Wall clock time and date at job start Tue Mar 9 2021 13:12:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34781 * 119.99956 * 2 1 4 4 O 1.21625 * 120.00156 * 186.67428 * 3 2 1 5 5 C 1.47260 * 119.99777 * 6.66722 * 3 2 1 6 6 C 1.36774 * 126.94151 * 187.89892 * 5 3 2 7 7 N 1.34664 * 108.39365 * 179.79457 * 6 5 3 8 8 C 1.46498 * 124.84839 * 180.24744 * 7 6 5 9 9 C 1.36442 * 110.29934 * 0.38465 * 7 6 5 10 10 C 1.50701 * 125.57060 * 179.88070 * 9 7 6 11 11 O 1.42897 * 109.47047 * 329.71344 * 10 9 7 12 12 Si 1.86304 * 109.46985 * 209.71663 * 10 9 7 13 13 C 1.34489 * 108.85882 * 359.61051 * 9 7 6 14 14 C 1.46505 * 120.00370 * 179.97438 * 2 1 3 15 15 H 1.08993 * 112.84871 * 158.91399 * 14 2 1 16 16 C 1.53776 * 113.61151 * 290.11097 * 14 2 1 17 17 C 1.53782 * 87.08411 * 89.11597 * 16 14 2 18 18 H 1.09002 * 113.61463 * 270.79942 * 17 16 14 19 19 C 1.50694 * 113.61991 * 139.97847 * 17 16 14 20 20 C 1.38240 * 119.99842 * 299.72739 * 19 17 16 21 21 C 1.38235 * 119.99615 * 179.80652 * 20 19 17 22 22 C 1.38235 * 120.00459 * 0.42473 * 21 20 19 23 23 C 1.38237 * 119.99409 * 359.80577 * 22 21 20 24 24 C 1.38229 * 120.00454 * 0.02562 * 23 22 21 25 25 C 1.53776 * 113.61082 * 27.71916 * 14 2 1 26 26 H 1.08996 * 109.47028 * 33.74591 * 1 2 3 27 27 H 1.09002 * 109.47024 * 153.74955 * 1 2 3 28 28 H 1.09004 * 109.47295 * 273.74305 * 1 2 3 29 29 H 1.07989 * 125.80078 * 0.04372 * 6 5 3 30 30 H 1.09003 * 109.47103 * 270.15854 * 8 7 6 31 31 H 1.09007 * 109.47355 * 30.15765 * 8 7 6 32 32 H 1.08994 * 109.47230 * 150.15302 * 8 7 6 33 33 H 1.08996 * 109.47102 * 89.71509 * 10 9 7 34 34 H 0.96706 * 114.00225 * 180.02562 * 11 10 9 35 35 H 1.48501 * 110.00222 * 59.99908 * 12 10 9 36 36 H 1.48497 * 109.99937 * 181.31764 * 12 10 9 37 37 H 1.07999 * 126.83411 * 180.20244 * 13 9 7 38 38 H 1.09009 * 113.61361 * 203.66019 * 16 14 2 39 39 H 1.08998 * 113.61815 * 334.56527 * 16 14 2 40 40 H 1.07995 * 119.99957 * 0.02562 * 20 19 17 41 41 H 1.08002 * 119.99506 * 180.21014 * 21 20 19 42 42 H 1.07998 * 119.99846 * 179.79088 * 22 21 20 43 43 H 1.08006 * 119.99476 * 179.97438 * 23 22 21 44 44 H 1.07994 * 120.00221 * 179.97438 * 24 23 22 45 45 H 1.08999 * 113.61641 * 25.43198 * 25 14 2 46 46 H 1.08995 * 113.61337 * 156.34007 * 25 14 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3490 1.1709 -0.1224 5 6 1.4100 2.4382 0.1481 6 6 1.9226 3.6997 0.0187 7 7 0.9294 4.5852 0.2257 8 6 1.0805 6.0412 0.1679 9 6 -0.2371 3.9326 0.4998 10 6 -1.5623 4.5897 0.7882 11 8 -1.3404 5.8551 1.4139 12 14 -2.5606 3.5018 1.9244 13 6 -0.0123 2.6071 0.4647 14 6 2.1976 -1.2687 0.0006 15 1 3.2208 -1.1668 -0.3608 16 6 2.0860 -2.0438 1.3240 17 6 0.8293 -2.7085 0.7379 18 1 -0.0901 -2.1589 0.9403 19 6 0.7165 -4.1763 1.0601 20 6 1.7010 -5.0529 0.6438 21 6 1.5996 -6.3987 0.9428 22 6 0.5093 -6.8693 1.6505 23 6 -0.4775 -5.9933 2.0627 24 6 -0.3744 -4.6470 1.7667 25 6 1.4254 -2.4261 -0.6543 26 1 -0.3633 0.8545 -0.5709 27 1 -0.3633 -0.9217 -0.4545 28 1 -0.3634 0.0671 1.0255 29 1 2.9484 3.9439 -0.2143 30 1 1.3445 6.4185 1.1559 31 1 1.8680 6.2970 -0.5411 32 1 0.1416 6.4915 -0.1541 33 1 -2.1060 4.7362 -0.1450 34 1 -2.1518 6.3352 1.6291 35 1 -1.8302 3.2943 3.2005 36 1 -3.8825 4.1236 2.1911 37 1 -0.7350 1.8231 0.6361 38 1 2.9086 -2.7387 1.4938 39 1 1.8824 -1.4087 2.1862 40 1 2.5511 -4.6858 0.0880 41 1 2.3704 -7.0830 0.6205 42 1 0.4285 -7.9212 1.8812 43 1 -1.3295 -6.3611 2.6152 44 1 -1.1455 -3.9628 2.0883 45 1 0.6887 -2.0995 -1.3883 46 1 2.0676 -3.2253 -1.0244 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:39 Heat of formation + Delta-G solvation = 68.495396 kcal Electronic energy + Delta-G solvation = -27594.195466 eV Core-core repulsion = 23839.331267 eV Total energy + Delta-G solvation = -3754.864199 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.53584 -41.55782 -40.01782 -38.65817 -37.81808 -35.54760 -33.64925 -31.89658 -31.64721 -31.42149 -28.56391 -27.71003 -26.62272 -26.22107 -25.62876 -23.82805 -23.26876 -21.88042 -21.35504 -19.84249 -19.50328 -18.59235 -18.29539 -17.92655 -17.27266 -16.85348 -16.59472 -16.34256 -16.11184 -15.86089 -15.56074 -15.43811 -14.95128 -14.87825 -14.65141 -14.24435 -14.18527 -14.10270 -13.93503 -13.69884 -13.43138 -13.29188 -13.23585 -13.16878 -12.91859 -12.72979 -12.60598 -12.29874 -12.08121 -11.96599 -11.66431 -11.53224 -11.11876 -10.90566 -10.76769 -9.76121 -9.69615 -9.56374 -9.45080 -9.10579 -4.91378 0.49113 0.56292 0.71655 1.04839 1.50689 1.64888 1.84420 2.03862 2.22013 2.48814 2.89497 3.13109 3.49909 3.67076 3.73907 3.77720 3.89962 3.99144 4.03699 4.08802 4.15723 4.21199 4.29098 4.33381 4.36609 4.40430 4.47114 4.48981 4.63681 4.68313 4.69445 4.74989 4.75921 4.79983 4.81068 4.86417 4.96460 5.00592 5.05392 5.08818 5.20215 5.24723 5.29518 5.64463 5.67473 5.70081 5.72821 5.84589 6.03850 6.18852 6.19672 6.49025 6.53611 7.26499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.044 3.956 2 N -0.589 5.589 3 C 0.588 3.412 4 O -0.600 6.600 5 C -0.250 4.250 6 C 0.066 3.934 7 N -0.430 5.430 8 C 0.073 3.927 9 C 0.016 3.984 10 C -0.057 4.057 11 O -0.558 6.558 12 Si 0.789 3.211 13 C -0.174 4.174 14 C 0.113 3.887 15 H 0.080 0.920 16 C -0.138 4.138 17 C -0.065 4.065 18 H 0.120 0.880 19 C -0.078 4.078 20 C -0.129 4.129 21 C -0.132 4.132 22 C -0.139 4.139 23 C -0.130 4.130 24 C -0.125 4.125 25 C -0.129 4.129 26 H 0.099 0.901 27 H 0.096 0.904 28 H 0.077 0.923 29 H 0.176 0.824 30 H 0.072 0.928 31 H 0.093 0.907 32 H 0.101 0.899 33 H 0.105 0.895 34 H 0.400 0.600 35 H -0.310 1.310 36 H -0.277 1.277 37 H 0.194 0.806 38 H 0.089 0.911 39 H 0.064 0.936 40 H 0.129 0.871 41 H 0.130 0.870 42 H 0.131 0.869 43 H 0.134 0.866 44 H 0.138 0.862 45 H 0.090 0.910 46 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.141 0.793 -1.758 8.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 N -0.319 5.319 3 C 0.380 3.620 4 O -0.483 6.483 5 C -0.260 4.260 6 C -0.072 4.072 7 N -0.103 5.103 8 C -0.067 4.067 9 C -0.093 4.093 10 C -0.165 4.165 11 O -0.369 6.369 12 Si 0.692 3.308 13 C -0.197 4.197 14 C 0.009 3.991 15 H 0.098 0.902 16 C -0.177 4.177 17 C -0.083 4.083 18 H 0.138 0.862 19 C -0.078 4.078 20 C -0.146 4.146 21 C -0.150 4.150 22 C -0.157 4.157 23 C -0.148 4.148 24 C -0.143 4.143 25 C -0.167 4.167 26 H 0.117 0.883 27 H 0.115 0.885 28 H 0.096 0.904 29 H 0.193 0.807 30 H 0.091 0.909 31 H 0.112 0.888 32 H 0.119 0.881 33 H 0.123 0.877 34 H 0.252 0.748 35 H -0.238 1.238 36 H -0.203 1.203 37 H 0.211 0.789 38 H 0.107 0.893 39 H 0.083 0.917 40 H 0.147 0.853 41 H 0.148 0.852 42 H 0.148 0.852 43 H 0.152 0.848 44 H 0.156 0.844 45 H 0.109 0.891 46 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -7.345 0.939 -1.156 7.494 hybrid contribution 0.479 1.230 0.399 1.379 sum -6.866 2.169 -0.756 7.240 Atomic orbital electron populations 1.22876 0.77607 1.05627 1.03566 1.47288 1.08106 1.03984 1.72561 1.17707 0.85724 0.83740 0.74808 1.90735 1.16119 1.88052 1.53432 1.20171 0.95336 0.91702 1.18752 1.21981 0.94411 0.88320 1.02452 1.43746 1.07409 1.07901 1.51289 1.22274 1.05241 0.75481 1.03744 1.20247 0.87883 0.92062 1.09119 1.24659 0.96380 0.90806 1.04648 1.86510 1.37541 1.31051 1.81753 0.93769 0.74296 0.85372 0.77345 1.22571 0.94479 0.94606 1.08025 1.21891 0.96527 0.83000 0.97723 0.90172 1.23436 0.98395 0.98711 0.97146 1.21782 0.99073 0.91248 0.96184 0.86220 1.19885 0.94690 0.95307 0.97882 1.21229 0.99351 0.93432 1.00637 1.21406 0.98625 0.96081 0.98882 1.21435 0.94775 1.00597 0.98915 1.21445 0.99468 0.93850 1.00058 1.21340 0.98262 0.95984 0.98731 1.23484 0.99962 0.96709 0.96559 0.88252 0.88530 0.90429 0.80678 0.90896 0.88792 0.88055 0.87710 0.74823 1.23846 1.20318 0.78917 0.89271 0.91693 0.85308 0.85160 0.85154 0.84763 0.84397 0.89123 0.88133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.24 7.03 127.77 0.90 0.66 16 2 N -0.59 -2.03 3.07 -823.72 -2.53 -4.56 16 3 C 0.59 6.24 7.65 86.61 0.66 6.90 16 4 O -0.60 -11.47 16.48 -4.11 -0.07 -11.54 16 5 C -0.25 -1.70 6.03 -19.04 -0.11 -1.82 16 6 C 0.07 0.41 11.13 83.92 0.93 1.34 16 7 N -0.43 -1.22 3.09 -533.24 -1.65 -2.87 16 8 C 0.07 -0.16 9.81 127.77 1.25 1.10 16 9 C 0.02 0.01 6.17 40.98 0.25 0.27 16 10 C -0.06 0.27 2.85 71.24 0.20 0.47 16 11 O -0.56 1.98 10.31 -148.98 -1.54 0.45 16 12 Si 0.79 -4.35 31.12 68.60 2.13 -2.21 16 13 C -0.17 -0.04 7.36 23.62 0.17 0.13 16 14 C 0.11 0.36 4.39 45.51 0.20 0.56 16 15 H 0.08 0.67 7.35 -2.39 -0.02 0.66 16 16 C -0.14 -0.20 7.32 31.12 0.23 0.03 16 17 C -0.06 0.16 3.35 -10.92 -0.04 0.12 16 18 H 0.12 -0.70 5.94 -2.39 -0.01 -0.72 16 19 C -0.08 -0.03 5.29 -19.87 -0.11 -0.14 16 20 C -0.13 -0.18 8.63 22.27 0.19 0.01 16 21 C -0.13 -0.24 10.05 22.27 0.22 -0.02 16 22 C -0.14 -0.22 10.05 22.27 0.22 0.00 16 23 C -0.13 -0.11 10.05 22.27 0.22 0.12 16 24 C -0.13 -0.01 9.71 22.27 0.22 0.20 16 25 C -0.13 0.28 6.66 31.21 0.21 0.49 16 26 H 0.10 -0.69 5.23 -2.39 -0.01 -0.71 16 27 H 0.10 -0.86 4.88 -2.39 -0.01 -0.87 16 28 H 0.08 -0.66 7.34 -2.39 -0.02 -0.67 16 29 H 0.18 0.87 8.06 -2.92 -0.02 0.84 16 30 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 31 H 0.09 -0.48 8.13 -2.38 -0.02 -0.50 16 32 H 0.10 -0.39 6.74 -2.39 -0.02 -0.40 16 33 H 0.11 -0.98 7.96 -2.39 -0.02 -1.00 16 34 H 0.40 -4.55 8.74 -74.05 -0.65 -5.20 16 35 H -0.31 -1.43 7.11 99.48 0.71 -0.73 16 36 H -0.28 0.64 7.11 99.48 0.71 1.35 16 37 H 0.19 -1.36 3.70 -2.91 -0.01 -1.37 16 38 H 0.09 0.18 7.73 -2.38 -0.02 0.16 16 39 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 40 H 0.13 -0.11 6.64 -2.91 -0.02 -0.13 16 41 H 0.13 -0.14 8.06 -2.91 -0.02 -0.17 16 42 H 0.13 -0.19 8.06 -2.91 -0.02 -0.21 16 43 H 0.13 -0.36 8.06 -2.91 -0.02 -0.39 16 44 H 0.14 -0.57 8.05 -2.91 -0.02 -0.59 16 45 H 0.09 -0.37 6.79 -2.39 -0.02 -0.39 16 46 H 0.10 -0.25 6.30 -2.39 -0.02 -0.26 16 Total: 0.00 -24.15 361.83 2.59 -21.55 By element: Atomic # 1 Polarization: -11.64 SS G_CDS: 0.40 Total: -11.24 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: 5.84 Total: 10.41 kcal Atomic # 7 Polarization: -3.25 SS G_CDS: -4.18 Total: -7.42 kcal Atomic # 8 Polarization: -9.49 SS G_CDS: -1.60 Total: -11.09 kcal Atomic # 14 Polarization: -4.35 SS G_CDS: 2.13 Total: -2.21 kcal Total: -24.15 2.59 -21.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.047 kcal (2) G-P(sol) polarization free energy of solvation -24.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.902 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.551 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds