Wall clock time and date at job start Tue Mar 9 2021 13:11:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.34775 * 120.00158 * 2 1 4 4 O 1.21590 * 120.00177 * 185.31729 * 3 2 1 5 5 C 1.47576 * 120.00202 * 5.32674 * 3 2 1 6 6 C 1.40198 * 119.83488 * 211.44823 * 5 3 2 7 7 C 1.36228 * 120.38311 * 180.02562 * 6 5 3 8 8 C 1.39880 * 119.95672 * 359.97438 * 7 6 5 9 9 C 1.46263 * 133.84083 * 180.02562 * 8 7 6 10 10 C 1.50695 * 126.47958 * 0.02562 * 9 8 7 11 11 O 1.42901 * 109.47526 * 74.71236 * 10 9 8 12 12 Si 1.86305 * 109.46772 * 194.71022 * 10 9 8 13 13 C 1.34457 * 107.03148 * 179.73900 * 9 8 7 14 14 N 1.36560 * 109.98828 * 0.23180 * 13 9 8 15 15 C 1.37833 * 109.86133 * 359.97438 * 14 13 9 16 16 C 1.38643 * 133.37939 * 180.02562 * 15 14 13 17 17 C 1.46502 * 119.99696 * 179.97438 * 2 1 3 18 18 H 1.09010 * 112.84601 * 163.15574 * 17 2 1 19 19 C 1.53780 * 113.61960 * 294.35166 * 17 2 1 20 20 C 1.53781 * 87.07729 * 89.11681 * 19 17 2 21 21 H 1.08997 * 113.61333 * 270.88519 * 20 19 17 22 22 C 1.50699 * 113.61136 * 139.98778 * 20 19 17 23 23 C 1.38242 * 119.99746 * 299.72042 * 22 20 19 24 24 C 1.38231 * 120.00066 * 179.78741 * 23 22 20 25 25 C 1.38238 * 119.99891 * 0.47136 * 24 23 22 26 26 C 1.38237 * 119.99851 * 359.76000 * 25 24 23 27 27 C 1.38227 * 119.99939 * 0.02869 * 26 25 24 28 28 C 1.53779 * 113.61726 * 31.96576 * 17 2 1 29 29 H 1.09003 * 109.47194 * 29.34202 * 1 2 3 30 30 H 1.08999 * 109.47329 * 149.34018 * 1 2 3 31 31 H 1.09001 * 109.47219 * 269.34428 * 1 2 3 32 32 H 1.08001 * 119.80624 * 359.97438 * 6 5 3 33 33 H 1.07996 * 120.02530 * 179.97438 * 7 6 5 34 34 H 1.08996 * 109.47382 * 314.70455 * 10 9 8 35 35 H 0.96696 * 113.99968 * 59.99017 * 11 10 9 36 36 H 1.48490 * 110.00351 * 58.67716 * 12 10 9 37 37 H 1.48500 * 110.00178 * 180.02562 * 12 10 9 38 38 H 1.08000 * 124.99983 * 180.24919 * 13 9 8 39 39 H 0.96992 * 125.06980 * 179.97438 * 14 13 9 40 40 H 1.08001 * 120.16700 * 359.97438 * 16 15 14 41 41 H 1.08999 * 113.61590 * 203.67081 * 19 17 2 42 42 H 1.08999 * 113.61157 * 334.48698 * 19 17 2 43 43 H 1.08000 * 119.99711 * 0.02562 * 23 22 20 44 44 H 1.07994 * 120.00203 * 180.25324 * 24 23 22 45 45 H 1.08000 * 120.00043 * 179.78860 * 25 24 23 46 46 H 1.08004 * 119.99746 * 179.97438 * 26 25 24 47 47 H 1.08002 * 119.99976 * 179.97438 * 27 26 25 48 48 H 1.09005 * 113.60979 * 25.42469 * 28 17 2 49 49 H 1.08997 * 113.61441 * 156.33085 * 28 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3508 1.1694 -0.0976 5 6 1.4058 2.4425 0.1186 6 6 1.9050 3.5945 -0.5052 7 6 1.2377 4.7778 -0.4025 8 6 0.0470 4.8471 0.3283 9 6 -0.8944 5.9246 0.6314 10 6 -0.7905 7.3585 0.1798 11 8 -1.1305 7.4477 -1.2052 12 14 -1.9626 8.4097 1.1759 13 6 -1.8735 5.3922 1.3837 14 7 -1.6330 4.0640 1.5910 15 6 -0.4633 3.6960 0.9614 16 6 0.2243 2.4968 0.8550 17 6 2.1974 -1.2688 0.0006 18 1 3.2417 -1.1548 -0.2906 19 6 2.0023 -2.0923 1.2846 20 6 0.7864 -2.7332 0.5948 21 1 -0.1443 -2.1895 0.7570 22 6 0.6549 -4.2118 0.8547 23 6 1.6651 -5.0736 0.4701 24 6 1.5465 -6.4293 0.7124 25 6 0.4135 -6.9245 1.3305 26 6 -0.5987 -6.0633 1.7108 27 6 -0.4782 -4.7071 1.4724 28 6 1.4702 -2.4003 -0.7449 29 1 -0.3634 0.8958 -0.5036 30 1 -0.3634 -0.8840 -0.5240 31 1 -0.3634 -0.0118 1.0276 32 1 2.8243 3.5438 -1.0698 33 1 1.6276 5.6617 -0.8851 34 1 0.2297 7.7128 0.3271 35 1 -2.0268 7.1482 -1.4103 36 1 -1.6397 8.3005 2.6212 37 1 -1.8702 9.8262 0.7399 38 1 -2.7248 5.9350 1.7671 39 1 -2.2005 3.4684 2.1047 40 1 -0.1589 1.6073 1.3328 41 1 2.8131 -2.7938 1.4808 42 1 1.7444 -1.4891 2.1551 43 1 2.5486 -4.6871 -0.0162 44 1 2.3375 -7.1021 0.4157 45 1 0.3194 -7.9842 1.5167 46 1 -1.4841 -6.4502 2.1933 47 1 -1.2692 -4.0342 1.7691 48 1 0.7816 -2.0457 -1.5119 49 1 2.1358 -3.1859 -1.1024 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:16 Heat of formation + Delta-G solvation = 71.068601 kcal Electronic energy + Delta-G solvation = -31482.947349 eV Core-core repulsion = 27343.516311 eV Total energy + Delta-G solvation = -4139.431038 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.162 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.56643 -41.83816 -40.37507 -38.92735 -37.85028 -37.39280 -35.58585 -33.27120 -32.03933 -31.74849 -30.68198 -30.48679 -28.60414 -26.81437 -26.60138 -26.01447 -24.41949 -23.86123 -23.41121 -22.21197 -21.28738 -20.68266 -19.67054 -19.12119 -18.58357 -17.95135 -17.66200 -17.31736 -16.94931 -16.51814 -16.21244 -16.19702 -16.06587 -15.64235 -15.52875 -15.28363 -15.18738 -15.01569 -14.71343 -14.51011 -14.31103 -14.15885 -14.05412 -14.01985 -13.89243 -13.65212 -13.12884 -13.03329 -12.96037 -12.74238 -12.56376 -12.28438 -12.19749 -12.16013 -11.89475 -11.79940 -11.66965 -11.21235 -10.87955 -10.67112 -10.34530 -9.83894 -9.74095 -9.54568 -9.30770 -8.79745 -5.10967 -0.25243 0.41520 0.47050 0.48595 1.28570 1.35326 1.62026 1.82143 1.85845 1.97349 2.03360 2.81374 2.88550 3.32154 3.48881 3.53983 3.60911 3.64223 3.68222 3.71257 3.88495 3.90564 3.95997 3.96994 4.08812 4.11125 4.15973 4.22343 4.28012 4.33369 4.44202 4.50352 4.51652 4.53277 4.58401 4.62807 4.66427 4.67664 4.74121 4.82938 4.86354 4.93784 4.95903 5.08288 5.11108 5.13119 5.27906 5.46061 5.51980 5.55781 5.58756 5.62682 5.64308 5.72543 6.00740 6.08552 6.30503 6.35706 6.65854 7.16791 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.595 5.595 3 C 0.566 3.434 4 O -0.528 6.528 5 C -0.113 4.113 6 C -0.090 4.090 7 C -0.073 4.073 8 C -0.064 4.064 9 C -0.209 4.209 10 C -0.031 4.031 11 O -0.541 6.541 12 Si 0.685 3.315 13 C 0.075 3.925 14 N -0.586 5.586 15 C 0.082 3.918 16 C -0.098 4.098 17 C 0.119 3.881 18 H 0.111 0.889 19 C -0.139 4.139 20 C -0.079 4.079 21 H 0.101 0.899 22 C -0.071 4.071 23 C -0.117 4.117 24 C -0.117 4.117 25 C -0.124 4.124 26 C -0.118 4.118 27 C -0.117 4.117 28 C -0.141 4.141 29 H 0.082 0.918 30 H 0.080 0.920 31 H 0.059 0.941 32 H 0.134 0.866 33 H 0.131 0.869 34 H 0.111 0.889 35 H 0.377 0.623 36 H -0.256 1.256 37 H -0.254 1.254 38 H 0.178 0.822 39 H 0.420 0.580 40 H 0.137 0.863 41 H 0.095 0.905 42 H 0.073 0.927 43 H 0.123 0.877 44 H 0.122 0.878 45 H 0.121 0.879 46 H 0.121 0.879 47 H 0.119 0.881 48 H 0.078 0.922 49 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.131 -1.948 1.378 8.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.327 5.327 3 C 0.356 3.644 4 O -0.404 6.404 5 C -0.117 4.117 6 C -0.110 4.110 7 C -0.092 4.092 8 C -0.069 4.069 9 C -0.217 4.217 10 C -0.142 4.142 11 O -0.346 6.346 12 Si 0.586 3.414 13 C -0.053 4.053 14 N -0.189 5.189 15 C -0.024 4.024 16 C -0.119 4.119 17 C 0.015 3.985 18 H 0.129 0.871 19 C -0.177 4.177 20 C -0.097 4.097 21 H 0.119 0.881 22 C -0.071 4.071 23 C -0.135 4.135 24 C -0.135 4.135 25 C -0.142 4.142 26 C -0.136 4.136 27 C -0.135 4.135 28 C -0.179 4.179 29 H 0.101 0.899 30 H 0.098 0.902 31 H 0.077 0.923 32 H 0.151 0.849 33 H 0.149 0.851 34 H 0.129 0.871 35 H 0.224 0.776 36 H -0.181 1.181 37 H -0.179 1.179 38 H 0.195 0.805 39 H 0.258 0.742 40 H 0.154 0.846 41 H 0.114 0.886 42 H 0.092 0.908 43 H 0.140 0.860 44 H 0.140 0.860 45 H 0.139 0.861 46 H 0.139 0.861 47 H 0.137 0.863 48 H 0.097 0.903 49 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -7.044 -1.098 1.918 7.382 hybrid contribution 0.113 -0.692 0.370 0.793 sum -6.931 -1.789 2.288 7.515 Atomic orbital electron populations 1.22356 0.79813 1.04195 1.01581 1.47375 1.06700 1.05082 1.73558 1.18283 0.86997 0.83217 0.75919 1.90811 1.13618 1.87044 1.48952 1.19423 0.95711 0.93956 1.02586 1.20663 0.99938 0.90861 0.99521 1.20259 0.93238 0.97956 0.97730 1.19193 0.95906 0.92220 0.99582 1.20741 0.97578 0.96121 1.07272 1.24346 1.06329 0.95291 0.88257 1.86516 1.36902 1.88022 1.23185 0.95341 0.87438 0.80227 0.78353 1.21717 0.99896 0.83656 1.00031 1.41669 1.21121 1.09441 1.46686 1.18050 0.89458 0.95296 0.99622 1.20561 0.94431 0.95746 1.01113 1.21937 0.97538 0.82181 0.96854 0.87147 1.23468 0.97950 0.98755 0.97545 1.21833 0.98970 0.91910 0.96951 0.88095 1.19698 0.94414 0.94696 0.98320 1.21030 0.98809 0.93294 1.00381 1.21184 0.97981 0.95471 0.98855 1.21201 0.94150 0.99889 0.99005 1.21177 0.99005 0.93560 0.99857 1.21045 0.97530 0.95491 0.99484 1.23539 0.99973 0.97892 0.96458 0.89916 0.90154 0.92301 0.84851 0.85147 0.87119 0.77643 1.18121 1.17895 0.80510 0.74208 0.84578 0.88628 0.90843 0.85962 0.85999 0.86092 0.86068 0.86273 0.90344 0.88171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.16 7.08 59.84 0.42 0.27 16 2 N -0.59 -0.36 3.08 -174.21 -0.54 -0.90 16 3 C 0.57 2.01 7.39 -12.45 -0.09 1.92 16 4 O -0.53 -3.83 16.23 5.29 0.09 -3.75 16 5 C -0.11 -0.26 5.28 -104.95 -0.55 -0.82 16 6 C -0.09 -0.25 9.51 -39.57 -0.38 -0.63 16 7 C -0.07 -0.17 10.03 -39.69 -0.40 -0.57 16 8 C -0.06 -0.11 6.35 -105.04 -0.67 -0.78 16 9 C -0.21 0.03 5.57 -102.74 -0.57 -0.54 16 10 C -0.03 0.01 3.06 36.00 0.11 0.12 16 11 O -0.54 -0.12 12.88 -35.23 -0.45 -0.58 16 12 Si 0.68 -1.36 30.75 -169.99 -5.23 -6.59 16 13 C 0.08 -0.20 10.43 -16.78 -0.18 -0.37 16 14 N -0.59 1.49 6.07 -10.68 -0.06 1.43 16 15 C 0.08 0.02 7.26 -84.00 -0.61 -0.59 16 16 C -0.10 -0.01 7.65 -39.03 -0.30 -0.31 16 17 C 0.12 0.04 4.42 -67.12 -0.30 -0.26 16 18 H 0.11 0.23 7.28 -51.92 -0.38 -0.15 16 19 C -0.14 0.07 7.28 -25.92 -0.19 -0.12 16 20 C -0.08 0.11 3.34 -90.82 -0.30 -0.19 16 21 H 0.10 -0.25 5.74 -51.93 -0.30 -0.54 16 22 C -0.07 0.00 5.29 -104.62 -0.55 -0.56 16 23 C -0.12 -0.03 8.63 -39.58 -0.34 -0.37 16 24 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 25 C -0.12 -0.06 10.05 -39.58 -0.40 -0.45 16 26 C -0.12 -0.04 10.05 -39.59 -0.40 -0.43 16 27 C -0.12 -0.01 9.71 -39.59 -0.38 -0.40 16 28 C -0.14 0.18 6.67 -25.78 -0.17 0.01 16 29 H 0.08 -0.20 5.90 -51.93 -0.31 -0.50 16 30 H 0.08 -0.27 5.02 -51.93 -0.26 -0.53 16 31 H 0.06 -0.23 6.62 -51.93 -0.34 -0.58 16 32 H 0.13 0.38 7.92 -52.49 -0.42 -0.04 16 33 H 0.13 0.20 8.06 -52.49 -0.42 -0.23 16 34 H 0.11 0.07 7.96 -51.93 -0.41 -0.34 16 35 H 0.38 -1.44 8.70 45.56 0.40 -1.05 16 36 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 37 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 38 H 0.18 -1.11 6.35 -52.49 -0.33 -1.44 16 39 H 0.42 -2.35 8.96 -40.82 -0.37 -2.72 16 40 H 0.14 -0.31 4.96 -52.49 -0.26 -0.57 16 41 H 0.10 -0.05 7.73 -51.93 -0.40 -0.45 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.12 -0.14 6.64 -52.49 -0.35 -0.48 16 44 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 45 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 46 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 47 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 48 H 0.08 -0.11 6.99 -51.93 -0.36 -0.48 16 49 H 0.10 -0.16 6.30 -51.93 -0.33 -0.49 16 LS Contribution 389.84 15.07 5.87 5.87 Total: 0.00 -9.97 389.84 -13.12 -23.09 By element: Atomic # 1 Polarization: -6.92 SS G_CDS: -6.15 Total: -13.07 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: -6.64 Total: -5.51 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.60 Total: 0.53 kcal Atomic # 8 Polarization: -3.96 SS G_CDS: -0.37 Total: -4.33 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.23 Total: -6.59 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -9.97 -13.12 -23.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.156 kcal (2) G-P(sol) polarization free energy of solvation -9.968 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.188 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.119 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.087 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds