Wall clock time and date at job start Tue Mar 9 2021 13:13:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.46897 * 110.99964 * 2 1 4 4 C 1.39035 * 111.00254 * 236.04203 * 2 1 3 5 5 C 1.39208 * 119.93088 * 239.73166 * 4 2 1 6 6 C 1.50701 * 119.96293 * 359.97199 * 5 4 2 7 7 O 1.42906 * 109.46888 * 75.00590 * 6 5 4 8 8 Si 1.86302 * 109.46935 * 194.99982 * 6 5 4 9 9 C 1.37623 * 120.06580 * 179.72404 * 5 4 2 10 10 C 1.39776 * 119.93419 * 0.54629 * 9 5 4 11 11 C 1.47517 * 120.07183 * 179.70764 * 10 9 5 12 12 O 1.21597 * 120.00415 * 32.19926 * 11 10 9 13 13 N 1.34781 * 119.99739 * 212.20295 * 11 10 9 14 14 C 1.46494 * 120.00084 * 5.38621 * 13 11 10 15 15 C 1.46508 * 119.99650 * 185.38402 * 13 11 10 16 16 H 1.09000 * 112.84969 * 347.68550 * 15 13 11 17 17 C 1.53780 * 113.61230 * 118.88120 * 15 13 11 18 18 C 1.53780 * 87.07792 * 89.11545 * 17 15 13 19 19 H 1.09007 * 113.61533 * 270.88240 * 18 17 15 20 20 C 1.50700 * 113.61368 * 140.06731 * 18 17 15 21 21 C 1.38237 * 119.99742 * 299.72455 * 20 18 17 22 22 C 1.38242 * 120.00172 * 179.78950 * 21 20 18 23 23 C 1.38235 * 119.99549 * 0.46251 * 22 21 20 24 24 C 1.38243 * 120.00088 * 359.77100 * 23 22 21 25 25 C 1.38232 * 119.99954 * 0.02562 * 24 23 22 26 26 C 1.53775 * 113.61020 * 216.37908 * 15 13 11 27 27 C 1.39819 * 119.85868 * 359.72286 * 10 9 5 28 28 C 1.37582 * 119.93468 * 0.02562 * 27 10 9 29 29 H 1.08999 * 109.47651 * 183.95527 * 1 2 3 30 30 H 1.09004 * 109.46552 * 63.95696 * 1 2 3 31 31 H 1.09006 * 109.47457 * 303.96031 * 1 2 3 32 32 H 1.09004 * 109.47714 * 56.04256 * 3 2 1 33 33 H 1.09005 * 109.47333 * 176.04679 * 3 2 1 34 34 H 1.09000 * 109.46977 * 296.04386 * 3 2 1 35 35 H 1.08994 * 109.47491 * 315.00728 * 6 5 4 36 36 H 0.96692 * 113.99772 * 179.97438 * 7 6 5 37 37 H 1.48495 * 110.00402 * 300.00471 * 8 6 5 38 38 H 1.48501 * 109.99582 * 61.32249 * 8 6 5 39 39 H 1.08005 * 120.03329 * 180.27276 * 9 5 4 40 40 H 1.09002 * 109.47480 * 24.32309 * 14 13 11 41 41 H 1.09002 * 109.47498 * 144.32862 * 14 13 11 42 42 H 1.09004 * 109.46767 * 264.32171 * 14 13 11 43 43 H 1.08994 * 113.61298 * 203.66442 * 17 15 13 44 44 H 1.09001 * 113.61603 * 334.48429 * 17 15 13 45 45 H 1.08001 * 120.00149 * 0.02562 * 21 20 18 46 46 H 1.07988 * 120.00089 * 180.25032 * 22 21 20 47 47 H 1.07997 * 119.99874 * 179.78826 * 23 22 21 48 48 H 1.08001 * 119.99886 * 180.02562 * 24 23 22 49 49 H 1.08001 * 119.99610 * 179.97438 * 25 24 23 50 50 H 1.09003 * 113.61701 * 25.43549 * 26 15 13 51 51 H 1.09008 * 113.61145 * 156.34082 * 26 15 13 52 52 H 1.08004 * 120.03152 * 179.97438 * 27 10 9 53 53 H 1.07992 * 119.97020 * 180.02562 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0766 5 6 2.7839 -1.8297 -0.8517 6 6 3.1270 -2.2376 0.5580 7 8 1.9957 -2.8706 1.1594 8 14 4.5611 -3.4264 0.5289 9 6 3.2741 -2.5528 -1.9151 10 6 2.9605 -2.1702 -3.2224 11 6 3.4895 -2.9392 -4.3647 12 8 3.6700 -4.1371 -4.2599 13 7 3.7729 -2.3139 -5.5246 14 6 3.6683 -0.8556 -5.6152 15 6 4.1856 -3.0929 -6.6948 16 1 4.4310 -4.1264 -6.4503 17 6 3.2340 -2.9531 -7.8947 18 6 4.0857 -1.7488 -8.3295 19 1 3.7513 -0.8017 -7.9057 20 6 4.3134 -1.6761 -9.8174 21 6 4.9601 -2.7097 -10.4689 22 6 5.1651 -2.6452 -11.8345 23 6 4.7319 -1.5426 -12.5470 24 6 4.0895 -0.5068 -11.8947 25 6 3.8807 -0.5734 -10.5298 26 6 5.2491 -2.3926 -7.5570 27 6 2.1446 -1.0568 -3.4451 28 6 1.6534 -0.3411 -2.3777 29 1 -0.3634 -1.0252 0.0709 30 1 -0.3632 0.4512 -0.9234 31 1 -0.3634 0.5741 0.8524 32 1 1.5898 1.9164 0.8524 33 1 3.0828 1.3432 0.0709 34 1 1.7044 1.8723 -0.9233 35 1 3.3988 -1.3543 1.1358 36 1 2.1450 -3.1604 2.0697 37 1 4.2031 -4.6351 -0.2560 38 1 5.7531 -2.7696 -0.0653 39 1 3.9040 -3.4124 -1.7399 40 1 3.7811 -0.4207 -4.6221 41 1 4.4524 -0.4749 -6.2697 42 1 2.6933 -0.5858 -6.0214 43 1 3.2792 -3.7929 -8.5880 44 1 2.2139 -2.6899 -7.6147 45 1 5.3018 -3.5694 -9.9116 46 1 5.6667 -3.4544 -12.3440 47 1 4.8951 -1.4906 -13.6133 48 1 3.7507 0.3544 -12.4514 49 1 3.3792 0.2361 -10.0202 50 1 5.8563 -1.6756 -7.0045 51 1 5.8452 -3.0793 -8.1581 52 1 1.9009 -0.7584 -4.4541 53 1 1.0229 0.5187 -2.5491 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_13422196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:06 Heat of formation + Delta-G solvation = 60.546108 kcal Electronic energy + Delta-G solvation = -33281.198121 eV Core-core repulsion = 29086.687837 eV Total energy + Delta-G solvation = -4194.510284 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.193 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.30118 -41.33208 -40.28490 -38.94614 -37.74804 -37.39301 -35.69362 -33.08604 -32.05549 -31.76603 -31.17658 -28.69864 -28.52337 -26.94013 -26.91669 -26.60352 -25.46407 -23.70080 -23.18227 -22.94000 -22.01184 -21.20532 -19.81140 -18.60209 -18.32664 -18.24820 -17.78540 -17.56849 -17.22222 -16.56531 -16.30323 -16.17837 -16.06296 -15.95421 -15.58764 -15.38916 -15.05841 -15.00318 -14.68284 -14.49603 -14.41961 -14.25742 -14.10130 -14.00811 -13.86293 -13.70437 -13.50938 -13.39318 -13.17917 -12.99970 -12.91179 -12.75295 -12.68097 -12.63346 -12.22499 -12.14382 -12.04112 -11.79878 -11.70085 -11.26525 -11.16070 -10.27353 -10.20543 -9.98748 -9.83779 -9.79357 -9.55977 -9.52684 -5.06938 -0.47153 -0.00623 0.41136 0.48716 1.25867 1.38033 1.53776 1.65243 1.92156 2.36212 2.74392 2.81201 3.18571 3.37588 3.40410 3.55174 3.60425 3.64936 3.80879 3.88682 3.94302 3.99974 4.05132 4.07170 4.13501 4.16181 4.19489 4.28557 4.37694 4.39087 4.40796 4.44059 4.51450 4.55010 4.58875 4.61534 4.62215 4.66882 4.69612 4.71182 4.77122 4.87212 4.90888 4.91862 4.99300 4.99868 5.00805 5.09218 5.11612 5.15728 5.16304 5.40619 5.47959 5.57268 5.63113 5.72179 5.85776 6.07248 6.11098 6.22828 6.81895 6.96270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.517 5.517 3 C 0.024 3.976 4 C 0.142 3.858 5 C -0.081 4.081 6 C -0.045 4.045 7 O -0.554 6.554 8 Si 0.752 3.248 9 C -0.085 4.085 10 C -0.148 4.148 11 C 0.555 3.445 12 O -0.584 6.584 13 N -0.584 5.584 14 C 0.050 3.950 15 C 0.107 3.893 16 H 0.084 0.916 17 C -0.132 4.132 18 C -0.066 4.066 19 H 0.120 0.880 20 C -0.079 4.079 21 C -0.129 4.129 22 C -0.131 4.131 23 C -0.137 4.137 24 C -0.130 4.130 25 C -0.125 4.125 26 C -0.133 4.133 27 C -0.063 4.063 28 C -0.152 4.152 29 H 0.058 0.942 30 H 0.041 0.959 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.068 0.932 34 H 0.043 0.957 35 H 0.096 0.904 36 H 0.400 0.600 37 H -0.307 1.307 38 H -0.291 1.291 39 H 0.108 0.892 40 H 0.087 0.913 41 H 0.095 0.905 42 H 0.088 0.912 43 H 0.093 0.907 44 H 0.074 0.926 45 H 0.128 0.872 46 H 0.131 0.869 47 H 0.132 0.868 48 H 0.135 0.865 49 H 0.138 0.862 50 H 0.082 0.918 51 H 0.102 0.898 52 H 0.168 0.832 53 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.895 8.532 1.164 8.657 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 N -0.238 5.238 3 C -0.122 4.122 4 C 0.048 3.952 5 C -0.082 4.082 6 C -0.156 4.156 7 O -0.363 6.363 8 Si 0.661 3.339 9 C -0.104 4.104 10 C -0.151 4.151 11 C 0.346 3.654 12 O -0.465 6.465 13 N -0.314 5.314 14 C -0.091 4.091 15 C 0.003 3.997 16 H 0.102 0.898 17 C -0.170 4.170 18 C -0.084 4.084 19 H 0.138 0.862 20 C -0.079 4.079 21 C -0.147 4.147 22 C -0.149 4.149 23 C -0.155 4.155 24 C -0.148 4.148 25 C -0.143 4.143 26 C -0.171 4.171 27 C -0.082 4.082 28 C -0.172 4.172 29 H 0.076 0.924 30 H 0.059 0.941 31 H 0.108 0.892 32 H 0.108 0.892 33 H 0.087 0.913 34 H 0.061 0.939 35 H 0.114 0.886 36 H 0.250 0.750 37 H -0.237 1.237 38 H -0.219 1.219 39 H 0.125 0.875 40 H 0.106 0.894 41 H 0.114 0.886 42 H 0.107 0.893 43 H 0.112 0.888 44 H 0.093 0.907 45 H 0.146 0.854 46 H 0.149 0.851 47 H 0.150 0.850 48 H 0.153 0.847 49 H 0.155 0.845 50 H 0.101 0.899 51 H 0.120 0.880 52 H 0.186 0.814 53 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -0.326 7.432 0.607 7.464 hybrid contribution -0.292 0.032 -1.231 1.265 sum -0.618 7.465 -0.624 7.516 Atomic orbital electron populations 1.22452 0.84342 1.02542 1.02034 1.59350 1.09596 1.14910 1.39986 1.22571 1.01008 0.86195 1.02380 1.18935 0.93359 0.92951 0.89989 1.19454 0.98848 0.95704 0.94163 1.24358 0.96770 1.02935 0.91572 1.86442 1.36640 1.79467 1.33745 0.94883 0.74601 0.76661 0.87731 1.20974 0.99177 0.97841 0.92426 1.19746 1.04006 0.99109 0.92224 1.18598 0.77085 0.86555 0.83206 1.90783 1.55148 1.16974 1.83581 1.47427 1.65877 1.08730 1.09343 1.22706 1.04218 0.77467 1.04689 1.22016 0.97202 0.95986 0.84483 0.89786 1.23407 0.98672 0.98793 0.96168 1.21772 0.96624 0.99480 0.90478 0.86181 1.19847 0.98172 0.94537 0.95368 1.21223 0.99605 0.99093 0.94754 1.21412 1.00146 0.98767 0.94596 1.21450 0.98915 0.94343 1.00832 1.21454 0.98935 0.99292 0.95071 1.21326 1.00240 0.98274 0.94444 1.23453 0.96229 1.00246 0.97137 1.21802 0.93471 0.91348 1.01536 1.21950 1.01485 1.01779 0.91980 0.92355 0.94069 0.89249 0.89233 0.91304 0.93877 0.88609 0.74964 1.23653 1.21856 0.87482 0.89419 0.88619 0.89348 0.88808 0.90713 0.85396 0.85109 0.85040 0.84685 0.84450 0.89937 0.87998 0.81447 0.82354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.34 127.69 1.19 1.14 16 2 N -0.52 -0.05 4.20 -745.09 -3.13 -3.18 16 3 C 0.02 -0.11 9.38 127.69 1.20 1.09 16 4 C 0.14 0.44 4.70 38.47 0.18 0.62 16 5 C -0.08 -0.58 5.30 -19.78 -0.10 -0.68 16 6 C -0.04 -0.14 2.32 71.24 0.17 0.03 16 7 O -0.55 -1.65 12.86 -148.98 -1.92 -3.56 16 8 Si 0.75 2.75 30.21 68.60 2.07 4.82 16 9 C -0.09 -0.95 8.20 22.50 0.18 -0.77 16 10 C -0.15 -1.17 5.27 -20.08 -0.11 -1.28 16 11 C 0.56 6.21 7.39 86.69 0.64 6.85 16 12 O -0.58 -12.13 16.24 -4.02 -0.07 -12.19 16 13 N -0.58 -1.80 3.08 -823.41 -2.54 -4.33 16 14 C 0.05 -0.28 7.03 127.77 0.90 0.62 16 15 C 0.11 0.30 4.47 45.51 0.20 0.50 16 16 H 0.08 0.71 7.22 -2.39 -0.02 0.69 16 17 C -0.13 0.05 7.23 31.12 0.22 0.28 16 18 C -0.07 0.21 3.33 -11.02 -0.04 0.17 16 19 H 0.12 -0.81 5.57 -2.38 -0.01 -0.82 16 20 C -0.08 0.00 5.29 -19.87 -0.11 -0.10 16 21 C -0.13 -0.14 8.63 22.27 0.19 0.05 16 22 C -0.13 -0.20 10.05 22.27 0.22 0.03 16 23 C -0.14 -0.17 10.05 22.27 0.22 0.06 16 24 C -0.13 -0.05 10.05 22.27 0.22 0.17 16 25 C -0.12 0.05 9.71 22.27 0.22 0.27 16 26 C -0.13 0.21 6.67 31.12 0.21 0.42 16 27 C -0.06 0.00 7.52 22.50 0.17 0.16 16 28 C -0.15 0.13 8.53 22.36 0.19 0.32 16 29 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 30 H 0.04 -0.16 7.10 -2.38 -0.02 -0.18 16 31 H 0.09 -0.39 8.12 -2.38 -0.02 -0.41 16 32 H 0.09 -0.58 8.12 -2.39 -0.02 -0.60 16 33 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 34 H 0.04 -0.27 7.32 -2.39 -0.02 -0.29 16 35 H 0.10 -0.03 7.78 -2.39 -0.02 -0.05 16 36 H 0.40 -2.90 8.74 -74.06 -0.65 -3.54 16 37 H -0.31 -4.22 6.74 99.48 0.67 -3.55 16 38 H -0.29 -2.66 7.11 99.48 0.71 -1.96 16 39 H 0.11 1.68 4.78 -2.91 -0.01 1.66 16 40 H 0.09 -0.51 5.53 -2.39 -0.01 -0.52 16 41 H 0.10 -0.79 5.22 -2.39 -0.01 -0.80 16 42 H 0.09 -0.89 6.92 -2.38 -0.02 -0.91 16 43 H 0.09 0.02 7.73 -2.39 -0.02 0.00 16 44 H 0.07 -0.02 8.14 -2.39 -0.02 -0.03 16 45 H 0.13 -0.13 6.65 -2.91 -0.02 -0.15 16 46 H 0.13 -0.18 8.06 -2.92 -0.02 -0.20 16 47 H 0.13 -0.25 8.06 -2.91 -0.02 -0.27 16 48 H 0.14 -0.42 8.06 -2.91 -0.02 -0.45 16 49 H 0.14 -0.64 8.05 -2.91 -0.02 -0.66 16 50 H 0.08 -0.20 7.21 -2.39 -0.02 -0.21 16 51 H 0.10 -0.19 6.31 -2.38 -0.02 -0.20 16 52 H 0.17 -1.03 5.21 -2.91 -0.02 -1.05 16 53 H 0.16 -1.00 6.99 -2.91 -0.02 -1.02 16 Total: 0.00 -25.10 410.00 0.90 -24.20 By element: Atomic # 1 Polarization: -15.99 SS G_CDS: 0.29 Total: -15.69 kcal Atomic # 6 Polarization: 3.76 SS G_CDS: 6.18 Total: 9.94 kcal Atomic # 7 Polarization: -1.85 SS G_CDS: -5.67 Total: -7.52 kcal Atomic # 8 Polarization: -13.78 SS G_CDS: -1.98 Total: -15.76 kcal Atomic # 14 Polarization: 2.75 SS G_CDS: 2.07 Total: 4.82 kcal Total: -25.10 0.90 -24.20 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13422196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.747 kcal (2) G-P(sol) polarization free energy of solvation -25.100 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.900 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.201 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds