Wall clock time and date at job start Tue Mar 9 2021 13:14:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35989 * 117.00145 * 2 1 4 4 C 1.38677 * 119.99942 * 179.97438 * 3 2 1 5 5 C 1.38153 * 119.99611 * 180.02562 * 4 3 2 6 6 C 1.50701 * 119.99958 * 179.97438 * 5 4 3 7 7 O 1.42902 * 109.47361 * 105.01979 * 6 5 4 8 8 Si 1.86305 * 109.46963 * 345.02532 * 6 5 4 9 9 C 1.38671 * 120.00489 * 359.97438 * 5 4 3 10 10 O 1.35980 * 120.00651 * 180.02562 * 9 5 4 11 11 C 1.42894 * 117.00225 * 180.02562 * 10 9 5 12 12 C 1.50706 * 109.47263 * 179.97438 * 11 10 9 13 13 O 1.21283 * 119.99503 * 359.97438 * 12 11 10 14 14 N 1.34773 * 120.00081 * 179.72605 * 12 11 10 15 15 C 1.46492 * 120.00231 * 359.97438 * 14 12 11 16 16 C 1.46506 * 119.99968 * 180.02562 * 14 12 11 17 17 H 1.08999 * 112.84534 * 11.19124 * 16 14 12 18 18 C 1.53780 * 113.61598 * 142.49891 * 16 14 12 19 19 C 1.53785 * 87.07820 * 89.11340 * 18 16 14 20 20 H 1.08996 * 113.61406 * 270.87990 * 19 18 16 21 21 C 1.50699 * 113.60900 * 139.97832 * 19 18 16 22 22 C 1.38232 * 120.00684 * 322.23024 * 21 19 18 23 23 C 1.38235 * 120.00458 * 179.76685 * 22 21 19 24 24 C 1.38230 * 119.99741 * 0.50744 * 23 22 21 25 25 C 1.38236 * 120.00117 * 359.74241 * 24 23 22 26 26 C 1.38236 * 119.99999 * 0.02562 * 25 24 23 27 27 C 1.53778 * 87.08123 * 25.43336 * 19 18 16 28 28 C 1.38729 * 119.99585 * 0.27816 * 9 5 4 29 29 C 1.38105 * 120.00042 * 359.44858 * 28 9 5 30 30 H 1.08999 * 109.47129 * 180.02562 * 1 2 3 31 31 H 1.09009 * 109.46895 * 299.99928 * 1 2 3 32 32 H 1.08996 * 109.47045 * 59.99702 * 1 2 3 33 33 H 1.07996 * 119.99948 * 0.04607 * 4 3 2 34 34 H 1.08993 * 109.47664 * 225.02300 * 6 5 4 35 35 H 0.96701 * 113.99818 * 59.99825 * 7 6 5 36 36 H 1.48504 * 109.99744 * 178.68077 * 8 6 5 37 37 H 1.48506 * 109.99693 * 299.99673 * 8 6 5 38 38 H 1.09001 * 109.47678 * 60.00189 * 11 10 9 39 39 H 1.08998 * 109.47532 * 300.00134 * 11 10 9 40 40 H 1.09001 * 109.47443 * 89.99785 * 15 14 12 41 41 H 1.08999 * 109.47479 * 210.00762 * 15 14 12 42 42 H 1.09006 * 109.47080 * 330.00171 * 15 14 12 43 43 H 1.08996 * 113.61081 * 203.66233 * 18 16 14 44 44 H 1.09003 * 113.61224 * 334.56803 * 18 16 14 45 45 H 1.08008 * 119.99407 * 0.02562 * 22 21 19 46 46 H 1.08002 * 119.99922 * 180.23181 * 23 22 21 47 47 H 1.07998 * 120.00401 * 179.72825 * 24 23 22 48 48 H 1.08006 * 120.00138 * 179.97438 * 25 24 23 49 49 H 1.07997 * 120.00131 * 179.97438 * 26 25 24 50 50 H 1.09003 * 113.61624 * 220.01587 * 27 19 18 51 51 H 1.09005 * 113.69199 * 89.12737 * 27 19 18 52 52 H 1.08002 * 119.99689 * 179.69876 * 28 9 5 53 53 H 1.07997 * 120.00349 * 180.25437 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4312 1.2842 0.0005 5 6 4.0584 2.5151 0.0011 6 6 5.5633 2.5941 0.0022 7 8 6.0218 2.9677 -1.2986 8 14 6.2720 0.9320 0.4566 9 6 3.3032 3.6782 0.0005 10 8 3.9205 4.8898 0.0005 11 6 3.0805 6.0458 0.0005 12 6 3.9347 7.2875 0.0012 13 8 5.1437 7.1916 0.0021 14 7 3.3551 8.5042 -0.0043 15 6 1.8948 8.6198 -0.0114 16 6 4.1855 9.7111 -0.0042 17 1 5.2379 9.5008 -0.1945 18 6 3.6171 10.8500 -0.8673 19 6 2.8526 11.3114 0.3848 20 1 1.8704 10.8509 0.4910 21 6 2.8202 12.8084 0.5547 22 6 3.9298 13.5654 0.2284 23 6 3.8984 14.9390 0.3797 24 6 2.7608 15.5548 0.8671 25 6 1.6528 14.7974 1.1983 26 6 1.6827 13.4242 1.0425 27 6 3.9494 10.6212 1.2127 28 6 1.9178 3.6056 0.0053 29 6 1.2908 2.3751 -0.0009 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8901 32 1 -0.3633 0.5139 -0.8899 33 1 4.0194 0.3784 0.0002 34 1 5.8877 3.3384 0.7294 35 1 5.6914 3.8248 -1.6010 36 1 7.7557 0.9881 0.4303 37 1 5.8027 0.5320 1.8076 38 1 2.4513 6.0378 0.8905 39 1 2.4512 6.0378 -0.8894 40 1 1.5277 8.6508 1.0144 41 1 1.6052 9.5345 -0.5288 42 1 1.4647 7.7601 -0.5254 43 1 4.3717 11.5605 -1.2046 44 1 2.9684 10.5055 -1.6727 45 1 4.8201 13.0838 -0.1487 46 1 4.7642 15.5307 0.1212 47 1 2.7377 16.6276 0.9895 48 1 0.7642 15.2784 1.5795 49 1 0.8172 12.8324 1.3016 50 1 3.5691 10.0919 2.0864 51 1 4.7954 11.2681 1.4448 52 1 1.3297 4.5114 0.0098 53 1 0.2123 2.3185 -0.0014 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:28 Heat of formation + Delta-G solvation = -35.105632 kcal Electronic energy + Delta-G solvation = -34884.865098 eV Core-core repulsion = 30269.806189 eV Total energy + Delta-G solvation = -4615.058909 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.09261 -41.63662 -40.54283 -39.84546 -38.87478 -38.07533 -36.93558 -35.59372 -32.82935 -32.09657 -31.74607 -30.97227 -29.43735 -28.45674 -27.95976 -26.76706 -26.60150 -25.68588 -23.95999 -23.48106 -22.45320 -22.36343 -21.14094 -19.78183 -19.49926 -18.87021 -18.38857 -18.16585 -17.87736 -17.63712 -17.42871 -17.12277 -16.63743 -16.24267 -16.21255 -16.02674 -15.89790 -15.63399 -15.45544 -15.29619 -15.00153 -14.60893 -14.43973 -14.31821 -14.20682 -14.10542 -14.09545 -13.86862 -13.57523 -13.51134 -13.46006 -13.09708 -13.03397 -12.98837 -12.71838 -12.52926 -12.31012 -12.13056 -12.03551 -11.73664 -11.65697 -11.45257 -11.31753 -11.24453 -11.21313 -10.92034 -10.10404 -9.84287 -9.79967 -9.54009 -8.83056 -4.94696 0.05946 0.32567 0.42628 0.49945 1.31081 1.33107 1.33609 1.56885 1.90545 2.31464 2.41258 2.54234 2.82761 3.24136 3.43457 3.52101 3.62832 3.68422 3.71666 3.81966 3.85778 3.92187 3.98537 4.02052 4.08365 4.11094 4.14374 4.17509 4.20327 4.21666 4.27038 4.30077 4.45360 4.45807 4.52326 4.58470 4.61319 4.66042 4.69648 4.70883 4.79708 4.80520 4.83874 4.90264 4.95582 4.96827 5.11651 5.13289 5.16016 5.17277 5.20099 5.40186 5.50230 5.58620 5.64460 5.74182 6.07033 6.12500 6.22859 6.44163 6.50198 6.94185 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.118 4.118 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.088 3.912 10 O -0.317 6.317 11 C 0.042 3.958 12 C 0.512 3.488 13 O -0.571 6.571 14 N -0.588 5.588 15 C 0.048 3.952 16 C 0.112 3.888 17 H 0.083 0.917 18 C -0.132 4.132 19 C -0.068 4.068 20 H 0.123 0.877 21 C -0.079 4.079 22 C -0.129 4.129 23 C -0.132 4.132 24 C -0.138 4.138 25 C -0.130 4.130 26 C -0.125 4.125 27 C -0.135 4.135 28 C -0.159 4.159 29 C -0.160 4.160 30 H 0.114 0.886 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.152 0.848 34 H 0.060 0.940 35 H 0.371 0.629 36 H -0.295 1.295 37 H -0.264 1.264 38 H 0.121 0.879 39 H 0.127 0.873 40 H 0.079 0.921 41 H 0.097 0.903 42 H 0.097 0.903 43 H 0.099 0.901 44 H 0.087 0.913 45 H 0.128 0.872 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.134 0.866 49 H 0.138 0.862 50 H 0.072 0.928 51 H 0.089 0.911 52 H 0.167 0.833 53 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.729 2.146 -0.639 11.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.120 4.120 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.231 6.231 11 C -0.035 4.035 12 C 0.300 3.700 13 O -0.449 6.449 14 N -0.321 5.321 15 C -0.093 4.093 16 C 0.007 3.993 17 H 0.101 0.899 18 C -0.170 4.170 19 C -0.086 4.086 20 H 0.141 0.859 21 C -0.079 4.079 22 C -0.147 4.147 23 C -0.150 4.150 24 C -0.156 4.156 25 C -0.148 4.148 26 C -0.143 4.143 27 C -0.174 4.174 28 C -0.177 4.177 29 C -0.179 4.179 30 H 0.132 0.868 31 H 0.085 0.915 32 H 0.086 0.914 33 H 0.169 0.831 34 H 0.078 0.922 35 H 0.220 0.780 36 H -0.222 1.222 37 H -0.189 1.189 38 H 0.139 0.861 39 H 0.144 0.856 40 H 0.097 0.903 41 H 0.115 0.885 42 H 0.116 0.884 43 H 0.117 0.883 44 H 0.105 0.895 45 H 0.146 0.854 46 H 0.148 0.852 47 H 0.148 0.852 48 H 0.152 0.848 49 H 0.156 0.844 50 H 0.090 0.910 51 H 0.108 0.892 52 H 0.185 0.815 53 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -10.049 0.945 -0.042 10.093 hybrid contribution -0.222 2.255 0.477 2.315 sum -10.270 3.200 0.434 10.766 Atomic orbital electron populations 1.23361 0.76356 1.05631 1.02390 1.86090 1.23417 1.26290 1.88916 1.18977 0.91906 0.85390 0.99126 1.20179 0.92477 0.96735 1.04256 1.19444 0.95964 0.91021 1.05528 1.25525 0.92922 1.12502 0.87988 1.86659 1.74188 1.42201 1.32048 0.92237 0.76211 0.78966 0.81281 1.18812 0.91816 0.84155 1.00864 1.86082 1.35616 1.11964 1.89458 1.22741 0.92488 0.81772 1.06533 1.20582 0.88199 0.85257 0.75955 1.90757 1.16734 1.87019 1.50433 1.47461 1.08509 1.03776 1.72344 1.22490 0.76783 1.05801 1.04186 1.21934 0.95395 0.83921 0.98001 0.89882 1.23448 1.00380 0.96291 0.96847 1.21841 0.99962 0.90426 0.96337 0.85901 1.19879 0.93879 0.95425 0.98729 1.21225 0.98737 0.94029 1.00697 1.21410 0.98809 0.95198 0.99571 1.21441 0.93798 1.00818 0.99580 1.21453 0.99003 0.94487 0.99867 1.21334 0.98410 0.94955 0.99617 1.23409 0.99259 0.97641 0.97072 1.21363 0.91958 1.00052 1.04332 1.21422 1.01629 0.90852 1.03972 0.86750 0.91527 0.91356 0.83063 0.92199 0.78023 1.22224 1.18934 0.86130 0.85585 0.90292 0.88452 0.88408 0.88317 0.89479 0.85373 0.85194 0.85150 0.84764 0.84407 0.90964 0.89234 0.81532 0.81995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.62 10.50 -93.42 -0.98 -1.60 16 3 C 0.09 0.22 6.69 22.49 0.15 0.37 16 4 C -0.12 -0.52 8.59 22.35 0.19 -0.33 16 5 C -0.12 -0.74 5.28 -19.78 -0.10 -0.84 16 6 C -0.08 -0.71 2.33 71.24 0.17 -0.54 16 7 O -0.54 -5.67 12.65 -148.98 -1.89 -7.56 16 8 Si 0.81 4.63 30.17 68.60 2.07 6.70 16 9 C 0.09 0.32 6.62 22.49 0.15 0.47 16 10 O -0.32 -1.64 8.56 -74.29 -0.64 -2.28 16 11 C 0.04 -0.14 3.78 71.24 0.27 0.13 16 12 C 0.51 1.77 7.75 87.66 0.68 2.45 16 13 O -0.57 -8.50 15.98 16.00 0.26 -8.24 16 14 N -0.59 1.60 3.08 -819.65 -2.53 -0.93 16 15 C 0.05 -0.57 8.65 127.77 1.11 0.54 16 16 C 0.11 -0.07 4.46 45.52 0.20 0.14 16 17 H 0.08 0.45 7.23 -2.39 -0.02 0.43 16 18 C -0.13 0.59 6.67 31.12 0.21 0.79 16 19 C -0.07 0.35 3.31 -11.01 -0.04 0.31 16 20 H 0.12 -1.12 5.50 -2.39 -0.01 -1.13 16 21 C -0.08 0.10 5.29 -19.87 -0.11 0.00 16 22 C -0.13 -0.01 8.60 22.27 0.19 0.18 16 23 C -0.13 -0.11 10.05 22.27 0.22 0.11 16 24 C -0.14 -0.09 10.05 22.27 0.22 0.13 16 25 C -0.13 0.04 10.05 22.27 0.22 0.26 16 26 C -0.13 0.18 9.71 22.27 0.22 0.39 16 27 C -0.14 0.30 7.21 31.12 0.22 0.52 16 28 C -0.16 0.42 9.03 22.36 0.20 0.62 16 29 C -0.16 0.37 9.03 22.35 0.20 0.57 16 30 H 0.11 -1.00 8.14 -2.39 -0.02 -1.02 16 31 H 0.07 -0.56 7.66 -2.38 -0.02 -0.58 16 32 H 0.07 -0.59 7.66 -2.39 -0.02 -0.61 16 33 H 0.15 0.25 5.13 -2.91 -0.01 0.24 16 34 H 0.06 0.68 7.82 -2.39 -0.02 0.66 16 35 H 0.37 2.98 8.59 -74.06 -0.64 2.35 16 36 H -0.29 -3.56 7.11 99.48 0.71 -2.85 16 37 H -0.26 -1.99 7.11 99.48 0.71 -1.28 16 38 H 0.12 -1.09 7.62 -2.39 -0.02 -1.11 16 39 H 0.13 -1.26 6.91 -2.39 -0.02 -1.28 16 40 H 0.08 -1.09 8.14 -2.39 -0.02 -1.11 16 41 H 0.10 -1.28 4.83 -2.39 -0.01 -1.29 16 42 H 0.10 -1.59 6.43 -2.38 -0.02 -1.61 16 43 H 0.10 -0.38 6.32 -2.39 -0.02 -0.40 16 44 H 0.09 -0.53 7.36 -2.39 -0.02 -0.55 16 45 H 0.13 -0.27 6.67 -2.91 -0.02 -0.29 16 46 H 0.13 -0.24 8.06 -2.91 -0.02 -0.26 16 47 H 0.13 -0.29 8.06 -2.91 -0.02 -0.32 16 48 H 0.13 -0.50 8.06 -2.91 -0.02 -0.52 16 49 H 0.14 -0.79 8.06 -2.91 -0.02 -0.82 16 50 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 51 H 0.09 -0.08 7.72 -2.38 -0.02 -0.09 16 52 H 0.17 -1.74 6.29 -2.91 -0.02 -1.76 16 53 H 0.16 -1.34 6.29 -2.91 -0.02 -1.36 16 Total: 0.00 -25.67 420.81 2.35 -23.32 By element: Atomic # 1 Polarization: -17.05 SS G_CDS: 0.36 Total: -16.69 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: 5.69 Total: 7.28 kcal Atomic # 7 Polarization: 1.60 SS G_CDS: -2.53 Total: -0.93 kcal Atomic # 8 Polarization: -16.44 SS G_CDS: -3.25 Total: -19.68 kcal Atomic # 14 Polarization: 4.63 SS G_CDS: 2.07 Total: 6.70 kcal Total: -25.67 2.35 -23.32 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.782 kcal (2) G-P(sol) polarization free energy of solvation -25.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.106 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds