Wall clock time and date at job start Tue Mar 9 2021 13:14:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.34775 * 119.99751 * 2 1 4 4 O 1.21285 * 119.99617 * 179.97438 * 3 2 1 5 5 C 1.50693 * 120.00472 * 0.02562 * 3 2 1 6 6 F 1.39903 * 109.47136 * 59.99936 * 5 3 2 7 7 F 1.39897 * 109.47292 * 299.99843 * 5 3 2 8 8 O 1.42900 * 109.47523 * 179.97438 * 5 3 2 9 9 C 1.35892 * 117.00484 * 179.97438 * 8 5 3 10 10 C 1.38732 * 120.05920 * 180.02562 * 9 8 5 11 11 C 1.38149 * 119.94758 * 179.97438 * 10 9 8 12 12 C 1.38269 * 120.05054 * 0.02562 * 11 10 9 13 13 C 1.50700 * 119.93900 * 179.97438 * 12 11 10 14 14 O 1.42896 * 109.47341 * 300.00123 * 13 12 11 15 15 Si 1.86300 * 109.46849 * 180.02562 * 13 12 11 16 16 C 1.38264 * 120.11486 * 0.27666 * 12 11 10 17 17 C 1.38143 * 120.05501 * 359.44957 * 16 12 11 18 18 C 1.46496 * 119.99609 * 179.97438 * 2 1 3 19 19 H 1.09008 * 112.84515 * 191.19491 * 18 2 1 20 20 C 1.53779 * 113.62024 * 322.50417 * 18 2 1 21 21 C 1.53784 * 87.07821 * 89.11731 * 20 18 2 22 22 H 1.09001 * 113.61431 * 270.88356 * 21 20 18 23 23 C 1.50703 * 113.69097 * 139.99669 * 21 20 18 24 24 C 1.38228 * 119.99562 * 322.19096 * 23 21 20 25 25 C 1.38238 * 119.99935 * 179.81593 * 24 23 21 26 26 C 1.38239 * 119.99678 * 0.38740 * 25 24 23 27 27 C 1.38238 * 119.99995 * 359.86095 * 26 25 24 28 28 C 1.38232 * 119.99890 * 359.96097 * 27 26 25 29 29 C 1.53779 * 87.08419 * 25.43370 * 21 20 18 30 30 H 1.08997 * 109.46910 * 89.99805 * 1 2 3 31 31 H 1.08997 * 109.47389 * 210.00293 * 1 2 3 32 32 H 1.09005 * 109.46834 * 330.00051 * 1 2 3 33 33 H 1.08000 * 120.02660 * 359.96129 * 10 9 8 34 34 H 1.08000 * 119.97348 * 180.02562 * 11 10 9 35 35 H 1.09000 * 109.46989 * 60.00454 * 13 12 11 36 36 H 0.96693 * 114.00306 * 299.99773 * 14 13 12 37 37 H 1.48506 * 110.00048 * 58.68772 * 15 13 12 38 38 H 1.48502 * 109.99996 * 180.02562 * 15 13 12 39 39 H 1.08003 * 119.97236 * 179.73093 * 16 12 11 40 40 H 1.08000 * 120.02735 * 180.28019 * 17 16 12 41 41 H 1.08995 * 113.61518 * 203.66338 * 20 18 2 42 42 H 1.08994 * 113.61024 * 334.57140 * 20 18 2 43 43 H 1.08000 * 120.00422 * 359.97438 * 24 23 21 44 44 H 1.07998 * 120.00410 * 180.22871 * 25 24 23 45 45 H 1.08001 * 119.99822 * 179.84128 * 26 25 24 46 46 H 1.08001 * 120.00057 * 179.97438 * 27 26 25 47 47 H 1.08003 * 120.00141 * 179.97438 * 28 27 26 48 48 H 1.08999 * 113.61602 * 220.02285 * 29 21 20 49 49 H 1.08993 * 113.61367 * 89.11623 * 29 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1672 0.0005 5 6 1.3855 2.4723 0.0006 6 9 0.5816 2.5462 1.1432 7 9 0.5807 2.5467 -1.1413 8 8 2.3140 3.5585 0.0011 9 6 1.7947 4.8142 0.0011 10 6 2.6387 5.9153 0.0010 11 6 2.1083 7.1909 0.0005 12 6 0.7373 7.3707 0.0006 13 6 0.1614 8.7633 0.0006 14 8 0.6019 9.4609 1.1673 15 14 -1.6991 8.6658 0.0015 16 6 -0.1060 6.2750 0.0070 17 6 0.4194 4.9974 0.0018 18 6 2.1974 -1.2687 0.0006 19 1 3.2625 -1.1425 0.1955 20 6 1.5373 -2.3608 0.8587 21 6 0.7441 -2.7580 -0.3975 22 1 -0.1983 -2.2212 -0.5066 23 6 0.5929 -4.2472 -0.5724 24 6 1.6375 -5.0911 -0.2449 25 6 1.4975 -6.4574 -0.4017 26 6 0.3156 -6.9791 -0.8937 27 6 -0.7272 -6.1347 -1.2261 28 6 -0.5884 -4.7687 -1.0657 29 6 1.8954 -2.1549 -1.2194 30 1 -0.3633 0.0000 -1.0276 31 1 -0.3634 -0.8899 0.5139 32 1 -0.3633 0.8900 0.5139 33 1 3.7096 5.7753 0.0016 34 1 2.7649 8.0483 0.0000 35 1 0.4972 9.2953 -0.8894 36 1 0.3381 9.0432 1.9985 37 1 -2.1678 7.9152 1.1941 38 1 -2.2793 10.0327 0.0009 39 1 -1.1765 6.4181 0.0114 40 1 -0.2397 4.1419 0.0022 41 1 2.2320 -3.1294 1.1975 42 1 0.9146 -1.9678 1.6622 43 1 2.5622 -4.6833 0.1360 44 1 2.3123 -7.1171 -0.1424 45 1 0.2072 -8.0463 -1.0187 46 1 -1.6504 -6.5422 -1.6108 47 1 -1.4030 -4.1090 -1.3258 48 1 1.5616 -1.5956 -2.0934 49 1 2.6879 -2.8672 -1.4487 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:16 Heat of formation + Delta-G solvation = -86.068201 kcal Electronic energy + Delta-G solvation = -36222.276656 eV Core-core repulsion = 31140.319704 eV Total energy + Delta-G solvation = -5081.956952 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.148 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -51.01624 -48.91291 -42.07439 -41.39951 -40.52625 -39.43098 -38.90840 -37.38436 -35.80318 -32.48056 -32.11944 -31.94712 -31.67952 -29.20365 -28.71022 -26.80092 -26.50245 -25.62092 -24.51715 -23.61320 -22.95937 -22.52500 -21.64514 -20.77654 -19.89997 -19.74517 -19.36345 -18.66375 -18.19359 -17.67651 -17.40730 -16.99334 -16.84667 -16.68830 -16.31115 -16.17346 -15.96589 -15.88421 -15.80047 -15.48368 -15.41144 -15.19041 -15.14996 -15.02134 -14.56795 -14.53458 -14.44733 -14.30004 -14.25671 -14.16034 -13.97864 -13.55703 -13.52452 -13.11157 -13.06765 -13.05054 -12.74817 -12.43046 -12.27088 -12.15150 -11.84425 -11.75232 -11.70231 -11.39684 -11.22569 -10.65639 -10.19683 -10.11126 -9.78910 -9.61076 -9.53287 -4.92967 -0.00068 0.14500 0.39464 0.44681 0.52791 0.56576 1.29654 1.59185 1.64023 1.83245 1.95366 2.43943 2.46601 2.85049 3.18160 3.33839 3.38540 3.52841 3.56163 3.63303 3.67284 3.70614 3.85890 3.91648 4.03298 4.07800 4.17455 4.19058 4.20726 4.31935 4.38201 4.38909 4.49915 4.54648 4.58603 4.64582 4.70823 4.72113 4.74937 4.81866 4.84224 4.89570 4.95569 5.03103 5.04786 5.14974 5.19684 5.32050 5.33124 5.38630 5.61132 5.65986 5.67433 5.75293 5.82147 6.15138 6.26101 6.47347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 N -0.562 5.562 3 C 0.511 3.489 4 O -0.510 6.510 5 C 0.440 3.560 6 F -0.169 7.169 7 F -0.167 7.167 8 O -0.306 6.306 9 C 0.084 3.916 10 C -0.136 4.136 11 C -0.058 4.058 12 C -0.139 4.139 13 C -0.078 4.078 14 O -0.547 6.547 15 Si 0.762 3.238 16 C -0.076 4.076 17 C -0.192 4.192 18 C 0.107 3.893 19 H 0.102 0.898 20 C -0.131 4.131 21 C -0.074 4.074 22 H 0.120 0.880 23 C -0.078 4.078 24 C -0.126 4.126 25 C -0.131 4.131 26 C -0.139 4.139 27 C -0.131 4.131 28 C -0.126 4.126 29 C -0.132 4.132 30 H 0.089 0.911 31 H 0.116 0.884 32 H 0.083 0.917 33 H 0.144 0.856 34 H 0.150 0.850 35 H 0.130 0.870 36 H 0.386 0.614 37 H -0.281 1.281 38 H -0.301 1.301 39 H 0.155 0.845 40 H 0.142 0.858 41 H 0.110 0.890 42 H 0.087 0.913 43 H 0.134 0.866 44 H 0.131 0.869 45 H 0.129 0.871 46 H 0.132 0.868 47 H 0.136 0.864 48 H 0.075 0.925 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.106 -3.913 -1.333 6.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 N -0.294 5.294 3 C 0.292 3.708 4 O -0.385 6.385 5 C 0.362 3.638 6 F -0.151 7.151 7 F -0.149 7.149 8 O -0.223 6.223 9 C 0.042 3.958 10 C -0.155 4.155 11 C -0.075 4.075 12 C -0.139 4.139 13 C -0.187 4.187 14 O -0.355 6.355 15 Si 0.667 3.333 16 C -0.094 4.094 17 C -0.211 4.211 18 C 0.004 3.996 19 H 0.120 0.880 20 C -0.168 4.168 21 C -0.091 4.091 22 H 0.137 0.863 23 C -0.078 4.078 24 C -0.144 4.144 25 C -0.149 4.149 26 C -0.157 4.157 27 C -0.149 4.149 28 C -0.144 4.144 29 C -0.170 4.170 30 H 0.107 0.893 31 H 0.134 0.866 32 H 0.102 0.898 33 H 0.161 0.839 34 H 0.168 0.832 35 H 0.148 0.852 36 H 0.236 0.764 37 H -0.208 1.208 38 H -0.229 1.229 39 H 0.172 0.828 40 H 0.160 0.840 41 H 0.128 0.872 42 H 0.105 0.895 43 H 0.151 0.849 44 H 0.149 0.851 45 H 0.147 0.853 46 H 0.150 0.850 47 H 0.154 0.846 48 H 0.094 0.906 49 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -4.790 -3.395 -1.357 6.026 hybrid contribution 0.311 -0.029 1.091 1.134 sum -4.479 -3.424 -0.267 5.644 Atomic orbital electron populations 1.22793 0.76381 1.06495 1.05090 1.47486 1.08796 1.03726 1.69430 1.19526 0.87581 0.84013 0.79707 1.90835 1.13540 1.85778 1.48305 1.21613 0.78514 0.89730 0.73956 1.93139 1.74424 1.96383 1.51137 1.93191 1.74337 1.96536 1.50786 1.86649 1.33975 1.13032 1.88635 1.19269 0.93522 0.82655 1.00382 1.20703 1.00590 0.89922 1.04275 1.21053 0.95040 0.96044 0.95406 1.20433 0.94234 0.95894 1.03350 1.25189 1.11689 0.90434 0.91371 1.86576 1.78789 1.53511 1.16622 0.94143 0.72344 0.79103 0.87681 1.21030 1.00513 0.90804 0.97022 1.21600 0.92782 1.00149 1.06523 1.22248 0.97122 0.81004 0.99188 0.88004 1.23499 0.99726 0.96818 0.96785 1.21882 0.99442 0.91340 0.96483 0.86268 1.19819 0.93971 0.95165 0.98812 1.21238 0.99275 0.93400 1.00509 1.21421 0.98191 0.95842 0.99470 1.21443 0.93969 1.00663 0.99585 1.21434 0.99498 0.94002 0.99966 1.21328 0.97869 0.95565 0.99652 1.23442 0.98842 0.98011 0.96714 0.89301 0.86597 0.89820 0.83866 0.83225 0.85182 0.76429 1.20791 1.22941 0.82768 0.83995 0.87163 0.89464 0.84854 0.85081 0.85255 0.84971 0.84633 0.90617 0.87972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.23 8.00 127.77 1.02 0.79 16 2 N -0.56 0.45 3.08 -819.64 -2.53 -2.08 16 3 C 0.51 3.04 7.24 87.66 0.63 3.67 16 4 O -0.51 -6.69 15.98 15.99 0.26 -6.43 16 5 C 0.44 2.07 1.42 71.23 0.10 2.18 16 6 F -0.17 -0.42 13.25 44.97 0.60 0.17 16 7 F -0.17 -0.37 14.35 44.97 0.65 0.28 16 8 O -0.31 -2.76 9.60 -73.30 -0.70 -3.46 16 9 C 0.08 0.52 6.48 22.51 0.15 0.66 16 10 C -0.14 -0.54 9.99 22.37 0.22 -0.32 16 11 C -0.06 -0.07 9.60 22.26 0.21 0.14 16 12 C -0.14 0.02 5.39 -19.85 -0.11 -0.09 16 13 C -0.08 0.13 2.82 71.24 0.20 0.33 16 14 O -0.55 -0.81 12.76 -148.98 -1.90 -2.71 16 15 Si 0.76 -2.21 29.78 68.60 2.04 -0.17 16 16 C -0.08 0.04 8.66 22.25 0.19 0.23 16 17 C -0.19 -0.50 8.26 22.37 0.18 -0.32 16 18 C 0.11 -0.24 4.46 45.52 0.20 -0.04 16 19 H 0.10 0.12 7.23 -2.38 -0.02 0.11 16 20 C -0.13 0.78 6.67 31.12 0.21 0.99 16 21 C -0.07 0.45 3.31 -11.01 -0.04 0.41 16 22 H 0.12 -1.07 5.50 -2.39 -0.01 -1.08 16 23 C -0.08 0.19 5.29 -19.87 -0.11 0.08 16 24 C -0.13 0.20 8.60 22.27 0.19 0.39 16 25 C -0.13 0.05 10.05 22.27 0.22 0.27 16 26 C -0.14 0.00 10.05 22.27 0.22 0.22 16 27 C -0.13 0.08 10.05 22.27 0.22 0.30 16 28 C -0.13 0.22 9.71 22.27 0.22 0.44 16 29 C -0.13 0.55 7.21 31.12 0.22 0.78 16 30 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 31 H 0.12 -1.25 4.83 -2.39 -0.01 -1.26 16 32 H 0.08 -0.55 5.29 -2.38 -0.01 -0.57 16 33 H 0.14 0.35 8.06 -2.91 -0.02 0.33 16 34 H 0.15 -0.19 8.06 -2.91 -0.02 -0.22 16 35 H 0.13 -0.47 7.96 -2.39 -0.02 -0.49 16 36 H 0.39 -1.47 8.70 -74.06 -0.64 -2.11 16 37 H -0.28 -0.22 7.11 99.48 0.71 0.48 16 38 H -0.30 -1.49 7.11 99.48 0.71 -0.78 16 39 H 0.16 -0.83 4.87 -2.91 -0.01 -0.84 16 40 H 0.14 0.07 5.10 -2.91 -0.01 0.06 16 41 H 0.11 -0.74 6.33 -2.39 -0.02 -0.76 16 42 H 0.09 -0.60 7.36 -2.39 -0.02 -0.61 16 43 H 0.13 -0.63 6.68 -2.91 -0.02 -0.65 16 44 H 0.13 -0.42 8.06 -2.91 -0.02 -0.44 16 45 H 0.13 -0.35 8.06 -2.91 -0.02 -0.37 16 46 H 0.13 -0.48 8.06 -2.91 -0.02 -0.51 16 47 H 0.14 -0.76 8.05 -2.91 -0.02 -0.78 16 48 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 49 H 0.10 -0.43 7.71 -2.39 -0.02 -0.45 16 Total: 0.00 -18.52 398.48 3.21 -15.31 By element: Atomic # 1 Polarization: -12.46 SS G_CDS: 0.42 Total: -12.04 kcal Atomic # 6 Polarization: 6.75 SS G_CDS: 4.39 Total: 11.14 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -2.53 Total: -2.08 kcal Atomic # 8 Polarization: -10.26 SS G_CDS: -2.35 Total: -12.61 kcal Atomic # 9 Polarization: -0.79 SS G_CDS: 1.24 Total: 0.45 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: 2.04 Total: -0.17 kcal Total: -18.52 3.21 -15.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.758 kcal (2) G-P(sol) polarization free energy of solvation -18.519 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.310 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.068 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds