Wall clock time and date at job start Tue Mar 9 2021 13:13:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34780 * 119.99461 * 2 1 4 4 O 1.21588 * 119.99399 * 185.23043 * 3 2 1 5 5 C 1.47528 * 120.00443 * 5.21970 * 3 2 1 6 6 C 1.40134 * 120.19126 * 146.12092 * 5 3 2 7 7 O 1.35655 * 120.15281 * 359.96014 * 6 5 3 8 8 C 1.38718 * 119.70017 * 179.97438 * 6 5 3 9 9 C 1.38056 * 120.08163 * 359.97438 * 8 6 5 10 10 C 1.50699 * 119.80122 * 179.97438 * 9 8 6 11 11 O 1.42906 * 109.46841 * 65.00526 * 10 9 8 12 12 Si 1.86298 * 109.47069 * 185.00230 * 10 9 8 13 13 C 1.38546 * 120.39203 * 0.02737 * 9 8 6 14 14 C 1.37792 * 120.29822 * 359.69457 * 13 9 8 15 15 C 1.46499 * 120.00278 * 179.97438 * 2 1 3 16 16 H 1.08992 * 112.84802 * 191.20124 * 15 2 1 17 17 C 1.53779 * 113.61287 * 322.50710 * 15 2 1 18 18 C 1.53782 * 87.08254 * 89.11600 * 17 15 2 19 19 H 1.08997 * 113.60968 * 270.88013 * 18 17 15 20 20 C 1.50697 * 113.61493 * 139.97825 * 18 17 15 21 21 C 1.38232 * 119.99989 * 322.23075 * 20 18 17 22 22 C 1.38243 * 119.99911 * 179.78763 * 21 20 18 23 23 C 1.38235 * 119.99719 * 0.46337 * 22 21 20 24 24 C 1.38240 * 120.00368 * 359.76461 * 23 22 21 25 25 C 1.38236 * 119.99532 * 0.02762 * 24 23 22 26 26 C 1.53777 * 87.08095 * 25.42823 * 18 17 15 27 27 H 1.09005 * 109.47326 * 96.05325 * 1 2 3 28 28 H 1.09005 * 109.47266 * 216.05306 * 1 2 3 29 29 H 1.08996 * 109.47884 * 336.05241 * 1 2 3 30 30 H 0.96692 * 113.99966 * 89.99467 * 7 6 5 31 31 H 1.07997 * 119.95436 * 180.02562 * 8 6 5 32 32 H 1.08994 * 109.47442 * 305.00646 * 10 9 8 33 33 H 0.96697 * 113.99844 * 179.97438 * 11 10 9 34 34 H 1.48505 * 110.00042 * 178.68563 * 12 10 9 35 35 H 1.48498 * 110.00045 * 300.00505 * 12 10 9 36 36 H 1.08002 * 119.84990 * 179.97438 * 13 9 8 37 37 H 1.08002 * 120.04071 * 180.27323 * 14 13 9 38 38 H 1.09003 * 113.61440 * 203.66200 * 17 15 2 39 39 H 1.08997 * 113.61983 * 334.56355 * 17 15 2 40 40 H 1.07996 * 120.00032 * 359.97438 * 21 20 18 41 41 H 1.07996 * 120.00249 * 180.24672 * 22 21 20 42 42 H 1.07998 * 120.00142 * 179.79163 * 23 22 21 43 43 H 1.07993 * 120.00487 * 180.02562 * 24 23 22 44 44 H 1.07999 * 119.99792 * 179.97438 * 25 24 23 45 45 H 1.08999 * 113.61973 * 220.02005 * 26 18 17 46 46 H 1.09005 * 113.69087 * 89.12959 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1673 0.0000 4 8 3.3509 1.1695 -0.0960 5 6 1.4057 2.4423 0.1162 6 6 1.9778 3.5244 0.7984 7 8 3.2086 3.4046 1.3561 8 6 1.2797 4.7188 0.9011 9 6 0.0273 4.8393 0.3328 10 6 -0.7257 6.1395 0.4486 11 8 -0.0223 7.1621 -0.2596 12 14 -2.4283 5.9381 -0.2803 13 6 -0.5417 3.7717 -0.3424 14 6 0.1400 2.5799 -0.4590 15 6 2.1976 -1.2687 0.0006 16 1 3.2624 -1.1424 0.1956 17 6 1.5374 -2.3608 0.8587 18 6 0.7442 -2.7581 -0.3974 19 1 -0.1982 -2.2213 -0.5066 20 6 0.5944 -4.2475 -0.5708 21 6 1.6396 -5.0902 -0.2417 22 6 1.5006 -6.4569 -0.3966 23 6 0.3199 -6.9800 -0.8896 24 6 -0.7237 -6.1370 -1.2232 25 6 -0.5862 -4.7707 -1.0642 26 6 1.8954 -2.1549 -1.2193 27 1 -0.3634 -0.1084 -1.0220 28 1 -0.3634 -0.8309 0.6048 29 1 -0.3635 0.9391 0.4171 30 1 3.9337 3.6495 0.7652 31 1 1.7169 5.5555 1.4255 32 1 -0.8107 6.4178 1.4990 33 1 -0.4508 8.0283 -0.2281 34 1 -3.1924 7.2042 -0.1436 35 1 -2.3261 5.5586 -1.7123 36 1 -1.5221 3.8755 -0.7833 37 1 -0.3056 1.7518 -0.9900 38 1 2.2322 -3.1293 1.1976 39 1 0.9146 -1.9678 1.6623 40 1 2.5636 -4.6811 0.1392 41 1 2.3157 -7.1156 -0.1358 42 1 0.2125 -8.0474 -1.0139 43 1 -1.6463 -6.5457 -1.6080 44 1 -1.4013 -4.1120 -1.3252 45 1 1.5618 -1.5956 -2.0934 46 1 2.6888 -2.8661 -1.4495 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:01 Heat of formation + Delta-G solvation = 5.082183 kcal Electronic energy + Delta-G solvation = -28993.098986 eV Core-core repulsion = 25009.540182 eV Total energy + Delta-G solvation = -3983.558805 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.16143 -41.12193 -39.86348 -38.79909 -38.24944 -37.39203 -35.53343 -32.98210 -31.88959 -31.54451 -31.15364 -28.62180 -27.72164 -26.78258 -25.70610 -24.00281 -23.66143 -23.26186 -22.19939 -21.38331 -19.77833 -18.92089 -18.70021 -18.58861 -17.93432 -17.61083 -17.07223 -16.70710 -16.60645 -16.13529 -15.99776 -15.81241 -15.67856 -15.37237 -15.06657 -14.94310 -14.41672 -14.29833 -14.16642 -14.12940 -14.02516 -13.81646 -13.65372 -13.33265 -13.09031 -12.95596 -12.75469 -12.66366 -12.52758 -12.13112 -12.07927 -11.75490 -11.65173 -11.58627 -11.18697 -10.80575 -10.62652 -9.96634 -9.83849 -9.80770 -9.67594 -9.51176 -5.08430 -0.32908 0.12848 0.43863 0.50838 1.13119 1.48565 1.69250 1.82355 1.84956 2.43744 2.83809 3.13009 3.17409 3.31778 3.47758 3.63650 3.66299 3.67499 3.72009 3.90800 3.97247 3.98262 4.02485 4.11283 4.17368 4.18888 4.24520 4.26534 4.31240 4.52118 4.55549 4.56381 4.62363 4.68249 4.69331 4.73724 4.83687 4.87559 4.95803 4.99382 5.09290 5.12452 5.13167 5.16473 5.25096 5.53205 5.57121 5.59152 5.64831 5.74533 6.10855 6.29252 6.30201 6.69273 7.14397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.048 3.952 2 N -0.592 5.592 3 C 0.570 3.430 4 O -0.525 6.525 5 C -0.161 4.161 6 C 0.169 3.831 7 O -0.486 6.486 8 C -0.126 4.126 9 C -0.031 4.031 10 C -0.083 4.083 11 O -0.534 6.534 12 Si 0.688 3.312 13 C -0.135 4.135 14 C -0.078 4.078 15 C 0.120 3.880 16 H 0.111 0.889 17 C -0.141 4.141 18 C -0.080 4.080 19 H 0.103 0.897 20 C -0.071 4.071 21 C -0.117 4.117 22 C -0.117 4.117 23 C -0.125 4.125 24 C -0.118 4.118 25 C -0.117 4.117 26 C -0.138 4.138 27 H 0.064 0.936 28 H 0.079 0.921 29 H 0.094 0.906 30 H 0.403 0.597 31 H 0.139 0.861 32 H 0.081 0.919 33 H 0.383 0.617 34 H -0.259 1.259 35 H -0.253 1.253 36 H 0.136 0.864 37 H 0.150 0.850 38 H 0.099 0.901 39 H 0.077 0.923 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.121 0.879 44 H 0.120 0.880 45 H 0.074 0.926 46 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.817 -0.664 0.835 5.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.325 5.325 3 C 0.359 3.641 4 O -0.401 6.401 5 C -0.164 4.164 6 C 0.123 3.877 7 O -0.298 6.298 8 C -0.145 4.145 9 C -0.031 4.031 10 C -0.192 4.192 11 O -0.342 6.342 12 Si 0.588 3.412 13 C -0.153 4.153 14 C -0.096 4.096 15 C 0.016 3.984 16 H 0.129 0.871 17 C -0.179 4.179 18 C -0.098 4.098 19 H 0.121 0.879 20 C -0.071 4.071 21 C -0.135 4.135 22 C -0.135 4.135 23 C -0.143 4.143 24 C -0.136 4.136 25 C -0.135 4.135 26 C -0.177 4.177 27 H 0.082 0.918 28 H 0.098 0.902 29 H 0.112 0.888 30 H 0.262 0.738 31 H 0.156 0.844 32 H 0.099 0.901 33 H 0.231 0.769 34 H -0.185 1.185 35 H -0.177 1.177 36 H 0.154 0.846 37 H 0.167 0.833 38 H 0.118 0.882 39 H 0.096 0.904 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.139 0.861 44 H 0.138 0.862 45 H 0.092 0.908 46 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -5.617 -1.068 0.551 5.744 hybrid contribution 0.630 1.188 -0.526 1.444 sum -4.987 0.121 0.024 4.989 Atomic orbital electron populations 1.22663 0.79849 1.04756 1.02160 1.47334 1.06764 1.05005 1.73355 1.18053 0.86923 0.83082 0.76073 1.90783 1.13548 1.86987 1.48758 1.20288 0.96961 0.95210 1.03962 1.18389 0.87120 0.90765 0.91463 1.84673 1.13474 1.89941 1.41720 1.21277 0.95045 0.96876 1.01256 1.19306 0.94203 0.93586 0.96005 1.24900 1.05777 0.87924 1.00601 1.86589 1.50827 1.21027 1.75746 0.94999 0.76176 0.86725 0.83266 1.20951 1.00710 0.93011 1.00579 1.21638 0.92555 0.97982 0.97462 1.21929 0.97586 0.82089 0.96761 0.87149 1.23495 0.99726 0.97969 0.96723 1.21827 0.99035 0.91787 0.97134 0.87885 1.19704 0.93995 0.94698 0.98740 1.21026 0.98671 0.93347 1.00492 1.21183 0.97797 0.95267 0.99278 1.21198 0.93712 0.99925 0.99429 1.21183 0.98965 0.93617 0.99842 1.21058 0.97268 0.95302 0.99881 1.23456 0.98247 0.98544 0.97423 0.91770 0.90236 0.88826 0.73841 0.84355 0.90087 0.76919 1.18459 1.17723 0.84626 0.83303 0.88241 0.90422 0.86001 0.86026 0.86111 0.86053 0.86191 0.90765 0.88645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.13 7.09 59.85 0.42 0.29 16 2 N -0.59 -0.34 3.08 -174.23 -0.54 -0.87 16 3 C 0.57 1.91 7.28 -12.47 -0.09 1.82 16 4 O -0.52 -3.47 15.40 -12.86 -0.20 -3.66 16 5 C -0.16 -0.30 5.44 -104.85 -0.57 -0.88 16 6 C 0.17 0.42 6.68 -38.69 -0.26 0.16 16 7 O -0.49 -1.51 12.11 -36.82 -0.45 -1.96 16 8 C -0.13 -0.17 9.60 -39.47 -0.38 -0.55 16 9 C -0.03 -0.01 5.39 -104.58 -0.56 -0.57 16 10 C -0.08 0.09 2.78 36.01 0.10 0.19 16 11 O -0.53 -0.15 12.81 -35.23 -0.45 -0.61 16 12 Si 0.69 -1.51 29.83 -169.99 -5.07 -6.58 16 13 C -0.13 0.12 8.64 -39.63 -0.34 -0.22 16 14 C -0.08 0.06 7.40 -39.20 -0.29 -0.23 16 15 C 0.12 0.04 4.44 -67.12 -0.30 -0.25 16 16 H 0.11 0.24 7.27 -51.93 -0.38 -0.14 16 17 C -0.14 0.16 6.67 -25.92 -0.17 -0.01 16 18 C -0.08 0.11 3.33 -90.96 -0.30 -0.20 16 19 H 0.10 -0.25 5.54 -51.93 -0.29 -0.54 16 20 C -0.07 -0.01 5.29 -104.63 -0.55 -0.56 16 21 C -0.12 -0.04 8.60 -39.58 -0.34 -0.38 16 22 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 23 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 24 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 25 C -0.12 -0.02 9.71 -39.58 -0.38 -0.41 16 26 C -0.14 0.08 7.21 -25.92 -0.19 -0.11 16 27 H 0.06 -0.27 7.42 -51.93 -0.39 -0.65 16 28 H 0.08 -0.28 5.22 -51.93 -0.27 -0.56 16 29 H 0.09 -0.31 4.63 -51.93 -0.24 -0.55 16 30 H 0.40 0.05 9.06 45.56 0.41 0.46 16 31 H 0.14 0.11 8.06 -52.49 -0.42 -0.32 16 32 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 33 H 0.38 -1.40 8.74 45.56 0.40 -1.00 16 34 H -0.26 -0.01 7.11 56.52 0.40 0.40 16 35 H -0.25 -0.18 7.04 56.52 0.40 0.22 16 36 H 0.14 -0.41 4.83 -52.49 -0.25 -0.66 16 37 H 0.15 -0.48 5.04 -52.49 -0.26 -0.74 16 38 H 0.10 -0.14 6.32 -51.93 -0.33 -0.47 16 39 H 0.08 -0.09 7.27 -51.93 -0.38 -0.47 16 40 H 0.12 -0.12 6.68 -52.49 -0.35 -0.47 16 41 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 42 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 43 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 44 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 45 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 46 H 0.10 -0.05 7.72 -51.93 -0.40 -0.45 16 LS Contribution 365.22 15.07 5.50 5.50 Total: 0.00 -9.23 365.22 -11.48 -20.71 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -4.88 Total: -9.25 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -5.40 Total: -3.28 kcal Atomic # 7 Polarization: -0.34 SS G_CDS: -0.54 Total: -0.87 kcal Atomic # 8 Polarization: -5.13 SS G_CDS: -1.10 Total: -6.23 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.07 Total: -6.58 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.23 -11.48 -20.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.790 kcal (2) G-P(sol) polarization free energy of solvation -9.228 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.561 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.708 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds