 * 180.23813 * 19 3 2 42 42 H 1.08995 * 109.47336 * 2.58618 * 23 22 20 43 43 H 0.96702 * 114.00154 * 179.97438 * 24 23 22 44 44 H 1.48501 * 110.00255 * 292.63310 * 25 23 22 45 45 H 1.48505 * 110.00020 * 53.95185 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8120 2.5122 -0.0005 5 8 0.6235 2.7640 0.0714 6 7 2.7094 3.5145 -0.0807 7 6 2.2507 4.9006 -0.2018 8 1 1.3410 4.9312 -0.8014 9 6 1.9630 5.4661 1.1905 10 6 3.2399 5.4232 2.0322 11 6 4.3255 6.2624 1.3553 12 1 3.9841 7.2936 1.2651 13 16 5.8396 6.2110 2.3529 14 6 5.2409 6.7693 3.9717 15 8 6.2605 4.8587 2.4677 16 8 6.7479 7.1799 1.8474 17 6 4.6131 5.6969 -0.0370 18 6 3.3362 5.7398 -0.8788 19 6 3.5780 0.6892 0.0064 20 6 3.5529 -0.7093 0.0047 21 35 5.0610 -1.8502 0.0106 22 6 2.2559 -1.1015 -0.0032 23 6 1.7715 -2.5285 -0.0071 24 8 0.9245 -2.7472 1.1228 25 14 0.8153 -2.8554 -1.5723 26 1 -0.3634 0.1002 -1.0228 27 1 -0.3634 -0.9359 0.4246 28 1 -0.3634 0.8356 0.5982 29 1 3.6591 3.3182 -0.0582 30 1 1.6213 6.4972 1.1004 31 1 1.1896 4.8682 1.6728 32 1 3.0349 5.8256 3.0242 33 1 3.5812 4.3920 2.1223 34 1 4.4698 6.0866 4.3290 35 1 6.0692 6.7841 4.6801 36 1 4.8237 7.7720 3.8787 37 1 4.9545 4.6657 0.0531 38 1 5.3862 6.2950 -0.5195 39 1 2.9951 6.7712 -0.9685 40 1 3.5412 5.3370 -1.8707 41 1 4.4582 1.3152 0.0118 42 1 2.6265 -3.2026 0.0438 43 1 0.5750 -3.6467 1.1843 44 1 -0.4459 -2.0714 -1.5701 45 1 1.6370 -2.4922 -2.7547 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14783808_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:46 Heat of formation + Delta-G solvation = -78.409910 kcal Electronic energy + Delta-G solvation = -31434.234001 eV Core-core repulsion = 27014.110172 eV Total energy + Delta-G solvation = -4420.123829 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.044 amu Computer time = 2.54 seconds Orbital eigenvalues (eV) -42.85035 -41.14689 -39.11736 -38.02405 -37.82639 -37.06795 -35.31149 -34.31462 -32.60222 -32.38668 -31.29619 -30.76582 -30.34575 -27.37286 -26.96519 -24.35679 -24.08460 -23.31221 -21.87164 -20.52639 -20.41048 -19.86075 -19.02139 -18.62081 -18.17872 -17.31894 -17.22143 -17.10241 -17.02513 -16.53457 -16.35460 -16.03440 -15.57725 -15.39773 -15.13112 -14.91460 -14.65649 -14.39629 -14.32361 -14.31607 -14.18042 -14.13512 -13.99240 -13.77726 -13.66932 -13.49061 -13.24198 -13.12447 -13.02737 -12.85225 -12.74360 -12.50594 -12.11672 -12.06290 -12.03362 -11.84457 -11.70877 -11.27563 -11.07671 -10.99625 -10.69500 -10.26593 -9.76870 -9.26048 -5.19599 -1.12030 0.16334 0.67477 0.92940 1.25227 1.44589 1.51962 1.60847 1.82858 2.19228 2.23112 2.51407 2.83166 3.03125 3.15239 3.23827 3.46475 3.53518 3.59340 3.66690 3.71893 3.77246 3.81267 3.90159 3.93757 4.00621 4.10643 4.15786 4.18637 4.24915 4.29312 4.43230 4.43783 4.54056 4.60312 4.65899 4.67557 4.75999 4.76945 4.81578 4.89853 4.99581 5.23805 5.35389 5.61676 5.82874 6.31257 6.38138 7.02903 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.387 5.387 3 C -0.035 4.035 4 C 0.594 3.406 5 O -0.539 6.539 6 N -0.713 5.713 7 C 0.148 3.852 8 H 0.096 0.904 9 C -0.124 4.124 10 C -0.112 4.112 11 C -0.572 4.572 12 H 0.142 0.858 13 S 2.416 3.584 14 C -0.658 4.658 15 O -0.933 6.933 16 O -0.938 6.938 17 C -0.109 4.109 18 C -0.119 4.119 19 C -0.109 4.109 20 C -0.158 4.158 21 Br -0.015 7.015 22 C 0.092 3.908 23 C -0.053 4.053 24 O -0.545 6.545 25 Si 0.684 3.316 26 H 0.077 0.923 27 H 0.100 0.900 28 H 0.108 0.892 29 H 0.404 0.596 30 H 0.080 0.920 31 H 0.079 0.921 32 H 0.080 0.920 33 H 0.084 0.916 34 H 0.131 0.869 35 H 0.131 0.869 36 H 0.129 0.871 37 H 0.079 0.921 38 H 0.088 0.912 39 H 0.088 0.912 40 H 0.081 0.919 41 H 0.159 0.841 42 H 0.098 0.902 43 H 0.389 0.611 44 H -0.245 1.245 45 H -0.250 1.250 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.424 -1.073 -0.072 3.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.060 5.060 3 C -0.150 4.150 4 C 0.382 3.618 5 O -0.418 6.418 6 N -0.366 5.366 7 C 0.044 3.956 8 H 0.114 0.886 9 C -0.163 4.163 10 C -0.150 4.150 11 C -0.681 4.681 12 H 0.160 0.840 13 S 2.599 3.401 14 C -0.807 4.807 15 O -0.930 6.930 16 O -0.935 6.935 17 C -0.147 4.147 18 C -0.158 4.158 19 C -0.137 4.137 20 C -0.244 4.244 21 Br 0.069 6.931 22 C -0.029 4.029 23 C -0.163 4.163 24 O -0.352 6.352 25 Si 0.583 3.417 26 H 0.095 0.905 27 H 0.119 0.881 28 H 0.126 0.874 29 H 0.241 0.759 30 H 0.098 0.902 31 H 0.097 0.903 32 H 0.099 0.901 33 H 0.102 0.898 34 H 0.149 0.851 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.097 0.903 38 H 0.107 0.893 39 H 0.107 0.893 40 H 0.100 0.900 41 H 0.176 0.824 42 H 0.116 0.884 43 H 0.238 0.762 44 H -0.170 1.170 45 H -0.174 1.174 Dipole moment (debyes) X Y Z Total from point charges -3.460 -0.515 -0.892 3.610 hybrid contribution -0.263 0.831 0.712 1.126 sum -3.724 0.317 -0.180 3.742 Atomic orbital electron populations 1.22579 0.74918 1.06419 1.04294 1.43765 1.07242 1.03928 1.51056 1.20051 0.89767 0.87908 1.17304 1.16805 0.85688 0.83142 0.76171 1.90822 1.16024 1.84694 1.50249 1.45797 1.09916 1.06001 1.74919 1.21018 0.98275 0.79473 0.96871 0.88604 1.21863 0.96959 1.02250 0.95235 1.21486 0.94491 1.00243 0.98770 1.30262 1.18655 1.09245 1.09901 0.83966 1.08096 0.77656 0.75803 0.78519 1.30304 1.13887 1.13056 1.23493 1.93609 1.79350 1.34318 1.85762 1.93620 1.58929 1.62628 1.78332 1.21369 0.99640 1.02055 0.91680 1.21782 0.93818 1.01326 0.98885 1.21260 0.95259 0.93036 1.04102 1.20766 0.91071 0.94480 1.18060 1.96675 1.35472 1.62786 1.98148 1.19551 0.89012 0.87882 1.06445 1.24345 0.99896 0.91557 1.00495 1.86454 1.66550 1.36342 1.45825 0.95645 0.80128 0.90789 0.75166 0.90477 0.88120 0.87382 0.75940 0.90167 0.90251 0.90136 0.89752 0.85088 0.85049 0.85199 0.90288 0.89343 0.89299 0.90017 0.82382 0.88446 0.76192 1.16955 1.17379 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 45. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.11 8.57 59.85 0.51 0.62 16 2 N -0.39 -1.21 3.12 -115.59 -0.36 -1.57 16 3 C -0.04 -0.10 6.89 -81.98 -0.56 -0.66 16 4 C 0.59 1.37 7.73 -12.86 -0.10 1.27 16 5 O -0.54 -2.55 14.43 5.19 0.07 -2.47 16 6 N -0.71 0.52 4.22 -55.12 -0.23 0.29 16 7 C 0.15 -0.27 2.74 -67.93 -0.19 -0.46 16 8 H 0.10 -0.06 7.66 -51.93 -0.40 -0.45 16 9 C -0.12 0.30 5.60 -26.73 -0.15 0.15 16 10 C -0.11 0.38 4.75 -26.73 -0.13 0.25 16 11 C -0.57 2.13 2.62 -26.73 -0.07 2.06 16 12 H 0.14 -0.85 8.14 -51.92 -0.42 -1.28 16 13 S 2.42 -3.34 4.90 -107.50 -0.53 -3.86 16 14 C -0.66 2.64 10.01 101.05 1.01 3.65 16 15 O -0.93 -2.04 18.06 -57.83 -1.04 -3.09 16 16 O -0.94 -2.50 18.10 -57.83 -1.05 -3.55 16 17 C -0.11 0.34 5.03 -26.73 -0.13 0.20 16 18 C -0.12 0.42 5.61 -26.73 -0.15 0.27 16 19 C -0.11 -0.22 10.34 -39.10 -0.40 -0.62 16 20 C -0.16 -0.45 6.53 -39.94 -0.26 -0.72 16 21 Br -0.02 -0.03 33.05 -68.01 -2.25 -2.28 16 22 C 0.09 0.25 5.17 -81.90 -0.42 -0.17 16 23 C -0.05 0.01 2.78 36.01 0.10 0.11 16 24 O -0.54 0.42 11.45 -35.23 -0.40 0.02 16 25 Si 0.68 -0.86 31.18 -169.99 -5.30 -6.16 16 26 H 0.08 0.13 7.76 -51.93 -0.40 -0.27 16 27 H 0.10 0.09 5.74 -51.92 -0.30 -0.21 16 28 H 0.11 0.27 6.56 -51.93 -0.34 -0.07 16 29 H 0.40 -0.89 5.76 -40.82 -0.24 -1.12 16 30 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 31 H 0.08 -0.04 8.08 -51.93 -0.42 -0.46 16 32 H 0.08 -0.43 6.39 -51.93 -0.33 -0.76 16 33 H 0.08 -0.21 7.60 -51.93 -0.39 -0.60 16 34 H 0.13 -0.71 6.77 -51.92 -0.35 -1.07 16 35 H 0.13 -0.51 8.14 -51.92 -0.42 -0.93 16 36 H 0.13 -0.75 8.14 -51.92 -0.42 -1.18 16 37 H 0.08 -0.25 6.51 -51.93 -0.34 -0.59 16 38 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 39 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 40 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 41 H 0.16 -0.07 7.45 -52.49 -0.39 -0.47 16 42 H 0.10 -0.11 6.94 -51.93 -0.36 -0.47 16 43 H 0.39 -2.29 8.74 45.56 0.40 -1.89 16 44 H -0.25 -0.15 6.14 56.52 0.35 0.20 16 45 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 LS Contribution 385.08 15.07 5.80 5.80 Total: 0.00 -13.32 385.08 -12.30 -25.62 By element: Atomic # 1 Polarization: -8.65 SS G_CDS: -6.07 Total: -14.73 kcal Atomic # 6 Polarization: 6.91 SS G_CDS: -0.94 Total: 5.96 kcal Atomic # 7 Polarization: -0.69 SS G_CDS: -0.59 Total: -1.28 kcal Atomic # 8 Polarization: -6.66 SS G_CDS: -2.42 Total: -9.08 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.30 Total: -6.16 kcal Atomic # 16 Polarization: -3.34 SS G_CDS: -0.53 Total: -3.86 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.28 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -13.32 -12.30 -25.62 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14783808_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.785 kcal (2) G-P(sol) polarization free energy of solvation -13.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.54 seconds