Wall clock time and date at job start Tue Mar 9 2021 13:10:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 O 1.42099 * 108.58173 * 2 1 4 4 O 1.42106 * 108.57931 * 228.97592 * 2 1 3 5 5 C 1.81399 * 101.92301 * 114.48856 * 2 1 3 6 6 H 1.09000 * 109.47234 * 65.00086 * 5 2 1 7 7 C 1.53006 * 109.47004 * 184.99994 * 5 2 1 8 8 C 1.52999 * 109.46626 * 179.97438 * 7 5 2 9 9 C 1.52997 * 109.47592 * 300.00035 * 8 7 5 10 10 H 1.09001 * 109.47375 * 180.02562 * 9 8 7 11 11 N 1.46499 * 109.47012 * 300.00038 * 9 8 7 12 12 C 1.34778 * 120.00288 * 274.99862 * 11 9 8 13 13 O 1.21285 * 119.99803 * 0.02562 * 12 11 9 14 14 C 1.50703 * 120.00048 * 180.02562 * 12 11 9 15 15 N 1.46493 * 109.47097 * 179.97438 * 14 12 11 16 16 C 1.36833 * 125.06273 * 265.02817 * 15 14 12 17 17 C 1.34244 * 109.93882 * 179.97438 * 16 15 14 18 18 C 1.50698 * 126.50195 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47362 * 254.97495 * 18 17 16 20 20 Si 1.86302 * 109.46987 * 14.97549 * 18 17 16 21 21 C 1.46487 * 106.99643 * 359.97438 * 17 16 15 22 22 C 1.39593 * 134.03793 * 180.02562 * 21 17 16 23 23 C 1.36659 * 119.76527 * 179.97438 * 22 21 17 24 24 C 1.38785 * 120.53342 * 0.02562 * 23 22 21 25 25 C 1.37795 * 120.66486 * 359.97438 * 24 23 22 26 26 C 1.37692 * 125.06472 * 84.71886 * 15 14 12 27 27 C 1.52996 * 109.47165 * 60.00300 * 9 8 7 28 28 C 1.52997 * 109.47139 * 304.99984 * 5 2 1 29 29 H 1.08996 * 109.47092 * 305.51051 * 1 2 3 30 30 H 1.09004 * 109.46897 * 65.51540 * 1 2 3 31 31 H 1.08993 * 109.46941 * 185.51045 * 1 2 3 32 32 H 1.08993 * 109.46955 * 300.00150 * 7 5 2 33 33 H 1.09000 * 109.47050 * 59.99979 * 7 5 2 34 34 H 1.09000 * 109.47160 * 60.00369 * 8 7 5 35 35 H 1.09002 * 109.46719 * 180.02562 * 8 7 5 36 36 H 0.97007 * 119.99777 * 95.00028 * 11 9 8 37 37 H 1.08994 * 109.46915 * 300.00369 * 14 12 11 38 38 H 1.08999 * 109.46676 * 60.00061 * 14 12 11 39 39 H 1.07995 * 125.03567 * 359.96324 * 16 15 14 40 40 H 1.09001 * 109.46983 * 134.97177 * 18 17 16 41 41 H 0.96694 * 114.00003 * 180.02562 * 19 18 17 42 42 H 1.48497 * 110.00099 * 299.99871 * 20 18 17 43 43 H 1.48507 * 110.00091 * 61.31850 * 20 18 17 44 44 H 1.08000 * 120.11893 * 359.94951 * 22 21 17 45 45 H 1.08010 * 119.73526 * 180.02562 * 23 22 21 46 46 H 1.08001 * 119.67331 * 179.97438 * 24 23 22 47 47 H 1.07987 * 120.11477 * 179.97438 * 25 24 23 48 48 H 1.08992 * 109.47534 * 180.02562 * 27 9 8 49 49 H 1.08996 * 109.47134 * 59.99508 * 27 9 8 50 50 H 1.09000 * 109.47140 * 300.00159 * 28 5 2 51 51 H 1.09001 * 109.47230 * 59.99303 * 28 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3469 0.0000 4 8 2.2667 -0.8841 -1.0162 5 6 2.1887 -0.7357 1.6152 6 1 1.8389 -1.7679 1.6343 7 6 3.7002 -0.7050 1.8512 8 6 4.0161 -1.3250 3.2138 9 6 3.3120 -0.5269 4.3130 10 1 3.5375 -0.9683 5.2838 11 7 3.7824 0.8603 4.2868 12 6 4.9104 1.2019 4.9405 13 8 5.5363 0.3607 5.5502 14 6 5.3939 2.6290 4.9140 15 7 6.6291 2.7406 5.6936 16 6 6.6981 3.1150 7.0079 17 6 7.9765 3.1149 7.4175 18 6 8.4766 3.4669 8.7948 19 8 9.0782 4.7627 8.7664 20 14 7.0488 3.4712 9.9915 21 6 8.7931 2.7064 6.2720 22 6 10.1623 2.5209 6.0733 23 6 10.6225 2.1225 4.8497 24 6 9.7394 1.9014 3.8021 25 6 8.3840 2.0785 3.9762 26 6 7.8932 2.4786 5.2146 27 6 1.8007 -0.5576 4.0770 28 6 1.4846 0.0619 2.7146 29 1 -0.3633 0.5969 0.8365 30 1 -0.3633 0.4259 -0.9353 31 1 -0.3633 -1.0229 0.0987 32 1 4.2018 -1.2732 1.0680 33 1 4.0500 0.3271 1.8321 34 1 3.6662 -2.3571 3.2333 35 1 5.0928 -1.3028 3.3822 36 1 3.2819 1.5330 3.7988 37 1 5.5856 2.9285 3.8837 38 1 4.6324 3.2786 5.3455 39 1 5.8497 3.3727 7.6245 40 1 9.2147 2.7305 9.1125 41 1 9.4235 5.0548 9.6210 42 1 6.0353 4.4711 9.5695 43 1 6.4344 2.1206 10.0541 44 1 10.8556 2.6918 6.8836 45 1 11.6819 1.9787 4.6967 46 1 10.1183 1.5872 2.8408 47 1 7.7050 1.9043 3.1548 48 1 1.2990 0.0113 4.8597 49 1 1.4508 -1.5896 4.0964 50 1 1.8344 1.0941 2.6955 51 1 0.4078 0.0402 2.5464 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14783808_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:35 Heat of formation + Delta-G solvation = -61.029661 kcal Electronic energy + Delta-G solvation = -35473.945873 eV Core-core repulsion = 30854.177670 eV Total energy + Delta-G solvation = -4619.768202 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.149 amu Computer time = 3.98 seconds Orbital eigenvalues (eV) -42.49982 -41.34636 -39.39520 -38.11092 -37.92498 -37.48345 -37.15059 -35.14719 -34.15381 -32.50684 -31.92838 -31.05073 -30.45566 -30.16025 -28.78808 -25.73002 -24.43868 -24.14189 -23.65016 -22.83047 -21.93633 -20.65232 -20.43047 -19.95247 -18.86273 -18.26726 -18.21319 -18.10136 -17.66780 -17.30485 -17.15173 -16.79974 -16.51631 -16.32859 -16.12199 -15.71671 -15.45650 -15.33142 -14.96506 -14.86558 -14.75344 -14.64091 -14.43913 -14.41952 -14.30564 -14.10053 -14.00167 -13.78599 -13.55963 -13.46316 -13.40938 -13.20672 -13.11739 -12.82088 -12.63790 -12.60468 -12.44511 -12.32373 -12.15681 -12.12352 -11.89478 -11.80913 -11.63520 -11.15462 -11.12706 -10.42245 -10.30516 -10.10133 -9.01688 -8.52749 -4.95853 -1.21203 0.28212 0.80726 1.35746 1.37329 1.42800 1.52793 1.60844 1.76184 2.04159 2.09987 2.44008 2.72429 3.07028 3.11752 3.13827 3.37557 3.45384 3.48303 3.59451 3.62234 3.68019 3.69420 3.76221 3.82821 3.83686 3.85386 3.87515 4.03372 4.05953 4.11237 4.15445 4.33511 4.36213 4.37821 4.44050 4.47673 4.55678 4.64681 4.69794 4.71809 4.77271 4.79073 4.81784 4.91254 4.95105 4.99987 5.24979 5.26760 5.65647 5.81035 5.86483 5.90059 6.11559 6.28965 6.37261 6.81224 6.96479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.658 4.658 2 S 2.417 3.583 3 O -0.935 6.935 4 O -0.937 6.937 5 C -0.572 4.572 6 H 0.142 0.858 7 C -0.104 4.104 8 C -0.123 4.123 9 C 0.145 3.855 10 H 0.095 0.905 11 N -0.724 5.724 12 C 0.492 3.508 13 O -0.512 6.512 14 C 0.089 3.911 15 N -0.465 5.465 16 C 0.064 3.936 17 C -0.150 4.150 18 C -0.032 4.032 19 O -0.547 6.547 20 Si 0.682 3.318 21 C -0.086 4.086 22 C -0.063 4.063 23 C -0.145 4.145 24 C -0.095 4.095 25 C -0.127 4.127 26 C 0.110 3.890 27 C -0.120 4.120 28 C -0.114 4.114 29 H 0.130 0.870 30 H 0.131 0.869 31 H 0.130 0.870 32 H 0.082 0.918 33 H 0.080 0.920 34 H 0.080 0.920 35 H 0.078 0.922 36 H 0.401 0.599 37 H 0.121 0.879 38 H 0.121 0.879 39 H 0.162 0.838 40 H 0.070 0.930 41 H 0.378 0.622 42 H -0.254 1.254 43 H -0.256 1.256 44 H 0.123 0.877 45 H 0.124 0.876 46 H 0.126 0.874 47 H 0.116 0.884 48 H 0.079 0.921 49 H 0.087 0.913 50 H 0.081 0.919 51 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.906 0.164 3.089 6.667 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.807 4.807 2 S 2.599 3.401 3 O -0.933 6.933 4 O -0.934 6.934 5 C -0.681 4.681 6 H 0.160 0.840 7 C -0.143 4.143 8 C -0.162 4.162 9 C 0.040 3.960 10 H 0.113 0.887 11 N -0.379 5.379 12 C 0.276 3.724 13 O -0.386 6.386 14 C -0.037 4.037 15 N -0.148 5.148 16 C -0.061 4.061 17 C -0.157 4.157 18 C -0.144 4.144 19 O -0.352 6.352 20 Si 0.583 3.417 21 C -0.090 4.090 22 C -0.082 4.082 23 C -0.164 4.164 24 C -0.115 4.115 25 C -0.148 4.148 26 C 0.006 3.994 27 C -0.158 4.158 28 C -0.152 4.152 29 H 0.149 0.851 30 H 0.150 0.850 31 H 0.149 0.851 32 H 0.101 0.899 33 H 0.098 0.902 34 H 0.098 0.902 35 H 0.096 0.904 36 H 0.237 0.763 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.179 0.821 40 H 0.088 0.912 41 H 0.225 0.775 42 H -0.179 1.179 43 H -0.181 1.181 44 H 0.141 0.859 45 H 0.142 0.858 46 H 0.144 0.856 47 H 0.134 0.866 48 H 0.098 0.902 49 H 0.106 0.894 50 H 0.099 0.901 51 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -6.219 -0.336 2.173 6.596 hybrid contribution -0.906 -0.310 -0.284 0.999 sum -7.125 -0.647 1.889 7.399 Atomic orbital electron populations 1.30307 1.26557 1.11794 1.12078 1.08103 0.78523 0.75990 0.77444 1.93597 1.79038 1.34267 1.86355 1.93627 1.79086 1.67038 1.53621 1.30270 1.05633 1.12710 1.19461 0.83958 1.21317 0.89959 1.03308 0.99673 1.21855 1.01849 0.99557 0.92942 1.20989 0.93258 0.81510 1.00208 0.88736 1.46119 1.26530 1.11331 1.53947 1.21015 0.81114 0.90992 0.79273 1.90810 1.55063 1.51147 1.41596 1.21625 0.87207 0.95333 0.99555 1.43166 1.04050 1.58266 1.09322 1.21400 0.97936 1.02524 0.84216 1.19530 0.91675 1.10420 0.94114 1.23941 1.05377 0.87185 0.97859 1.86541 1.79679 1.32297 1.36718 0.95360 0.78535 0.81094 0.86747 1.18922 0.93138 1.04551 0.92375 1.20278 0.92985 0.97555 0.97384 1.20671 0.99801 1.02837 0.93115 1.20835 0.92022 0.99450 0.99160 1.19965 0.95867 1.04878 0.94049 1.18164 0.83307 1.02489 0.95466 1.21756 0.94674 1.03021 0.96381 1.21507 1.00358 0.99221 0.94103 0.85112 0.85002 0.85147 0.89896 0.90178 0.90164 0.90384 0.76276 0.86119 0.86062 0.82127 0.91193 0.77527 1.17906 1.18064 0.85894 0.85808 0.85615 0.86644 0.90208 0.89446 0.90069 0.89642 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.41 10.01 101.05 1.01 4.42 16 2 S 2.42 -5.09 4.90 -107.50 -0.53 -5.62 16 3 O -0.94 -1.15 18.06 -57.83 -1.04 -2.19 16 4 O -0.94 -2.30 18.10 -57.83 -1.05 -3.34 16 5 C -0.57 2.51 2.62 -26.73 -0.07 2.44 16 6 H 0.14 -0.91 8.14 -51.92 -0.42 -1.33 16 7 C -0.10 0.24 5.05 -26.73 -0.13 0.11 16 8 C -0.12 0.23 5.60 -26.73 -0.15 0.08 16 9 C 0.14 -0.34 2.78 -67.93 -0.19 -0.53 16 10 H 0.09 -0.03 7.58 -51.93 -0.39 -0.42 16 11 N -0.72 1.77 4.23 -53.81 -0.23 1.54 16 12 C 0.49 0.35 7.86 -10.98 -0.09 0.26 16 13 O -0.51 -2.82 16.08 5.55 0.09 -2.73 16 14 C 0.09 -0.07 6.48 -5.20 -0.03 -0.10 16 15 N -0.46 -1.53 2.27 -115.71 -0.26 -1.80 16 16 C 0.06 0.25 9.89 -16.73 -0.17 0.08 16 17 C -0.15 -0.72 5.61 -102.71 -0.58 -1.30 16 18 C -0.03 -0.06 3.05 36.00 0.11 0.05 16 19 O -0.55 -0.99 12.86 -35.23 -0.45 -1.44 16 20 Si 0.68 -0.01 30.79 -169.99 -5.23 -5.25 16 21 C -0.09 -0.49 6.35 -105.14 -0.67 -1.16 16 22 C -0.06 -0.28 10.05 -39.65 -0.40 -0.68 16 23 C -0.15 -0.47 9.97 -39.95 -0.40 -0.87 16 24 C -0.10 -0.29 10.01 -39.54 -0.40 -0.68 16 25 C -0.13 -0.47 10.00 -39.43 -0.39 -0.86 16 26 C 0.11 0.55 6.79 -83.98 -0.57 -0.02 16 27 C -0.12 0.59 5.61 -26.76 -0.15 0.44 16 28 C -0.11 0.65 4.74 -26.76 -0.13 0.53 16 29 H 0.13 -0.94 6.77 -51.93 -0.35 -1.29 16 30 H 0.13 -0.65 8.14 -51.92 -0.42 -1.07 16 31 H 0.13 -0.89 8.14 -51.93 -0.42 -1.31 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.08 -0.17 7.60 -51.93 -0.39 -0.57 16 34 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 35 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.40 -1.98 6.87 -40.82 -0.28 -2.27 16 37 H 0.12 -0.34 8.14 -51.93 -0.42 -0.76 16 38 H 0.12 -0.46 8.12 -51.93 -0.42 -0.88 16 39 H 0.16 0.30 6.30 -52.49 -0.33 -0.03 16 40 H 0.07 0.06 7.96 -51.93 -0.41 -0.36 16 41 H 0.38 -1.32 8.74 45.56 0.40 -0.92 16 42 H -0.25 -0.55 7.04 56.52 0.40 -0.16 16 43 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 44 H 0.12 0.35 8.06 -52.49 -0.42 -0.07 16 45 H 0.12 0.13 8.06 -52.48 -0.42 -0.30 16 46 H 0.13 0.09 8.06 -52.49 -0.42 -0.33 16 47 H 0.12 0.20 8.06 -52.49 -0.42 -0.22 16 48 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 49 H 0.09 -0.48 8.14 -51.93 -0.42 -0.91 16 50 H 0.08 -0.49 6.50 -51.93 -0.34 -0.83 16 51 H 0.09 -0.68 6.39 -51.93 -0.33 -1.01 16 LS Contribution 422.26 15.07 6.36 6.36 Total: 0.00 -16.83 422.26 -13.28 -30.12 By element: Atomic # 1 Polarization: -10.31 SS G_CDS: -7.55 Total: -17.86 kcal Atomic # 6 Polarization: 5.59 SS G_CDS: -3.39 Total: 2.20 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.49 Total: -0.25 kcal Atomic # 8 Polarization: -7.25 SS G_CDS: -2.45 Total: -9.71 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.23 Total: -5.25 kcal Atomic # 16 Polarization: -5.09 SS G_CDS: -0.53 Total: -5.62 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -16.83 -13.28 -30.12 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14783808_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.912 kcal (2) G-P(sol) polarization free energy of solvation -16.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.99 seconds