Wall clock time and date at job start Tue Mar 9 2021 13:14:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.34775 * 119.99751 * 2 1 4 4 O 1.21285 * 119.99617 * 179.97438 * 3 2 1 5 5 C 1.50693 * 120.00472 * 0.02562 * 3 2 1 6 6 F 1.39903 * 109.47136 * 59.99936 * 5 3 2 7 7 F 1.39897 * 109.47292 * 299.99843 * 5 3 2 8 8 O 1.42900 * 109.47523 * 179.97438 * 5 3 2 9 9 C 1.35892 * 117.00484 * 179.97438 * 8 5 3 10 10 C 1.38732 * 120.05920 * 180.02562 * 9 8 5 11 11 C 1.38149 * 119.94758 * 179.97438 * 10 9 8 12 12 C 1.38269 * 120.05054 * 0.02562 * 11 10 9 13 13 C 1.50700 * 119.93900 * 179.97438 * 12 11 10 14 14 O 1.42896 * 109.47341 * 300.00123 * 13 12 11 15 15 Si 1.86300 * 109.46849 * 180.02562 * 13 12 11 16 16 C 1.38264 * 120.11486 * 0.27666 * 12 11 10 17 17 C 1.38143 * 120.05501 * 359.44957 * 16 12 11 18 18 C 1.46496 * 119.99609 * 179.97438 * 2 1 3 19 19 H 1.09008 * 112.84515 * 191.19491 * 18 2 1 20 20 C 1.53779 * 113.62024 * 322.50417 * 18 2 1 21 21 C 1.53784 * 87.07821 * 89.11731 * 20 18 2 22 22 H 1.09001 * 113.61431 * 270.88356 * 21 20 18 23 23 C 1.50703 * 113.69097 * 139.99669 * 21 20 18 24 24 C 1.38228 * 119.99562 * 322.19096 * 23 21 20 25 25 C 1.38238 * 119.99935 * 179.81593 * 24 23 21 26 26 C 1.38239 * 119.99678 * 0.38740 * 25 24 23 27 27 C 1.38238 * 119.99995 * 359.86095 * 26 25 24 28 28 C 1.38232 * 119.99890 * 359.96097 * 27 26 25 29 29 C 1.53779 * 87.08419 * 25.43370 * 21 20 18 30 30 H 1.08997 * 109.46910 * 89.99805 * 1 2 3 31 31 H 1.08997 * 109.47389 * 210.00293 * 1 2 3 32 32 H 1.09005 * 109.46834 * 330.00051 * 1 2 3 33 33 H 1.08000 * 120.02660 * 359.96129 * 10 9 8 34 34 H 1.08000 * 119.97348 * 180.02562 * 11 10 9 35 35 H 1.09000 * 109.46989 * 60.00454 * 13 12 11 36 36 H 0.96693 * 114.00306 * 299.99773 * 14 13 12 37 37 H 1.48506 * 110.00048 * 58.68772 * 15 13 12 38 38 H 1.48502 * 109.99996 * 180.02562 * 15 13 12 39 39 H 1.08003 * 119.97236 * 179.73093 * 16 12 11 40 40 H 1.08000 * 120.02735 * 180.28019 * 17 16 12 41 41 H 1.08995 * 113.61518 * 203.66338 * 20 18 2 42 42 H 1.08994 * 113.61024 * 334.57140 * 20 18 2 43 43 H 1.08000 * 120.00422 * 359.97438 * 24 23 21 44 44 H 1.07998 * 120.00410 * 180.22871 * 25 24 23 45 45 H 1.08001 * 119.99822 * 179.84128 * 26 25 24 46 46 H 1.08001 * 120.00057 * 179.97438 * 27 26 25 47 47 H 1.08003 * 120.00141 * 179.97438 * 28 27 26 48 48 H 1.08999 * 113.61602 * 220.02285 * 29 21 20 49 49 H 1.08993 * 113.61367 * 89.11623 * 29 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1672 0.0005 5 6 1.3855 2.4723 0.0006 6 9 0.5816 2.5462 1.1432 7 9 0.5807 2.5467 -1.1413 8 8 2.3140 3.5585 0.0011 9 6 1.7947 4.8142 0.0011 10 6 2.6387 5.9153 0.0010 11 6 2.1083 7.1909 0.0005 12 6 0.7373 7.3707 0.0006 13 6 0.1614 8.7633 0.0006 14 8 0.6019 9.4609 1.1673 15 14 -1.6991 8.6658 0.0015 16 6 -0.1060 6.2750 0.0070 17 6 0.4194 4.9974 0.0018 18 6 2.1974 -1.2687 0.0006 19 1 3.2625 -1.1425 0.1955 20 6 1.5373 -2.3608 0.8587 21 6 0.7441 -2.7580 -0.3975 22 1 -0.1983 -2.2212 -0.5066 23 6 0.5929 -4.2472 -0.5724 24 6 1.6375 -5.0911 -0.2449 25 6 1.4975 -6.4574 -0.4017 26 6 0.3156 -6.9791 -0.8937 27 6 -0.7272 -6.1347 -1.2261 28 6 -0.5884 -4.7687 -1.0657 29 6 1.8954 -2.1549 -1.2194 30 1 -0.3633 0.0000 -1.0276 31 1 -0.3634 -0.8899 0.5139 32 1 -0.3633 0.8900 0.5139 33 1 3.7096 5.7753 0.0016 34 1 2.7649 8.0483 0.0000 35 1 0.4972 9.2953 -0.8894 36 1 0.3381 9.0432 1.9985 37 1 -2.1678 7.9152 1.1941 38 1 -2.2793 10.0327 0.0009 39 1 -1.1765 6.4181 0.0114 40 1 -0.2397 4.1419 0.0022 41 1 2.2320 -3.1294 1.1975 42 1 0.9146 -1.9678 1.6622 43 1 2.5622 -4.6833 0.1360 44 1 2.3123 -7.1171 -0.1424 45 1 0.2072 -8.0463 -1.0187 46 1 -1.6504 -6.5422 -1.6108 47 1 -1.4030 -4.1090 -1.3258 48 1 1.5616 -1.5956 -2.0934 49 1 2.6879 -2.8672 -1.4487 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:17 Heat of formation + Delta-G solvation = -92.852438 kcal Electronic energy + Delta-G solvation = -36222.570842 eV Core-core repulsion = 31140.319704 eV Total energy + Delta-G solvation = -5082.251139 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.148 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.91060 -48.81492 -42.11435 -41.31940 -40.50591 -39.39803 -38.90149 -37.34052 -35.81158 -32.43555 -32.15302 -31.96802 -31.77202 -29.12556 -28.84693 -26.95897 -26.49916 -25.67109 -24.49843 -23.69258 -22.96158 -22.49695 -21.69582 -20.71664 -19.94791 -19.62717 -19.30546 -18.65140 -18.22436 -17.68846 -17.38126 -17.00400 -16.81760 -16.68445 -16.31227 -16.27352 -15.96481 -15.86802 -15.73662 -15.44956 -15.31459 -15.15664 -15.12819 -15.05190 -14.59487 -14.51879 -14.40239 -14.33074 -14.27485 -14.23312 -14.04348 -13.68083 -13.48781 -13.29683 -13.20067 -12.98392 -12.85048 -12.37190 -12.27446 -12.22959 -11.91941 -11.82907 -11.70860 -11.40459 -11.30614 -10.65586 -10.15353 -10.14335 -9.87192 -9.62246 -9.53443 -4.99957 0.06890 0.18618 0.36534 0.44642 0.46914 0.70161 1.24284 1.55750 1.72886 1.90538 1.93045 2.49000 2.51550 2.76156 3.20339 3.27525 3.32474 3.43554 3.52336 3.54074 3.64766 3.67420 3.73289 3.75295 3.88050 4.03901 4.05199 4.10043 4.14721 4.18612 4.21395 4.36799 4.38329 4.41281 4.47625 4.53596 4.54230 4.56446 4.59569 4.72545 4.80069 4.82519 4.89618 4.94212 5.03281 5.07679 5.07990 5.21361 5.36567 5.41547 5.52013 5.58891 5.63276 5.67273 5.88370 6.04284 6.33541 6.36576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.042 3.958 2 N -0.573 5.573 3 C 0.517 3.483 4 O -0.468 6.468 5 C 0.435 3.565 6 F -0.174 7.174 7 F -0.173 7.173 8 O -0.285 6.285 9 C 0.107 3.893 10 C -0.126 4.126 11 C -0.056 4.056 12 C -0.141 4.141 13 C -0.071 4.071 14 O -0.529 6.529 15 Si 0.681 3.319 16 C -0.077 4.077 17 C -0.187 4.187 18 C 0.115 3.885 19 H 0.118 0.882 20 C -0.139 4.139 21 C -0.082 4.082 22 H 0.105 0.895 23 C -0.073 4.073 24 C -0.117 4.117 25 C -0.117 4.117 26 C -0.123 4.123 27 C -0.117 4.117 28 C -0.116 4.116 29 C -0.136 4.136 30 H 0.074 0.926 31 H 0.097 0.903 32 H 0.082 0.918 33 H 0.141 0.859 34 H 0.140 0.860 35 H 0.121 0.879 36 H 0.376 0.624 37 H -0.260 1.260 38 H -0.255 1.255 39 H 0.135 0.865 40 H 0.136 0.864 41 H 0.105 0.895 42 H 0.080 0.920 43 H 0.122 0.878 44 H 0.122 0.878 45 H 0.121 0.879 46 H 0.122 0.878 47 H 0.121 0.879 48 H 0.078 0.922 49 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.756 -3.798 -1.220 5.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 N -0.307 5.307 3 C 0.297 3.703 4 O -0.338 6.338 5 C 0.358 3.642 6 F -0.155 7.155 7 F -0.154 7.154 8 O -0.202 6.202 9 C 0.064 3.936 10 C -0.145 4.145 11 C -0.074 4.074 12 C -0.141 4.141 13 C -0.181 4.181 14 O -0.335 6.335 15 Si 0.583 3.417 16 C -0.094 4.094 17 C -0.205 4.205 18 C 0.012 3.988 19 H 0.135 0.865 20 C -0.177 4.177 21 C -0.100 4.100 22 H 0.123 0.877 23 C -0.073 4.073 24 C -0.135 4.135 25 C -0.135 4.135 26 C -0.141 4.141 27 C -0.135 4.135 28 C -0.134 4.134 29 C -0.175 4.175 30 H 0.093 0.907 31 H 0.115 0.885 32 H 0.101 0.899 33 H 0.159 0.841 34 H 0.158 0.842 35 H 0.138 0.862 36 H 0.224 0.776 37 H -0.184 1.184 38 H -0.180 1.180 39 H 0.152 0.848 40 H 0.153 0.847 41 H 0.123 0.877 42 H 0.099 0.901 43 H 0.140 0.860 44 H 0.140 0.860 45 H 0.139 0.861 46 H 0.140 0.860 47 H 0.139 0.861 48 H 0.097 0.903 49 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -3.420 -3.242 -1.240 4.873 hybrid contribution -0.075 -0.081 1.042 1.048 sum -3.495 -3.323 -0.198 4.826 Atomic orbital electron populations 1.22530 0.78159 1.05475 1.03826 1.47346 1.07702 1.04334 1.71315 1.19331 0.87904 0.83260 0.79815 1.90863 1.11937 1.85190 1.45822 1.21746 0.78584 0.90221 0.73686 1.93136 1.74640 1.96408 1.51353 1.93188 1.74584 1.96578 1.51062 1.86675 1.32892 1.12297 1.88321 1.18997 0.92680 0.82823 0.99115 1.20543 1.00298 0.89634 1.03986 1.20898 0.94528 0.96176 0.95753 1.20319 0.94339 0.95514 1.03955 1.24985 1.11007 0.90829 0.91306 1.86602 1.78357 1.52860 1.15724 0.95060 0.74599 0.82534 0.89555 1.20800 0.99446 0.91366 0.97819 1.21457 0.93199 0.99322 1.06527 1.22156 0.97657 0.81014 0.97927 0.86452 1.23521 0.99813 0.97570 0.96805 1.21882 0.99077 0.92179 0.96867 0.87694 1.19644 0.94102 0.94453 0.99093 1.21013 0.98620 0.93369 1.00523 1.21187 0.97804 0.95272 0.99232 1.21216 0.93672 0.99979 0.99253 1.21191 0.99007 0.93591 0.99754 1.21061 0.97234 0.95355 0.99755 1.23476 0.98508 0.98327 0.97164 0.90700 0.88504 0.89909 0.84121 0.84214 0.86159 0.77583 1.18434 1.18016 0.84809 0.84675 0.87667 0.90113 0.85978 0.85974 0.86054 0.85998 0.86144 0.90331 0.88054 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.13 8.00 59.85 0.48 0.35 16 2 N -0.57 0.26 3.08 -173.00 -0.53 -0.27 16 3 C 0.52 1.25 7.24 -10.99 -0.08 1.17 16 4 O -0.47 -2.56 15.98 -14.36 -0.23 -2.79 16 5 C 0.44 0.86 1.42 36.00 0.05 0.91 16 6 F -0.17 -0.20 13.25 2.25 0.03 -0.17 16 7 F -0.17 -0.18 14.35 2.25 0.03 -0.14 16 8 O -0.29 -1.07 9.60 -39.31 -0.38 -1.45 16 9 C 0.11 0.28 6.48 -39.21 -0.25 0.03 16 10 C -0.13 -0.20 9.99 -39.43 -0.39 -0.59 16 11 C -0.06 -0.03 9.60 -39.60 -0.38 -0.41 16 12 C -0.14 -0.03 5.39 -104.60 -0.56 -0.59 16 13 C -0.07 0.03 2.82 36.01 0.10 0.13 16 14 O -0.53 -0.52 12.76 -35.23 -0.45 -0.97 16 15 Si 0.68 -0.75 29.78 -169.99 -5.06 -5.81 16 16 C -0.08 -0.01 8.66 -39.61 -0.34 -0.35 16 17 C -0.19 -0.25 8.26 -39.43 -0.33 -0.57 16 18 C 0.12 -0.14 4.46 -67.12 -0.30 -0.44 16 19 H 0.12 -0.02 7.23 -51.92 -0.38 -0.39 16 20 C -0.14 0.37 6.67 -25.92 -0.17 0.19 16 21 C -0.08 0.20 3.31 -90.96 -0.30 -0.10 16 22 H 0.11 -0.37 5.50 -51.93 -0.29 -0.65 16 23 C -0.07 0.06 5.29 -104.63 -0.55 -0.49 16 24 C -0.12 0.08 8.60 -39.58 -0.34 -0.26 16 25 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 26 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 27 C -0.12 0.02 10.05 -39.58 -0.40 -0.37 16 28 C -0.12 0.06 9.71 -39.59 -0.38 -0.32 16 29 C -0.14 0.27 7.21 -25.92 -0.19 0.08 16 30 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.10 -0.43 4.83 -51.93 -0.25 -0.68 16 32 H 0.08 -0.24 5.29 -51.93 -0.27 -0.51 16 33 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 34 H 0.14 -0.08 8.06 -52.49 -0.42 -0.50 16 35 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 36 H 0.38 -0.64 8.70 45.56 0.40 -0.25 16 37 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 38 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 39 H 0.13 -0.26 4.87 -52.48 -0.26 -0.51 16 40 H 0.14 0.06 5.10 -52.49 -0.27 -0.21 16 41 H 0.11 -0.32 6.33 -51.93 -0.33 -0.65 16 42 H 0.08 -0.22 7.36 -51.93 -0.38 -0.61 16 43 H 0.12 -0.27 6.68 -52.49 -0.35 -0.62 16 44 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 45 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 46 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 47 H 0.12 -0.26 8.05 -52.48 -0.42 -0.68 16 48 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 49 H 0.10 -0.22 7.71 -51.93 -0.40 -0.62 16 LS Contribution 398.48 15.07 6.01 6.01 Total: 0.00 -7.40 398.48 -11.49 -18.89 By element: Atomic # 1 Polarization: -5.13 SS G_CDS: -5.77 Total: -10.90 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -5.14 Total: -2.39 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -0.53 Total: -0.27 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -1.06 Total: -5.21 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.06 Total: -0.31 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.06 Total: -5.81 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -7.40 -11.49 -18.89 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.958 kcal (2) G-P(sol) polarization free energy of solvation -7.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.895 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds