Wall clock time and date at job start Tue Mar 9 2021 13:13:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37872 * 126.46034 * 2 1 4 4 C 1.46682 * 126.22716 * 359.96783 * 3 2 1 5 5 O 1.21695 * 120.00347 * 6.98125 * 4 3 2 6 6 N 1.34780 * 119.99610 * 186.97716 * 4 3 2 7 7 C 1.46504 * 119.99908 * 6.26721 * 6 4 3 8 8 C 1.46494 * 120.00130 * 186.26568 * 6 4 3 9 9 H 1.09004 * 112.90908 * 348.74733 * 8 6 4 10 10 C 1.53781 * 113.61662 * 120.00237 * 8 6 4 11 11 C 1.53776 * 87.17192 * 89.07341 * 10 8 6 12 12 H 1.09001 * 113.61757 * 270.92705 * 11 10 8 13 13 C 1.50707 * 113.61131 * 140.02394 * 11 10 8 14 14 C 1.38236 * 119.99869 * 299.72529 * 13 11 10 15 15 C 1.38240 * 119.99845 * 179.81287 * 14 13 11 16 16 C 1.38239 * 119.99875 * 0.41566 * 15 14 13 17 17 C 1.38240 * 119.99741 * 359.82014 * 16 15 14 18 18 C 1.38232 * 119.99789 * 120.00319 * 13 11 10 19 19 C 1.53786 * 113.61422 * 217.50101 * 8 6 4 20 20 N 1.37647 * 107.53290 * 179.70371 * 3 2 1 21 21 C 1.35533 * 108.64686 * 0.26502 * 20 3 2 22 22 C 1.50694 * 125.56286 * 180.02562 * 21 20 3 23 23 O 1.42904 * 109.47178 * 299.99446 * 22 21 20 24 24 Si 1.86298 * 109.47094 * 179.97438 * 22 21 20 25 25 C 1.35447 * 108.86896 * 359.97438 * 21 20 3 26 26 H 1.08995 * 109.47469 * 89.99934 * 1 2 3 27 27 H 1.08996 * 109.47125 * 210.00111 * 1 2 3 28 28 H 1.08996 * 109.46995 * 329.99461 * 1 2 3 29 29 H 1.08993 * 109.46937 * 275.33360 * 7 6 4 30 30 H 1.09001 * 109.46950 * 35.33181 * 7 6 4 31 31 H 1.08999 * 109.46884 * 155.33310 * 7 6 4 32 32 H 1.08997 * 113.61537 * 203.66781 * 10 8 6 33 33 H 1.09003 * 113.61200 * 334.48397 * 10 8 6 34 34 H 1.08001 * 119.99843 * 0.02562 * 14 13 11 35 35 H 1.07994 * 119.99724 * 180.21238 * 15 14 13 36 36 H 1.07998 * 119.99724 * 179.78854 * 16 15 14 37 37 H 1.08001 * 119.99592 * 179.97438 * 17 16 15 38 38 H 1.07999 * 120.00025 * 359.97438 * 18 13 11 39 39 H 1.09000 * 113.61293 * 25.43458 * 19 8 6 40 40 H 1.09001 * 113.60787 * 156.33281 * 19 8 6 41 41 H 0.96999 * 125.67230 * 180.24245 * 20 3 2 42 42 H 1.09001 * 109.47751 * 59.99515 * 22 21 20 43 43 H 0.96696 * 113.99734 * 300.00617 * 23 22 21 44 44 H 1.48502 * 110.00477 * 58.67730 * 24 22 21 45 45 H 1.48502 * 110.00268 * 179.97438 * 24 22 21 46 46 H 1.08007 * 126.06563 * 180.02562 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3264 1.1089 0.0000 4 6 1.8899 2.5092 -0.0007 5 8 0.7100 2.7790 0.1268 6 7 2.7955 3.4973 -0.1424 7 6 4.1943 3.1726 -0.4328 8 6 2.3813 4.8958 -0.0061 9 1 1.2982 5.0175 0.0138 10 6 3.1063 5.6458 1.1238 11 6 4.1829 6.0100 0.0880 12 1 4.9829 5.2735 0.0122 13 6 4.6953 7.4211 0.2205 14 6 3.8256 8.4874 0.0881 15 6 4.2949 9.7817 0.2135 16 6 5.6353 10.0097 0.4628 17 6 6.5058 8.9434 0.5904 18 6 6.0358 7.6491 0.4688 19 6 3.0900 5.8465 -0.9853 20 7 3.6284 0.6624 0.0068 21 6 3.6218 -0.6929 0.0050 22 6 4.8433 -1.5753 0.0113 23 8 5.6310 -1.3068 -1.1504 24 14 4.3182 -3.3628 0.0066 25 6 2.3380 -1.1247 -0.0023 26 1 -0.3634 0.0000 -1.0276 27 1 -0.3633 -0.8899 0.5138 28 1 -0.3633 0.8899 0.5139 29 1 4.7189 2.9603 0.4987 30 1 4.2371 2.2977 -1.0814 31 1 4.6675 4.0184 -0.9317 32 1 2.5542 6.5066 1.5010 33 1 3.4681 4.9936 1.9188 34 1 2.7790 8.3093 -0.1099 35 1 3.6148 10.6146 0.1135 36 1 6.0025 11.0210 0.5574 37 1 7.5531 9.1216 0.7847 38 1 6.7160 6.8161 0.5682 39 1 3.4398 5.3562 -1.8938 40 1 2.5334 6.7622 -1.1847 41 1 4.4190 1.2243 0.0117 42 1 5.4334 -1.3728 0.9051 43 1 5.1684 -1.4657 -1.9846 44 1 3.4860 -3.6446 -1.1906 45 1 5.5139 -4.2435 0.0121 46 1 2.0136 -2.1549 -0.0049 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:21 Heat of formation + Delta-G solvation = 58.162631 kcal Electronic energy + Delta-G solvation = -27722.380581 eV Core-core repulsion = 23967.068320 eV Total energy + Delta-G solvation = -3755.312261 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.82669 -41.65573 -40.05407 -38.78785 -37.90351 -35.81737 -33.42643 -32.24688 -31.84650 -31.30281 -29.05172 -27.97294 -27.26164 -26.83576 -25.44153 -23.77275 -23.03847 -22.01200 -21.54495 -20.24516 -20.03066 -18.87212 -18.40541 -17.87891 -17.38135 -16.95081 -16.54945 -16.38969 -16.25038 -15.97221 -15.54504 -15.26140 -15.09774 -14.96731 -14.44163 -14.32845 -14.26974 -14.21527 -13.98754 -13.89855 -13.68204 -13.55389 -13.42962 -13.17639 -13.11271 -12.91802 -12.74171 -12.26047 -12.17656 -11.88064 -11.81151 -11.70997 -11.27266 -11.06291 -10.77261 -9.91924 -9.85389 -9.76673 -9.58796 -9.13427 -4.98632 0.35989 0.39394 0.46117 1.10979 1.53944 1.59203 1.68930 1.85170 2.19650 2.33595 2.78528 3.17251 3.26458 3.48741 3.51802 3.57029 3.60309 3.67365 3.81664 3.89506 4.02754 4.06618 4.09656 4.16044 4.19863 4.21522 4.30026 4.38794 4.48327 4.52827 4.61025 4.62264 4.75238 4.76199 4.79173 4.87216 4.88688 5.02158 5.03908 5.05989 5.10116 5.23530 5.40694 5.47237 5.53661 5.60224 5.67053 5.70039 5.92305 6.05955 6.18385 6.22702 6.31058 7.08607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C -0.063 4.063 3 C -0.054 4.054 4 C 0.595 3.405 5 O -0.518 6.518 6 N -0.600 5.600 7 C 0.047 3.953 8 C 0.120 3.880 9 H 0.115 0.885 10 C -0.138 4.138 11 C -0.082 4.082 12 H 0.102 0.898 13 C -0.072 4.072 14 C -0.117 4.117 15 C -0.117 4.117 16 C -0.124 4.124 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.141 4.141 20 N -0.530 5.530 21 C 0.021 3.979 22 C -0.061 4.061 23 O -0.535 6.535 24 Si 0.717 3.283 25 C -0.199 4.199 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.083 0.917 29 H 0.061 0.939 30 H 0.075 0.925 31 H 0.097 0.903 32 H 0.097 0.903 33 H 0.073 0.927 34 H 0.123 0.877 35 H 0.122 0.878 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.119 0.881 39 H 0.076 0.924 40 H 0.101 0.899 41 H 0.421 0.579 42 H 0.120 0.880 43 H 0.380 0.620 44 H -0.255 1.255 45 H -0.255 1.255 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.490 -0.313 0.673 2.598 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.072 4.072 3 C -0.167 4.167 4 C 0.385 3.615 5 O -0.394 6.394 6 N -0.333 5.333 7 C -0.096 4.096 8 C 0.016 3.984 9 H 0.133 0.867 10 C -0.176 4.176 11 C -0.100 4.100 12 H 0.120 0.880 13 C -0.072 4.072 14 C -0.135 4.135 15 C -0.135 4.135 16 C -0.142 4.142 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.179 4.179 20 N -0.134 5.134 21 C -0.097 4.097 22 C -0.170 4.170 23 O -0.341 6.341 24 Si 0.616 3.384 25 C -0.223 4.223 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.102 0.898 29 H 0.079 0.921 30 H 0.093 0.907 31 H 0.116 0.884 32 H 0.116 0.884 33 H 0.092 0.908 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.137 0.863 39 H 0.095 0.905 40 H 0.119 0.881 41 H 0.266 0.734 42 H 0.138 0.862 43 H 0.228 0.772 44 H -0.179 1.179 45 H -0.180 1.180 46 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.460 -0.624 0.759 2.649 hybrid contribution 0.935 0.944 -1.038 1.686 sum 3.395 0.320 -0.279 3.421 Atomic orbital electron populations 1.20415 0.88857 1.03498 1.02462 1.19938 0.96022 0.90276 1.00944 1.20136 0.83615 0.93342 1.19614 1.17084 0.85318 0.82893 0.76225 1.90825 1.15984 1.82847 1.49699 1.47370 1.08545 1.05769 1.71595 1.22395 0.82899 1.03272 1.01018 1.21950 1.00742 0.79239 0.96445 0.86733 1.23469 0.96880 1.00540 0.96760 1.21923 0.96891 0.93794 0.97416 0.88005 1.19678 0.93558 0.94463 0.99528 1.21026 0.99650 0.92271 1.00546 1.21190 0.95825 0.96914 0.99546 1.21209 0.93740 0.99167 1.00066 1.21186 0.99852 0.92725 0.99807 1.21050 0.94995 0.97027 1.00481 1.23563 0.97063 1.00020 0.97303 1.42924 1.07611 1.06663 1.56199 1.21100 0.96808 0.83763 1.07998 1.24902 0.91617 1.09198 0.91328 1.86587 1.42000 1.89546 1.16001 0.94212 0.82162 0.72439 0.89607 1.20612 0.90835 0.99080 1.11803 0.91403 0.91444 0.89820 0.92088 0.90655 0.88435 0.88445 0.90796 0.85951 0.85955 0.86045 0.86022 0.86267 0.90540 0.88060 0.73408 0.86248 0.77178 1.17869 1.18019 0.83260 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.18 9.91 36.01 0.36 0.17 16 2 C -0.06 -0.15 6.21 -104.16 -0.65 -0.80 16 3 C -0.05 -0.12 6.63 -81.98 -0.54 -0.67 16 4 C 0.59 1.90 7.63 -12.85 -0.10 1.80 16 5 O -0.52 -3.16 14.27 5.19 0.07 -3.09 16 6 N -0.60 -0.21 3.08 -174.54 -0.54 -0.75 16 7 C 0.05 -0.12 7.40 59.85 0.44 0.32 16 8 C 0.12 -0.01 4.47 -67.12 -0.30 -0.31 16 9 H 0.11 0.17 7.21 -51.93 -0.37 -0.21 16 10 C -0.14 0.12 7.20 -25.92 -0.19 -0.07 16 11 C -0.08 0.12 3.31 -90.82 -0.30 -0.18 16 12 H 0.10 -0.26 5.41 -51.93 -0.28 -0.54 16 13 C -0.07 0.00 5.29 -104.62 -0.55 -0.55 16 14 C -0.12 -0.02 8.63 -39.58 -0.34 -0.36 16 15 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 16 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 17 C -0.12 -0.05 10.05 -39.58 -0.40 -0.44 16 18 C -0.12 -0.02 9.71 -39.58 -0.38 -0.41 16 19 C -0.14 0.20 6.68 -25.77 -0.17 0.03 16 20 N -0.53 0.05 5.07 -5.70 -0.03 0.02 16 21 C 0.02 0.00 6.47 -81.96 -0.53 -0.54 16 22 C -0.06 0.09 3.08 36.00 0.11 0.21 16 23 O -0.53 0.29 12.88 -35.23 -0.45 -0.16 16 24 Si 0.72 -1.46 30.54 -169.99 -5.19 -6.65 16 25 C -0.20 -0.11 9.27 -39.98 -0.37 -0.48 16 26 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 27 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 28 H 0.08 0.30 6.37 -51.93 -0.33 -0.03 16 29 H 0.06 -0.23 7.49 -51.93 -0.39 -0.61 16 30 H 0.08 -0.20 5.62 -51.93 -0.29 -0.49 16 31 H 0.10 -0.35 4.52 -51.93 -0.23 -0.58 16 32 H 0.10 -0.09 7.73 -51.93 -0.40 -0.49 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 34 H 0.12 -0.16 6.65 -52.49 -0.35 -0.50 16 35 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 36 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 38 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 39 H 0.08 -0.10 7.45 -51.93 -0.39 -0.49 16 40 H 0.10 -0.18 6.31 -51.93 -0.33 -0.50 16 41 H 0.42 -0.84 4.93 -40.82 -0.20 -1.04 16 42 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 43 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 44 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 45 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 46 H 0.15 -0.21 6.17 -52.48 -0.32 -0.53 16 LS Contribution 361.25 15.07 5.44 5.44 Total: 0.00 -7.25 361.25 -11.47 -18.73 By element: Atomic # 1 Polarization: -4.32 SS G_CDS: -6.07 Total: -10.38 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -4.71 Total: -3.16 kcal Atomic # 7 Polarization: -0.16 SS G_CDS: -0.57 Total: -0.73 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.38 Total: -3.25 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.19 Total: -6.65 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -7.25 -11.47 -18.73 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.888 kcal (2) G-P(sol) polarization free energy of solvation -7.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.725 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds