Wall clock time and date at job start Tue Mar 9 2021 13:11:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.34771 * 119.99935 * 2 1 4 4 O 1.21569 * 119.99950 * 185.43992 * 3 2 1 5 5 C 1.47727 * 120.00198 * 5.43794 * 3 2 1 6 6 C 1.39632 * 120.11579 * 211.92879 * 5 3 2 7 7 C 1.37859 * 119.87635 * 180.02562 * 6 5 3 8 8 C 1.50705 * 119.93681 * 180.02562 * 7 6 5 9 9 O 1.42898 * 109.46869 * 254.97553 * 8 7 6 10 10 Si 1.86304 * 109.46846 * 134.97840 * 8 7 6 11 11 C 1.38630 * 120.11894 * 359.97438 * 7 6 5 12 12 F 1.35107 * 119.87840 * 180.02562 * 11 7 6 13 13 C 1.38667 * 120.24160 * 359.97438 * 11 7 6 14 14 C 1.37822 * 120.11730 * 0.02562 * 13 11 7 15 15 C 1.46502 * 119.99617 * 179.97438 * 2 1 3 16 16 H 1.09003 * 112.84304 * 167.22302 * 15 2 1 17 17 C 1.53775 * 113.61711 * 298.41591 * 15 2 1 18 18 C 1.53783 * 87.07834 * 89.12096 * 17 15 2 19 19 H 1.09009 * 113.61025 * 270.87904 * 18 17 15 20 20 C 1.50699 * 113.61553 * 140.06902 * 18 17 15 21 21 C 1.38241 * 119.99744 * 299.72302 * 20 18 17 22 22 C 1.38236 * 119.99927 * 179.79149 * 21 20 18 23 23 C 1.38234 * 119.99685 * 0.45627 * 22 21 20 24 24 C 1.38237 * 120.00444 * 359.78001 * 23 22 21 25 25 C 1.38237 * 119.99939 * 0.02562 * 24 23 22 26 26 C 1.53777 * 87.08270 * 25.43252 * 18 17 15 27 27 H 1.09002 * 109.46977 * 24.33253 * 1 2 3 28 28 H 1.09003 * 109.46800 * 144.32875 * 1 2 3 29 29 H 1.08996 * 109.47742 * 264.33360 * 1 2 3 30 30 H 1.08005 * 120.06328 * 0.03938 * 6 5 3 31 31 H 1.08998 * 109.47416 * 14.97783 * 8 7 6 32 32 H 0.96708 * 114.00294 * 300.00201 * 9 8 7 33 33 H 1.48497 * 109.99676 * 179.97438 * 10 8 7 34 34 H 1.48498 * 109.99899 * 301.31555 * 10 8 7 35 35 H 1.08006 * 119.94475 * 180.02562 * 13 11 7 36 36 H 1.08006 * 120.05466 * 179.72307 * 14 13 11 37 37 H 1.08995 * 113.61342 * 203.66681 * 17 15 2 38 38 H 1.09000 * 113.61736 * 334.48612 * 17 15 2 39 39 H 1.07996 * 119.99592 * 0.02562 * 21 20 18 40 40 H 1.07996 * 120.00190 * 180.25408 * 22 21 20 41 41 H 1.08003 * 120.00203 * 179.79077 * 23 22 21 42 42 H 1.07998 * 120.00251 * 180.02562 * 24 23 22 43 43 H 1.07996 * 120.00289 * 179.97438 * 25 24 23 44 44 H 1.09003 * 113.61212 * 220.02122 * 26 18 17 45 45 H 1.08991 * 113.61412 * 89.11446 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3505 1.1695 -0.0998 5 6 1.4052 2.4437 0.1212 6 6 1.8907 3.5930 -0.5057 7 6 1.2024 4.7817 -0.3889 8 6 1.7247 6.0229 -1.0655 9 8 2.3050 6.8895 -0.0886 10 14 0.3216 6.9016 -1.9200 11 6 0.0301 4.8371 0.3490 12 9 -0.6409 6.0046 0.4598 13 6 -0.4570 3.6985 0.9728 14 6 0.2232 2.5049 0.8625 15 6 2.1974 -1.2688 0.0006 16 1 3.2575 -1.1456 -0.2216 17 6 1.9248 -2.1370 1.2401 18 6 0.7543 -2.7518 0.4548 19 1 -0.1854 -2.2133 0.5787 20 6 0.6075 -4.2382 0.6551 21 6 1.6399 -5.0881 0.3046 22 6 1.5071 -6.4512 0.4923 23 6 0.3381 -6.9652 1.0217 24 6 -0.6961 -6.1158 1.3677 25 6 -0.5617 -4.7523 1.1837 26 6 1.5172 -2.3732 -0.8255 27 1 -0.3633 0.9364 -0.4234 28 1 -0.3633 -0.8349 -0.5993 29 1 -0.3634 -0.1015 1.0226 30 1 2.8036 3.5507 -1.0814 31 1 2.4808 5.7455 -1.8000 32 1 1.6880 7.1771 0.5982 33 1 0.8236 8.1277 -2.5906 34 1 -0.3107 5.9999 -2.9161 35 1 -1.3710 3.7471 1.5461 36 1 -0.1547 1.6197 1.3525 37 1 2.7227 -2.8459 1.4608 38 1 1.6133 -1.5648 2.1141 39 1 2.5517 -4.6867 -0.1124 40 1 2.3152 -7.1148 0.2223 41 1 0.2329 -8.0305 1.1653 42 1 -1.6092 -6.5174 1.7817 43 1 -1.3699 -4.0887 1.4536 44 1 0.8753 -1.9918 -1.6197 45 1 2.2038 -3.1466 -1.1695 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:56 Heat of formation + Delta-G solvation = -1.292546 kcal Electronic energy + Delta-G solvation = -29054.233480 eV Core-core repulsion = 24919.626463 eV Total energy + Delta-G solvation = -4134.607017 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -50.34318 -42.14126 -40.86686 -39.73342 -38.77421 -37.74202 -35.67135 -32.96892 -32.23530 -31.80197 -31.36639 -28.61728 -27.01576 -26.71206 -26.27091 -24.66578 -23.55090 -23.38910 -22.24219 -21.19965 -19.78219 -18.92709 -18.85244 -18.09303 -17.85452 -17.66006 -17.29342 -16.94416 -16.47803 -16.33082 -16.13849 -15.96958 -15.50410 -15.43080 -15.06409 -15.00199 -14.71572 -14.45827 -14.31208 -14.23221 -14.10809 -14.01027 -13.69704 -13.61732 -13.38378 -13.18290 -12.99302 -12.70251 -12.57666 -12.49044 -12.11238 -11.97038 -11.73755 -11.63640 -11.21850 -11.12910 -10.65258 -10.15458 -9.90410 -9.80211 -9.73394 -9.51473 -4.91489 -0.48627 -0.01658 0.44870 0.52171 1.15344 1.45065 1.54252 1.73322 1.86991 2.41501 2.85026 2.93265 3.25169 3.27624 3.46383 3.54279 3.57724 3.66818 3.70979 3.89393 3.95739 4.04177 4.06877 4.15951 4.17162 4.23325 4.27646 4.33134 4.52660 4.57345 4.59060 4.63134 4.68807 4.72278 4.73806 4.77859 4.84982 4.88815 4.91999 4.97582 4.99438 5.06433 5.15365 5.17867 5.19795 5.52052 5.60301 5.61262 5.66601 5.76805 6.14680 6.18657 6.57011 6.92953 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.585 5.585 3 C 0.558 3.442 4 O -0.580 6.580 5 C -0.151 4.151 6 C -0.035 4.035 7 C -0.164 4.164 8 C -0.076 4.076 9 O -0.550 6.550 10 Si 0.749 3.251 11 C 0.121 3.879 12 F -0.099 7.099 13 C -0.139 4.139 14 C -0.051 4.051 15 C 0.110 3.890 16 H 0.085 0.915 17 C -0.133 4.133 18 C -0.066 4.066 19 H 0.122 0.878 20 C -0.079 4.079 21 C -0.129 4.129 22 C -0.132 4.132 23 C -0.139 4.139 24 C -0.130 4.130 25 C -0.125 4.125 26 C -0.134 4.134 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.126 0.874 31 H 0.111 0.889 32 H 0.392 0.608 33 H -0.289 1.289 34 H -0.282 1.282 35 H 0.184 0.816 36 H 0.178 0.822 37 H 0.091 0.909 38 H 0.076 0.924 39 H 0.128 0.872 40 H 0.130 0.870 41 H 0.130 0.870 42 H 0.134 0.866 43 H 0.139 0.861 44 H 0.083 0.917 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.687 -2.809 2.978 9.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 N -0.315 5.315 3 C 0.348 3.652 4 O -0.461 6.461 5 C -0.155 4.155 6 C -0.054 4.054 7 C -0.165 4.165 8 C -0.185 4.185 9 O -0.358 6.358 10 Si 0.653 3.347 11 C 0.101 3.899 12 F -0.078 7.078 13 C -0.157 4.157 14 C -0.069 4.069 15 C 0.006 3.994 16 H 0.103 0.897 17 C -0.171 4.171 18 C -0.084 4.084 19 H 0.140 0.860 20 C -0.079 4.079 21 C -0.147 4.147 22 C -0.150 4.150 23 C -0.157 4.157 24 C -0.148 4.148 25 C -0.142 4.142 26 C -0.172 4.172 27 H 0.110 0.890 28 H 0.111 0.889 29 H 0.109 0.891 30 H 0.144 0.856 31 H 0.128 0.872 32 H 0.242 0.758 33 H -0.216 1.216 34 H -0.208 1.208 35 H 0.201 0.799 36 H 0.196 0.804 37 H 0.109 0.891 38 H 0.095 0.905 39 H 0.146 0.854 40 H 0.148 0.852 41 H 0.148 0.852 42 H 0.152 0.848 43 H 0.157 0.843 44 H 0.101 0.899 45 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -7.895 -2.587 1.806 8.502 hybrid contribution 1.052 -0.383 -0.280 1.154 sum -6.843 -2.970 1.526 7.614 Atomic orbital electron populations 1.22752 0.77239 1.05301 1.04162 1.47431 1.08235 1.04169 1.71673 1.18578 0.86535 0.84422 0.75705 1.90796 1.15881 1.87776 1.51607 1.19879 0.98255 0.93028 1.04307 1.20929 0.97823 0.90324 0.96343 1.20253 0.96334 0.97145 1.02779 1.25103 1.07204 0.90623 0.95592 1.86525 1.41695 1.65877 1.41730 0.93823 0.80951 0.78247 0.81665 1.17870 0.90670 0.82826 0.98503 1.91193 1.79023 1.45344 1.92213 1.21484 1.03135 0.89994 1.01108 1.21913 0.90979 0.99520 0.94464 1.21965 0.96674 0.82517 0.98234 0.89708 1.23406 0.98522 0.98189 0.97001 1.21794 0.99379 0.91091 0.96169 0.85987 1.19880 0.94077 0.95356 0.98561 1.21226 0.99333 0.93500 1.00637 1.21406 0.98314 0.95820 0.99488 1.21439 0.94041 1.00687 0.99518 1.21453 0.99484 0.93990 0.99895 1.21339 0.97812 0.95627 0.99463 1.23450 0.99699 0.97158 0.96909 0.88971 0.88940 0.89066 0.85584 0.87186 0.75776 1.21601 1.20796 0.79877 0.80449 0.89076 0.90487 0.85370 0.85242 0.85205 0.84769 0.84303 0.89887 0.88279 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.46 7.02 127.77 0.90 0.44 16 2 N -0.58 0.80 3.08 -823.19 -2.54 -1.74 16 3 C 0.56 3.01 7.40 86.75 0.64 3.66 16 4 O -0.58 -8.74 16.24 -3.93 -0.06 -8.80 16 5 C -0.15 -0.15 5.28 -20.09 -0.11 -0.26 16 6 C -0.04 -0.13 9.21 22.52 0.21 0.08 16 7 C -0.16 -0.14 4.78 -19.86 -0.09 -0.23 16 8 C -0.08 -0.16 2.81 71.24 0.20 0.04 16 9 O -0.55 -1.85 12.88 -148.98 -1.92 -3.77 16 10 Si 0.75 0.74 29.57 68.60 2.03 2.76 16 11 C 0.12 -0.44 6.63 22.47 0.15 -0.29 16 12 F -0.10 0.56 13.46 44.97 0.61 1.16 16 13 C -0.14 1.11 10.01 22.27 0.22 1.33 16 14 C -0.05 0.34 7.52 22.51 0.17 0.51 16 15 C 0.11 -0.05 4.46 45.51 0.20 0.15 16 16 H 0.08 0.44 7.23 -2.39 -0.02 0.42 16 17 C -0.13 0.40 7.23 31.12 0.23 0.62 16 18 C -0.07 0.36 3.33 -11.01 -0.04 0.32 16 19 H 0.12 -1.14 5.58 -2.38 -0.01 -1.15 16 20 C -0.08 0.13 5.29 -19.86 -0.11 0.02 16 21 C -0.13 0.02 8.63 22.27 0.19 0.21 16 22 C -0.13 -0.09 10.05 22.27 0.22 0.14 16 23 C -0.14 -0.07 10.05 22.27 0.22 0.16 16 24 C -0.13 0.07 10.05 22.27 0.22 0.29 16 25 C -0.12 0.22 9.71 22.27 0.22 0.43 16 26 C -0.13 0.54 6.67 31.12 0.21 0.74 16 27 H 0.09 -1.01 5.52 -2.39 -0.01 -1.02 16 28 H 0.09 -1.06 5.23 -2.39 -0.01 -1.07 16 29 H 0.09 -1.33 6.91 -2.39 -0.02 -1.35 16 30 H 0.13 0.78 7.89 -2.91 -0.02 0.76 16 31 H 0.11 0.36 7.77 -2.39 -0.02 0.34 16 32 H 0.39 -1.77 8.41 -74.05 -0.62 -2.39 16 33 H -0.29 -2.22 7.11 99.48 0.71 -1.51 16 34 H -0.28 -1.56 7.11 99.48 0.71 -0.85 16 35 H 0.18 -2.65 8.06 -2.91 -0.02 -2.67 16 36 H 0.18 -2.27 5.20 -2.91 -0.02 -2.29 16 37 H 0.09 -0.17 7.73 -2.39 -0.02 -0.19 16 38 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 39 H 0.13 -0.30 6.65 -2.91 -0.02 -0.32 16 40 H 0.13 -0.26 8.06 -2.91 -0.02 -0.28 16 41 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 42 H 0.13 -0.53 8.06 -2.91 -0.02 -0.55 16 43 H 0.14 -0.87 8.05 -2.91 -0.02 -0.89 16 44 H 0.08 -0.40 7.18 -2.39 -0.02 -0.42 16 45 H 0.10 -0.36 6.31 -2.39 -0.02 -0.38 16 Total: 0.00 -20.84 361.59 2.43 -18.41 By element: Atomic # 1 Polarization: -16.86 SS G_CDS: 0.45 Total: -16.40 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: 3.86 Total: 8.37 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -2.54 Total: -1.74 kcal Atomic # 8 Polarization: -10.58 SS G_CDS: -1.98 Total: -12.57 kcal Atomic # 9 Polarization: 0.56 SS G_CDS: 0.61 Total: 1.16 kcal Atomic # 14 Polarization: 0.74 SS G_CDS: 2.03 Total: 2.76 kcal Total: -20.84 2.43 -18.41 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.120 kcal (2) G-P(sol) polarization free energy of solvation -20.842 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.723 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.412 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.293 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds