Wall clock time and date at job start Tue Mar 9 2021 13:12:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34781 * 119.99956 * 2 1 4 4 O 1.21625 * 120.00156 * 186.67428 * 3 2 1 5 5 C 1.47260 * 119.99777 * 6.66722 * 3 2 1 6 6 C 1.36774 * 126.94151 * 187.89892 * 5 3 2 7 7 N 1.34664 * 108.39365 * 179.79457 * 6 5 3 8 8 C 1.46498 * 124.84839 * 180.24744 * 7 6 5 9 9 C 1.36442 * 110.29934 * 0.38465 * 7 6 5 10 10 C 1.50701 * 125.57060 * 179.88070 * 9 7 6 11 11 O 1.42897 * 109.47047 * 329.71344 * 10 9 7 12 12 Si 1.86304 * 109.46985 * 209.71663 * 10 9 7 13 13 C 1.34489 * 108.85882 * 359.61051 * 9 7 6 14 14 C 1.46505 * 120.00370 * 179.97438 * 2 1 3 15 15 H 1.08993 * 112.84871 * 158.91399 * 14 2 1 16 16 C 1.53776 * 113.61151 * 290.11097 * 14 2 1 17 17 C 1.53782 * 87.08411 * 89.11597 * 16 14 2 18 18 H 1.09002 * 113.61463 * 270.79942 * 17 16 14 19 19 C 1.50694 * 113.61991 * 139.97847 * 17 16 14 20 20 C 1.38240 * 119.99842 * 299.72739 * 19 17 16 21 21 C 1.38235 * 119.99615 * 179.80652 * 20 19 17 22 22 C 1.38235 * 120.00459 * 0.42473 * 21 20 19 23 23 C 1.38237 * 119.99409 * 359.80577 * 22 21 20 24 24 C 1.38229 * 120.00454 * 0.02562 * 23 22 21 25 25 C 1.53776 * 113.61082 * 27.71916 * 14 2 1 26 26 H 1.08996 * 109.47028 * 33.74591 * 1 2 3 27 27 H 1.09002 * 109.47024 * 153.74955 * 1 2 3 28 28 H 1.09004 * 109.47295 * 273.74305 * 1 2 3 29 29 H 1.07989 * 125.80078 * 0.04372 * 6 5 3 30 30 H 1.09003 * 109.47103 * 270.15854 * 8 7 6 31 31 H 1.09007 * 109.47355 * 30.15765 * 8 7 6 32 32 H 1.08994 * 109.47230 * 150.15302 * 8 7 6 33 33 H 1.08996 * 109.47102 * 89.71509 * 10 9 7 34 34 H 0.96706 * 114.00225 * 180.02562 * 11 10 9 35 35 H 1.48501 * 110.00222 * 59.99908 * 12 10 9 36 36 H 1.48497 * 109.99937 * 181.31764 * 12 10 9 37 37 H 1.07999 * 126.83411 * 180.20244 * 13 9 7 38 38 H 1.09009 * 113.61361 * 203.66019 * 16 14 2 39 39 H 1.08998 * 113.61815 * 334.56527 * 16 14 2 40 40 H 1.07995 * 119.99957 * 0.02562 * 20 19 17 41 41 H 1.08002 * 119.99506 * 180.21014 * 21 20 19 42 42 H 1.07998 * 119.99846 * 179.79088 * 22 21 20 43 43 H 1.08006 * 119.99476 * 179.97438 * 23 22 21 44 44 H 1.07994 * 120.00221 * 179.97438 * 24 23 22 45 45 H 1.08999 * 113.61641 * 25.43198 * 25 14 2 46 46 H 1.08995 * 113.61337 * 156.34007 * 25 14 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3490 1.1709 -0.1224 5 6 1.4100 2.4382 0.1481 6 6 1.9226 3.6997 0.0187 7 7 0.9294 4.5852 0.2257 8 6 1.0805 6.0412 0.1679 9 6 -0.2371 3.9326 0.4998 10 6 -1.5623 4.5897 0.7882 11 8 -1.3404 5.8551 1.4139 12 14 -2.5606 3.5018 1.9244 13 6 -0.0123 2.6071 0.4647 14 6 2.1976 -1.2687 0.0006 15 1 3.2208 -1.1668 -0.3608 16 6 2.0860 -2.0438 1.3240 17 6 0.8293 -2.7085 0.7379 18 1 -0.0901 -2.1589 0.9403 19 6 0.7165 -4.1763 1.0601 20 6 1.7010 -5.0529 0.6438 21 6 1.5996 -6.3987 0.9428 22 6 0.5093 -6.8693 1.6505 23 6 -0.4775 -5.9933 2.0627 24 6 -0.3744 -4.6470 1.7667 25 6 1.4254 -2.4261 -0.6543 26 1 -0.3633 0.8545 -0.5709 27 1 -0.3633 -0.9217 -0.4545 28 1 -0.3634 0.0671 1.0255 29 1 2.9484 3.9439 -0.2143 30 1 1.3445 6.4185 1.1559 31 1 1.8680 6.2970 -0.5411 32 1 0.1416 6.4915 -0.1541 33 1 -2.1060 4.7362 -0.1450 34 1 -2.1518 6.3352 1.6291 35 1 -1.8302 3.2943 3.2005 36 1 -3.8825 4.1236 2.1911 37 1 -0.7350 1.8231 0.6361 38 1 2.9086 -2.7387 1.4938 39 1 1.8824 -1.4087 2.1862 40 1 2.5511 -4.6858 0.0880 41 1 2.3704 -7.0830 0.6205 42 1 0.4285 -7.9212 1.8812 43 1 -1.3295 -6.3611 2.6152 44 1 -1.1455 -3.9628 2.0883 45 1 0.6887 -2.0995 -1.3883 46 1 2.0676 -3.2253 -1.0244 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:40 Heat of formation + Delta-G solvation = 64.669334 kcal Electronic energy + Delta-G solvation = -27594.361376 eV Core-core repulsion = 23839.331267 eV Total energy + Delta-G solvation = -3755.030109 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.48426 -41.52107 -39.91619 -38.53955 -37.93583 -35.43040 -33.64230 -31.90245 -31.64830 -31.41729 -28.60830 -27.68580 -26.62190 -26.26485 -25.62355 -23.79600 -23.24793 -21.85694 -21.33661 -19.83199 -19.40519 -18.70404 -18.28471 -17.89882 -17.21522 -16.86190 -16.53253 -16.30044 -16.07693 -15.83917 -15.60974 -15.44737 -14.93936 -14.82555 -14.67100 -14.24815 -14.17138 -14.12017 -13.95571 -13.68832 -13.45307 -13.29520 -13.27609 -13.15208 -12.90758 -12.77634 -12.62293 -12.38375 -12.10092 -11.99752 -11.67607 -11.51293 -11.09033 -10.91582 -10.61686 -9.75534 -9.57034 -9.53763 -9.41337 -9.06612 -5.08230 0.50073 0.56672 0.88405 0.97379 1.45547 1.51692 1.81820 1.97009 2.24321 2.68677 2.90229 2.94803 3.50537 3.58989 3.74465 3.76552 3.86049 4.02260 4.04975 4.06135 4.12887 4.17023 4.19694 4.23371 4.28830 4.32221 4.33685 4.43754 4.56819 4.60257 4.63194 4.66060 4.73660 4.78369 4.80475 4.87108 4.94851 4.98250 5.06159 5.10042 5.17768 5.22030 5.27504 5.64144 5.69379 5.71030 5.76319 5.86529 6.07673 6.16853 6.17214 6.25757 6.61703 7.49675 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.595 5.595 3 C 0.598 3.402 4 O -0.549 6.549 5 C -0.229 4.229 6 C 0.082 3.918 7 N -0.426 5.426 8 C 0.075 3.925 9 C 0.029 3.971 10 C -0.051 4.051 11 O -0.541 6.541 12 Si 0.703 3.297 13 C -0.178 4.178 14 C 0.122 3.878 15 H 0.106 0.894 16 C -0.140 4.140 17 C -0.078 4.078 18 H 0.103 0.897 19 C -0.070 4.070 20 C -0.118 4.118 21 C -0.118 4.118 22 C -0.126 4.126 23 C -0.118 4.118 24 C -0.117 4.117 25 C -0.141 4.141 26 H 0.090 0.910 27 H 0.078 0.922 28 H 0.060 0.940 29 H 0.177 0.823 30 H 0.076 0.924 31 H 0.080 0.920 32 H 0.093 0.907 33 H 0.080 0.920 34 H 0.384 0.616 35 H -0.251 1.251 36 H -0.258 1.258 37 H 0.166 0.834 38 H 0.092 0.908 39 H 0.073 0.927 40 H 0.122 0.878 41 H 0.121 0.879 42 H 0.120 0.880 43 H 0.121 0.879 44 H 0.121 0.879 45 H 0.079 0.921 46 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.788 0.782 -1.419 6.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.327 5.327 3 C 0.389 3.611 4 O -0.428 6.428 5 C -0.239 4.239 6 C -0.055 4.055 7 N -0.100 5.100 8 C -0.066 4.066 9 C -0.080 4.080 10 C -0.160 4.160 11 O -0.349 6.349 12 Si 0.602 3.398 13 C -0.201 4.201 14 C 0.018 3.982 15 H 0.124 0.876 16 C -0.179 4.179 17 C -0.096 4.096 18 H 0.121 0.879 19 C -0.070 4.070 20 C -0.136 4.136 21 C -0.136 4.136 22 C -0.144 4.144 23 C -0.137 4.137 24 C -0.135 4.135 25 C -0.179 4.179 26 H 0.108 0.892 27 H 0.096 0.904 28 H 0.078 0.922 29 H 0.194 0.806 30 H 0.095 0.905 31 H 0.099 0.901 32 H 0.111 0.889 33 H 0.097 0.903 34 H 0.233 0.767 35 H -0.175 1.175 36 H -0.182 1.182 37 H 0.183 0.817 38 H 0.111 0.889 39 H 0.092 0.908 40 H 0.140 0.860 41 H 0.139 0.861 42 H 0.138 0.862 43 H 0.139 0.861 44 H 0.139 0.861 45 H 0.097 0.903 46 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -4.934 0.931 -0.794 5.083 hybrid contribution -0.265 1.208 0.225 1.257 sum -5.198 2.140 -0.569 5.650 Atomic orbital electron populations 1.22566 0.79931 1.04129 1.02018 1.47208 1.06643 1.04775 1.74054 1.17346 0.86120 0.82473 0.75183 1.90778 1.14009 1.87261 1.50716 1.20090 0.93949 0.92233 1.17592 1.21855 0.93944 0.87808 1.01890 1.43533 1.07475 1.07198 1.51820 1.22148 1.04287 0.76617 1.03525 1.19727 0.87136 0.91622 1.09556 1.24471 0.97601 0.90784 1.03184 1.86548 1.35938 1.30826 1.81611 0.94713 0.77188 0.87045 0.80890 1.22261 0.95277 0.93820 1.08771 1.21859 0.97201 0.82420 0.96733 0.87557 1.23479 0.97554 0.98923 0.97911 1.21819 0.99158 0.91859 0.96757 0.87932 1.19732 0.94636 0.94844 0.97793 1.21032 0.98896 0.93238 1.00391 1.21176 0.98146 0.95654 0.98607 1.21186 0.94601 0.99803 0.98786 1.21177 0.98999 0.93578 0.99896 1.21064 0.97845 0.95630 0.98974 1.23535 1.00149 0.97875 0.96309 0.89209 0.90398 0.92179 0.80600 0.90510 0.90101 0.88869 0.90255 0.76717 1.17524 1.18249 0.81675 0.88913 0.90790 0.85988 0.86087 0.86179 0.86106 0.86143 0.90265 0.88387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.11 7.03 59.85 0.42 0.31 16 2 N -0.59 -0.85 3.07 -174.33 -0.54 -1.39 16 3 C 0.60 2.62 7.65 -12.59 -0.10 2.52 16 4 O -0.55 -4.35 16.48 5.26 0.09 -4.27 16 5 C -0.23 -0.66 6.03 -103.35 -0.62 -1.28 16 6 C 0.08 0.19 11.13 -16.84 -0.19 0.00 16 7 N -0.43 -0.55 3.09 -119.90 -0.37 -0.92 16 8 C 0.08 -0.08 9.81 59.85 0.59 0.50 16 9 C 0.03 0.02 6.17 -81.87 -0.50 -0.48 16 10 C -0.05 0.08 2.85 36.01 0.10 0.18 16 11 O -0.54 0.66 10.31 -35.23 -0.36 0.30 16 12 Si 0.70 -1.52 31.12 -169.99 -5.29 -6.81 16 13 C -0.18 -0.07 7.36 -37.50 -0.28 -0.35 16 14 C 0.12 0.13 4.39 -67.12 -0.29 -0.17 16 15 H 0.11 0.29 7.35 -51.93 -0.38 -0.09 16 16 C -0.14 -0.05 7.32 -25.92 -0.19 -0.24 16 17 C -0.08 0.06 3.35 -90.82 -0.30 -0.24 16 18 H 0.10 -0.19 5.94 -51.93 -0.31 -0.50 16 19 C -0.07 -0.04 5.29 -104.63 -0.55 -0.59 16 20 C -0.12 -0.08 8.63 -39.58 -0.34 -0.42 16 21 C -0.12 -0.10 10.05 -39.58 -0.40 -0.49 16 22 C -0.13 -0.11 10.05 -39.58 -0.40 -0.50 16 23 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 24 C -0.12 -0.06 9.71 -39.59 -0.38 -0.45 16 25 C -0.14 0.13 6.66 -25.77 -0.17 -0.05 16 26 H 0.09 -0.24 5.23 -51.93 -0.27 -0.51 16 27 H 0.08 -0.25 4.88 -51.93 -0.25 -0.51 16 28 H 0.06 -0.19 7.34 -51.93 -0.38 -0.57 16 29 H 0.18 0.21 8.06 -52.49 -0.42 -0.21 16 30 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.21 8.13 -51.93 -0.42 -0.64 16 32 H 0.09 -0.14 6.74 -51.93 -0.35 -0.49 16 33 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 34 H 0.38 -1.91 8.74 45.56 0.40 -1.52 16 35 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 36 H -0.26 0.12 7.11 56.52 0.40 0.52 16 37 H 0.17 -0.44 3.70 -52.49 -0.19 -0.63 16 38 H 0.09 0.03 7.73 -51.92 -0.40 -0.37 16 39 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 40 H 0.12 -0.08 6.64 -52.49 -0.35 -0.43 16 41 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 42 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 43 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 44 H 0.12 -0.14 8.05 -52.49 -0.42 -0.56 16 45 H 0.08 -0.11 6.79 -51.93 -0.35 -0.46 16 46 H 0.10 -0.12 6.30 -51.93 -0.33 -0.45 16 LS Contribution 361.83 15.07 5.45 5.45 Total: 0.00 -9.19 361.83 -11.19 -20.38 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -6.16 Total: -10.52 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -4.01 Total: -2.22 kcal Atomic # 7 Polarization: -1.40 SS G_CDS: -0.91 Total: -2.30 kcal Atomic # 8 Polarization: -3.69 SS G_CDS: -0.28 Total: -3.97 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.29 Total: -6.81 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -9.19 -11.19 -20.38 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.052 kcal (2) G-P(sol) polarization free energy of solvation -9.189 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.194 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.382 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds