Wall clock time and date at job start Tue Mar 9 2021 13:10:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33811 * 122.44999 * 2 1 4 4 C 1.50708 * 124.52343 * 0.02562 * 3 2 1 5 5 O 1.42898 * 109.47029 * 113.28128 * 4 3 2 6 6 Si 1.86300 * 109.47166 * 233.28125 * 4 3 2 7 7 S 1.70614 * 110.95442 * 180.28442 * 3 2 1 8 8 C 1.75832 * 91.56219 * 359.66109 * 7 3 2 9 9 C 1.46578 * 125.45585 * 180.02562 * 8 7 3 10 10 O 1.21704 * 120.00026 * 180.33431 * 9 8 7 11 11 N 1.34777 * 120.00443 * 0.32809 * 9 8 7 12 12 C 1.46502 * 120.00543 * 180.02562 * 11 9 8 13 13 H 1.09003 * 109.46627 * 325.00310 * 12 11 9 14 14 C 1.52994 * 109.46775 * 85.00044 * 12 11 9 15 15 C 1.52999 * 109.47243 * 60.00421 * 14 12 11 16 16 C 1.53001 * 109.47180 * 59.99894 * 15 14 12 17 17 H 1.09001 * 109.47484 * 59.99465 * 16 15 14 18 18 S 1.81400 * 109.47154 * 180.02562 * 16 15 14 19 19 C 1.81402 * 101.92065 * 304.99568 * 18 16 15 20 20 O 1.42100 * 108.57922 * 59.48408 * 18 16 15 21 21 O 1.42097 * 108.57705 * 190.51206 * 18 16 15 22 22 C 1.53006 * 109.46948 * 299.99950 * 16 15 14 23 23 C 1.52994 * 109.47383 * 205.00338 * 12 11 9 24 24 C 1.36644 * 109.08229 * 0.33321 * 8 7 3 25 25 H 1.09001 * 109.46824 * 84.85489 * 1 2 3 26 26 H 1.09003 * 109.47225 * 204.85083 * 1 2 3 27 27 H 1.09003 * 109.47275 * 324.85228 * 1 2 3 28 28 H 1.09001 * 109.46867 * 353.28211 * 4 3 2 29 29 H 0.96702 * 114.00061 * 59.99850 * 5 4 3 30 30 H 1.48497 * 109.99813 * 58.68065 * 6 4 3 31 31 H 1.48496 * 109.99745 * 180.02562 * 6 4 3 32 32 H 0.97001 * 119.99614 * 0.02562 * 11 9 8 33 33 H 1.09006 * 109.47225 * 180.02562 * 14 12 11 34 34 H 1.09004 * 109.47679 * 299.99933 * 14 12 11 35 35 H 1.08995 * 109.47086 * 299.99605 * 15 14 12 36 36 H 1.09007 * 109.47146 * 179.97438 * 15 14 12 37 37 H 1.08998 * 109.46808 * 60.00349 * 19 18 16 38 38 H 1.08998 * 109.46983 * 179.97438 * 19 18 16 39 39 H 1.08997 * 109.47187 * 300.00417 * 19 18 16 40 40 H 1.08995 * 109.47032 * 300.00114 * 22 16 15 41 41 H 1.08997 * 109.47234 * 180.02562 * 22 16 15 42 42 H 1.09003 * 109.47498 * 59.99747 * 23 12 11 43 43 H 1.08995 * 109.47206 * 179.97438 * 23 12 11 44 44 H 1.07998 * 123.34869 * 179.71258 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5162 0.0006 5 8 1.9397 3.1625 1.2382 6 14 2.3585 3.4988 -1.4074 7 16 3.8969 0.7892 -0.0079 8 6 3.5936 -0.9428 -0.0009 9 6 4.6230 -1.9863 -0.0026 10 8 4.3001 -3.1597 -0.0034 11 7 5.9272 -1.6464 -0.0034 12 6 6.9561 -2.6893 -0.0057 13 1 6.6125 -3.5399 0.5830 14 6 7.2234 -3.1388 -1.4435 15 6 7.7056 -1.9448 -2.2698 16 6 8.9951 -1.3906 -1.6607 17 1 9.7606 -2.1666 -1.6624 18 16 9.5665 0.0255 -2.6400 19 6 9.6688 -0.6872 -4.3050 20 8 8.5507 1.0192 -2.6345 21 8 10.8774 0.3709 -2.2142 22 6 8.7278 -0.9410 -0.2229 23 6 8.2455 -2.1350 0.6034 24 6 2.2446 -1.1601 -0.0004 25 1 -0.3633 0.0922 -1.0236 26 1 -0.3634 -0.9325 0.4319 27 1 -0.3634 0.8403 0.5916 28 1 0.5540 2.4513 -0.1193 29 1 2.8866 3.2548 1.4113 30 1 2.0764 2.8203 -2.6978 31 1 1.7857 4.8688 -1.4174 32 1 6.1847 -0.7111 -0.0025 33 1 7.9886 -3.9151 -1.4452 34 1 6.3048 -3.5337 -1.8775 35 1 6.9402 -1.1689 -2.2681 36 1 7.8965 -2.2652 -3.2941 37 1 8.6853 -1.0472 -4.6071 38 1 10.0074 0.0753 -5.0064 39 1 10.3745 -1.5179 -4.3020 40 1 7.9624 -0.1651 -0.2212 41 1 9.6463 -0.5457 0.2109 42 1 8.0551 -1.8147 1.6278 43 1 9.0108 -2.9111 0.6021 44 1 1.8019 -2.1452 -0.0011 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14783808_6739946.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:16 Heat of formation + Delta-G solvation = -108.777383 kcal Electronic energy + Delta-G solvation = -28752.957590 eV Core-core repulsion = 24697.686948 eV Total energy + Delta-G solvation = -4055.270642 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.094 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -41.42167 -40.03620 -39.07285 -38.04328 -37.57759 -37.08781 -35.04692 -32.71247 -32.41265 -31.23261 -30.39203 -29.90679 -26.81813 -24.69672 -24.09750 -23.98190 -22.15971 -20.64803 -20.16651 -19.89414 -19.54152 -18.19534 -17.79173 -17.72326 -17.16891 -17.03529 -16.81675 -16.49806 -16.12379 -15.88735 -15.69938 -15.35602 -15.08812 -14.96650 -14.79067 -14.38411 -14.33853 -14.19608 -14.17232 -14.00484 -13.74704 -13.49518 -13.47063 -13.18728 -13.14419 -13.05866 -13.04401 -12.74221 -12.50653 -12.44134 -12.19921 -12.13020 -12.04519 -11.95841 -11.69919 -11.11708 -11.07979 -10.79975 -10.24575 -9.70592 -9.48845 -5.19960 -1.13991 -0.65264 0.29211 0.69509 1.05153 1.26994 1.57311 1.58642 1.86112 1.98070 2.15279 2.49215 2.81497 3.14362 3.22931 3.25711 3.49379 3.51728 3.62468 3.70308 3.71234 3.81242 3.89827 3.93127 4.06171 4.10602 4.13080 4.16743 4.25057 4.36917 4.42229 4.43767 4.52883 4.61394 4.65315 4.72888 4.76705 4.80269 4.83268 4.89250 4.92591 5.00466 5.22666 5.33705 5.34046 6.31152 6.33831 7.06562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.098 4.098 3 C -0.231 4.231 4 C -0.033 4.033 5 O -0.532 6.532 6 Si 0.675 3.325 7 S 0.205 5.795 8 C -0.263 4.263 9 C 0.595 3.405 10 O -0.524 6.524 11 N -0.723 5.723 12 C 0.145 3.855 13 H 0.098 0.902 14 C -0.124 4.124 15 C -0.112 4.112 16 C -0.572 4.572 17 H 0.143 0.857 18 S 2.415 3.585 19 C -0.658 4.658 20 O -0.933 6.933 21 O -0.938 6.938 22 C -0.109 4.109 23 C -0.120 4.120 24 C -0.044 4.044 25 H 0.073 0.927 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.128 0.872 29 H 0.378 0.622 30 H -0.247 1.247 31 H -0.239 1.239 32 H 0.398 0.602 33 H 0.081 0.919 34 H 0.078 0.922 35 H 0.083 0.917 36 H 0.081 0.919 37 H 0.131 0.869 38 H 0.131 0.869 39 H 0.129 0.871 40 H 0.078 0.922 41 H 0.088 0.912 42 H 0.081 0.919 43 H 0.089 0.911 44 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.536 -1.004 -1.364 3.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.111 4.111 3 C -0.350 4.350 4 C -0.146 4.146 5 O -0.338 6.338 6 Si 0.574 3.426 7 S 0.474 5.526 8 C -0.383 4.383 9 C 0.381 3.619 10 O -0.402 6.402 11 N -0.376 5.376 12 C 0.040 3.960 13 H 0.116 0.884 14 C -0.164 4.164 15 C -0.150 4.150 16 C -0.681 4.681 17 H 0.161 0.839 18 S 2.598 3.402 19 C -0.808 4.808 20 O -0.930 6.930 21 O -0.935 6.935 22 C -0.148 4.148 23 C -0.159 4.159 24 C -0.078 4.078 25 H 0.091 0.909 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.145 0.855 29 H 0.225 0.775 30 H -0.171 1.171 31 H -0.163 1.163 32 H 0.234 0.766 33 H 0.099 0.901 34 H 0.097 0.903 35 H 0.102 0.898 36 H 0.099 0.901 37 H 0.149 0.851 38 H 0.150 0.850 39 H 0.148 0.852 40 H 0.096 0.904 41 H 0.107 0.893 42 H 0.100 0.900 43 H 0.107 0.893 44 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 3.060 0.404 -1.825 3.586 hybrid contribution -1.722 -1.697 -0.169 2.423 sum 1.339 -1.293 -1.994 2.728 Atomic orbital electron populations 1.20621 0.89176 1.03583 1.02670 1.18688 0.98115 0.90923 1.03401 1.24472 0.98915 1.00809 1.10840 1.24637 1.03775 0.89828 0.96345 1.86570 1.29752 1.79453 1.37984 0.95020 0.90257 0.80327 0.76992 1.82774 1.02755 0.98593 1.68452 1.24510 0.97994 0.96787 1.18992 1.16914 0.81601 0.87379 0.76008 1.90858 1.81601 1.18084 1.49639 1.46027 1.05261 1.10362 1.75981 1.21021 0.86968 0.91062 0.96901 0.88368 1.21869 1.02484 0.97136 0.94866 1.21496 0.94191 0.99954 0.99386 1.30269 1.08557 1.19650 1.09627 0.83914 1.08126 0.75632 0.77790 0.78647 1.30304 1.11791 1.14523 1.24145 1.93601 1.59548 1.53936 1.85945 1.93622 1.37956 1.81502 1.80382 1.21372 1.03232 0.99161 0.90994 1.21782 0.96593 0.98123 0.99368 1.20684 0.90926 0.99993 0.96152 0.90861 0.90780 0.90933 0.85509 0.77473 1.17113 1.16288 0.76575 0.90089 0.90298 0.89804 0.90096 0.85066 0.85049 0.85183 0.90370 0.89299 0.90000 0.89294 0.82646 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.07 9.48 36.01 0.34 0.41 16 2 C -0.10 -0.07 5.78 -106.45 -0.62 -0.69 16 3 C -0.23 -0.01 4.83 -35.86 -0.17 -0.19 16 4 C -0.03 0.01 2.77 36.01 0.10 0.11 16 5 O -0.53 0.03 12.88 -35.23 -0.45 -0.42 16 6 Si 0.68 -0.57 32.12 -169.99 -5.46 -6.03 16 7 S 0.21 -0.25 20.81 -107.50 -2.24 -2.49 16 8 C -0.26 -0.30 6.45 -36.80 -0.24 -0.54 16 9 C 0.59 1.12 7.75 -12.90 -0.10 1.02 16 10 O -0.52 -2.73 16.50 5.18 0.09 -2.64 16 11 N -0.72 0.75 4.23 -55.15 -0.23 0.52 16 12 C 0.14 -0.29 2.78 -67.94 -0.19 -0.48 16 13 H 0.10 -0.06 7.58 -51.93 -0.39 -0.45 16 14 C -0.12 0.34 5.60 -26.73 -0.15 0.19 16 15 C -0.11 0.44 4.75 -26.73 -0.13 0.31 16 16 C -0.57 2.43 2.62 -26.73 -0.07 2.36 16 17 H 0.14 -0.92 8.14 -51.92 -0.42 -1.35 16 18 S 2.42 -5.02 4.90 -107.50 -0.53 -5.54 16 19 C -0.66 3.06 10.01 101.05 1.01 4.07 16 20 O -0.93 -1.00 18.06 -57.83 -1.04 -2.04 16 21 O -0.94 -1.88 18.10 -57.83 -1.05 -2.92 16 22 C -0.11 0.40 5.03 -26.73 -0.13 0.26 16 23 C -0.12 0.46 5.61 -26.73 -0.15 0.31 16 24 C -0.04 -0.06 9.78 -40.44 -0.40 -0.46 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.07 -0.09 8.10 -51.93 -0.42 -0.51 16 27 H 0.07 -0.06 7.00 -51.93 -0.36 -0.42 16 28 H 0.13 -0.07 6.25 -51.93 -0.32 -0.39 16 29 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 30 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 31 H -0.24 -0.40 7.11 56.52 0.40 0.00 16 32 H 0.40 -1.03 5.98 -40.82 -0.24 -1.28 16 33 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 34 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.08 -0.27 7.60 -51.93 -0.39 -0.67 16 36 H 0.08 -0.48 6.39 -51.92 -0.33 -0.81 16 37 H 0.13 -0.81 6.78 -51.92 -0.35 -1.16 16 38 H 0.13 -0.60 8.14 -51.92 -0.42 -1.02 16 39 H 0.13 -0.82 8.14 -51.93 -0.42 -1.25 16 40 H 0.08 -0.30 6.51 -51.93 -0.34 -0.64 16 41 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 42 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 43 H 0.09 -0.42 8.14 -51.93 -0.42 -0.85 16 44 H 0.16 0.18 8.06 -52.49 -0.42 -0.24 16 LS Contribution 377.27 15.07 5.69 5.69 Total: 0.00 -12.22 377.27 -12.31 -24.53 By element: Atomic # 1 Polarization: -9.15 SS G_CDS: -6.19 Total: -15.34 kcal Atomic # 6 Polarization: 7.59 SS G_CDS: -0.89 Total: 6.70 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -0.23 Total: 0.52 kcal Atomic # 8 Polarization: -5.58 SS G_CDS: -2.46 Total: -8.03 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.46 Total: -6.03 kcal Atomic # 16 Polarization: -5.27 SS G_CDS: -2.76 Total: -8.03 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -12.22 -12.31 -24.53 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14783808_6739946.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.243 kcal (2) G-P(sol) polarization free energy of solvation -12.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.310 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.534 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds