Wall clock time and date at job start Tue Mar 9 2021 13:11:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.34771 * 119.99935 * 2 1 4 4 O 1.21569 * 119.99950 * 185.43992 * 3 2 1 5 5 C 1.47727 * 120.00198 * 5.43794 * 3 2 1 6 6 C 1.39632 * 120.11579 * 211.92879 * 5 3 2 7 7 C 1.37859 * 119.87635 * 180.02562 * 6 5 3 8 8 C 1.50705 * 119.93681 * 180.02562 * 7 6 5 9 9 O 1.42898 * 109.46869 * 254.97553 * 8 7 6 10 10 Si 1.86304 * 109.46846 * 134.97840 * 8 7 6 11 11 C 1.38630 * 120.11894 * 359.97438 * 7 6 5 12 12 F 1.35107 * 119.87840 * 180.02562 * 11 7 6 13 13 C 1.38667 * 120.24160 * 359.97438 * 11 7 6 14 14 C 1.37822 * 120.11730 * 0.02562 * 13 11 7 15 15 C 1.46502 * 119.99617 * 179.97438 * 2 1 3 16 16 H 1.09003 * 112.84304 * 167.22302 * 15 2 1 17 17 C 1.53775 * 113.61711 * 298.41591 * 15 2 1 18 18 C 1.53783 * 87.07834 * 89.12096 * 17 15 2 19 19 H 1.09009 * 113.61025 * 270.87904 * 18 17 15 20 20 C 1.50699 * 113.61553 * 140.06902 * 18 17 15 21 21 C 1.38241 * 119.99744 * 299.72302 * 20 18 17 22 22 C 1.38236 * 119.99927 * 179.79149 * 21 20 18 23 23 C 1.38234 * 119.99685 * 0.45627 * 22 21 20 24 24 C 1.38237 * 120.00444 * 359.78001 * 23 22 21 25 25 C 1.38237 * 119.99939 * 0.02562 * 24 23 22 26 26 C 1.53777 * 87.08270 * 25.43252 * 18 17 15 27 27 H 1.09002 * 109.46977 * 24.33253 * 1 2 3 28 28 H 1.09003 * 109.46800 * 144.32875 * 1 2 3 29 29 H 1.08996 * 109.47742 * 264.33360 * 1 2 3 30 30 H 1.08005 * 120.06328 * 0.03938 * 6 5 3 31 31 H 1.08998 * 109.47416 * 14.97783 * 8 7 6 32 32 H 0.96708 * 114.00294 * 300.00201 * 9 8 7 33 33 H 1.48497 * 109.99676 * 179.97438 * 10 8 7 34 34 H 1.48498 * 109.99899 * 301.31555 * 10 8 7 35 35 H 1.08006 * 119.94475 * 180.02562 * 13 11 7 36 36 H 1.08006 * 120.05466 * 179.72307 * 14 13 11 37 37 H 1.08995 * 113.61342 * 203.66681 * 17 15 2 38 38 H 1.09000 * 113.61736 * 334.48612 * 17 15 2 39 39 H 1.07996 * 119.99592 * 0.02562 * 21 20 18 40 40 H 1.07996 * 120.00190 * 180.25408 * 22 21 20 41 41 H 1.08003 * 120.00203 * 179.79077 * 23 22 21 42 42 H 1.07998 * 120.00251 * 180.02562 * 24 23 22 43 43 H 1.07996 * 120.00289 * 179.97438 * 25 24 23 44 44 H 1.09003 * 113.61212 * 220.02122 * 26 18 17 45 45 H 1.08991 * 113.61412 * 89.11446 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3505 1.1695 -0.0998 5 6 1.4052 2.4437 0.1212 6 6 1.8907 3.5930 -0.5057 7 6 1.2024 4.7817 -0.3889 8 6 1.7247 6.0229 -1.0655 9 8 2.3050 6.8895 -0.0886 10 14 0.3216 6.9016 -1.9200 11 6 0.0301 4.8371 0.3490 12 9 -0.6409 6.0046 0.4598 13 6 -0.4570 3.6985 0.9728 14 6 0.2232 2.5049 0.8625 15 6 2.1974 -1.2688 0.0006 16 1 3.2575 -1.1456 -0.2216 17 6 1.9248 -2.1370 1.2401 18 6 0.7543 -2.7518 0.4548 19 1 -0.1854 -2.2133 0.5787 20 6 0.6075 -4.2382 0.6551 21 6 1.6399 -5.0881 0.3046 22 6 1.5071 -6.4512 0.4923 23 6 0.3381 -6.9652 1.0217 24 6 -0.6961 -6.1158 1.3677 25 6 -0.5617 -4.7523 1.1837 26 6 1.5172 -2.3732 -0.8255 27 1 -0.3633 0.9364 -0.4234 28 1 -0.3633 -0.8349 -0.5993 29 1 -0.3634 -0.1015 1.0226 30 1 2.8036 3.5507 -1.0814 31 1 2.4808 5.7455 -1.8000 32 1 1.6880 7.1771 0.5982 33 1 0.8236 8.1277 -2.5906 34 1 -0.3107 5.9999 -2.9161 35 1 -1.3710 3.7471 1.5461 36 1 -0.1547 1.6197 1.3525 37 1 2.7227 -2.8459 1.4608 38 1 1.6133 -1.5648 2.1141 39 1 2.5517 -4.6867 -0.1124 40 1 2.3152 -7.1148 0.2223 41 1 0.2329 -8.0305 1.1653 42 1 -1.6092 -6.5174 1.7817 43 1 -1.3699 -4.0887 1.4536 44 1 0.8753 -1.9918 -1.6197 45 1 2.2038 -3.1466 -1.1695 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:57 Heat of formation + Delta-G solvation = -6.741685 kcal Electronic energy + Delta-G solvation = -29054.469772 eV Core-core repulsion = 24919.626463 eV Total energy + Delta-G solvation = -4134.843310 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -50.48004 -42.18190 -40.93163 -39.76639 -38.75618 -37.70496 -35.69824 -33.03488 -32.31572 -31.87871 -31.44282 -28.79050 -27.05571 -26.80741 -26.32113 -24.75171 -23.63191 -23.46528 -22.30440 -21.27526 -19.83263 -19.00727 -18.91818 -18.13733 -17.91289 -17.67309 -17.35523 -17.05122 -16.51918 -16.36036 -16.21481 -16.00004 -15.53994 -15.48191 -15.15004 -15.08369 -14.77850 -14.56494 -14.32718 -14.29320 -14.16675 -14.02065 -13.81081 -13.72219 -13.45583 -13.27228 -13.07764 -12.78347 -12.69828 -12.38761 -12.20796 -11.94311 -11.83693 -11.72748 -11.27518 -11.06159 -10.64145 -10.22083 -9.94240 -9.86192 -9.80991 -9.57550 -4.85218 -0.55189 -0.11165 0.39305 0.46595 1.19719 1.48751 1.62316 1.69403 1.95315 2.36510 2.79137 2.82582 3.18136 3.20969 3.38239 3.43007 3.49332 3.56432 3.59997 3.72718 3.83972 3.90844 3.94176 4.00323 4.06900 4.11604 4.17404 4.20371 4.24353 4.43635 4.47225 4.49063 4.55038 4.61092 4.62400 4.64273 4.71724 4.76545 4.81270 4.87819 4.88515 4.97759 5.04002 5.06876 5.10777 5.42220 5.49780 5.54299 5.60773 5.68735 6.06501 6.15569 6.44012 6.98347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.593 5.593 3 C 0.564 3.436 4 O -0.525 6.525 5 C -0.140 4.140 6 C -0.016 4.016 7 C -0.154 4.154 8 C -0.069 4.069 9 O -0.533 6.533 10 Si 0.673 3.327 11 C 0.121 3.879 12 F -0.107 7.107 13 C -0.150 4.150 14 C -0.065 4.065 15 C 0.118 3.882 16 H 0.112 0.888 17 C -0.138 4.138 18 C -0.079 4.079 19 H 0.102 0.898 20 C -0.072 4.072 21 C -0.118 4.118 22 C -0.117 4.117 23 C -0.124 4.124 24 C -0.118 4.118 25 C -0.117 4.117 26 C -0.141 4.141 27 H 0.084 0.916 28 H 0.081 0.919 29 H 0.064 0.936 30 H 0.145 0.855 31 H 0.119 0.881 32 H 0.378 0.622 33 H -0.247 1.247 34 H -0.253 1.253 35 H 0.150 0.850 36 H 0.150 0.850 37 H 0.096 0.904 38 H 0.074 0.926 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.121 0.879 42 H 0.122 0.878 43 H 0.120 0.880 44 H 0.077 0.923 45 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.962 -2.499 1.683 6.680 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.325 5.325 3 C 0.353 3.647 4 O -0.401 6.401 5 C -0.143 4.143 6 C -0.035 4.035 7 C -0.155 4.155 8 C -0.179 4.179 9 O -0.338 6.338 10 Si 0.573 3.427 11 C 0.101 3.899 12 F -0.085 7.085 13 C -0.169 4.169 14 C -0.083 4.083 15 C 0.014 3.986 16 H 0.130 0.870 17 C -0.177 4.177 18 C -0.097 4.097 19 H 0.120 0.880 20 C -0.072 4.072 21 C -0.135 4.135 22 C -0.135 4.135 23 C -0.142 4.142 24 C -0.136 4.136 25 C -0.135 4.135 26 C -0.179 4.179 27 H 0.102 0.898 28 H 0.099 0.901 29 H 0.083 0.917 30 H 0.162 0.838 31 H 0.137 0.863 32 H 0.225 0.775 33 H -0.171 1.171 34 H -0.178 1.178 35 H 0.168 0.832 36 H 0.167 0.833 37 H 0.115 0.885 38 H 0.093 0.907 39 H 0.140 0.860 40 H 0.140 0.860 41 H 0.139 0.861 42 H 0.140 0.860 43 H 0.138 0.862 44 H 0.096 0.904 45 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -5.128 -2.251 0.485 5.621 hybrid contribution 0.195 -0.457 0.148 0.518 sum -4.932 -2.708 0.633 5.662 Atomic orbital electron populations 1.22427 0.79590 1.04269 1.02152 1.47359 1.06830 1.05066 1.73235 1.18213 0.86999 0.83203 0.76283 1.90831 1.13553 1.86984 1.48728 1.19925 0.97064 0.94210 1.03087 1.20990 0.97823 0.89325 0.95393 1.20335 0.95444 0.97884 1.01821 1.25024 1.07237 0.90110 0.95521 1.86565 1.40479 1.65671 1.41077 0.94574 0.82774 0.81946 0.83435 1.17768 0.91186 0.82042 0.98867 1.91184 1.79340 1.45569 1.92436 1.21112 1.02510 0.91151 1.02114 1.21627 0.92519 0.98254 0.95889 1.21970 0.97669 0.82002 0.96960 0.86988 1.23466 0.98248 0.98581 0.97368 1.21811 0.98981 0.91914 0.97018 0.87954 1.19691 0.94156 0.94645 0.98736 1.21025 0.98741 0.93340 1.00436 1.21185 0.97843 0.95340 0.99138 1.21205 0.93799 0.99939 0.99262 1.21187 0.99002 0.93592 0.99802 1.21055 0.97280 0.95374 0.99785 1.23489 0.99799 0.97922 0.96670 0.89775 0.90061 0.91731 0.83763 0.86313 0.77453 1.17124 1.17765 0.83225 0.83278 0.88540 0.90702 0.86000 0.86002 0.86079 0.86030 0.86200 0.90422 0.88164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.22 7.02 59.85 0.42 0.20 16 2 N -0.59 0.38 3.08 -174.16 -0.54 -0.16 16 3 C 0.56 1.15 7.40 -12.39 -0.09 1.06 16 4 O -0.52 -3.13 16.24 5.30 0.09 -3.04 16 5 C -0.14 -0.05 5.28 -104.97 -0.55 -0.60 16 6 C -0.02 -0.02 9.21 -39.20 -0.36 -0.38 16 7 C -0.15 -0.02 4.78 -104.61 -0.50 -0.52 16 8 C -0.07 -0.03 2.81 36.01 0.10 0.07 16 9 O -0.53 -0.66 12.88 -35.23 -0.45 -1.11 16 10 Si 0.67 0.08 29.57 -169.99 -5.03 -4.94 16 11 C 0.12 -0.14 6.63 -39.28 -0.26 -0.40 16 12 F -0.11 0.21 13.46 2.25 0.03 0.24 16 13 C -0.15 0.39 10.01 -39.58 -0.40 -0.01 16 14 C -0.06 0.15 7.52 -39.20 -0.29 -0.15 16 15 C 0.12 -0.07 4.46 -67.12 -0.30 -0.37 16 16 H 0.11 0.13 7.23 -51.93 -0.38 -0.24 16 17 C -0.14 0.19 7.23 -25.92 -0.19 0.01 16 18 C -0.08 0.16 3.33 -90.96 -0.30 -0.14 16 19 H 0.10 -0.33 5.58 -51.92 -0.29 -0.62 16 20 C -0.07 0.03 5.29 -104.62 -0.55 -0.52 16 21 C -0.12 0.02 8.63 -39.58 -0.34 -0.32 16 22 C -0.12 -0.02 10.05 -39.58 -0.40 -0.41 16 23 C -0.12 -0.03 10.05 -39.58 -0.40 -0.42 16 24 C -0.12 -0.01 10.05 -39.58 -0.40 -0.40 16 25 C -0.12 0.03 9.71 -39.58 -0.38 -0.36 16 26 C -0.14 0.27 6.67 -25.92 -0.17 0.10 16 27 H 0.08 -0.35 5.52 -51.93 -0.29 -0.64 16 28 H 0.08 -0.36 5.23 -51.93 -0.27 -0.63 16 29 H 0.06 -0.34 6.91 -51.93 -0.36 -0.70 16 30 H 0.14 0.18 7.89 -52.48 -0.41 -0.24 16 31 H 0.12 0.04 7.77 -51.93 -0.40 -0.36 16 32 H 0.38 -0.87 8.41 45.56 0.38 -0.49 16 33 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 34 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 35 H 0.15 -0.73 8.06 -52.48 -0.42 -1.16 16 36 H 0.15 -0.68 5.20 -52.48 -0.27 -0.95 16 37 H 0.10 -0.12 7.73 -51.93 -0.40 -0.52 16 38 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 39 H 0.12 -0.18 6.65 -52.49 -0.35 -0.53 16 40 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 41 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 42 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 43 H 0.12 -0.23 8.05 -52.49 -0.42 -0.65 16 44 H 0.08 -0.15 7.18 -51.93 -0.37 -0.53 16 45 H 0.10 -0.21 6.31 -51.93 -0.33 -0.54 16 LS Contribution 361.59 15.07 5.45 5.45 Total: 0.00 -7.42 361.59 -11.30 -18.72 By element: Atomic # 1 Polarization: -6.11 SS G_CDS: -5.47 Total: -11.58 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -5.37 Total: -3.57 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.54 Total: -0.16 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -0.37 Total: -4.16 kcal Atomic # 9 Polarization: 0.21 SS G_CDS: 0.03 Total: 0.24 kcal Atomic # 14 Polarization: 0.08 SS G_CDS: -5.03 Total: -4.94 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -7.42 -11.30 -18.72 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.980 kcal (2) G-P(sol) polarization free energy of solvation -7.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.555 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.722 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds