Wall clock time and date at job start Tue Mar 9 2021 13:15:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36770 * 125.80067 * 2 1 4 4 C 1.47260 * 126.94281 * 0.02562 * 3 2 1 5 5 O 1.21629 * 119.99918 * 353.32025 * 4 3 2 6 6 N 1.34778 * 120.00275 * 173.31715 * 4 3 2 7 7 C 1.46506 * 119.99585 * 3.67139 * 6 4 3 8 8 C 1.46492 * 120.00289 * 183.67423 * 6 4 3 9 9 H 1.09004 * 112.85294 * 19.50193 * 8 6 4 10 10 C 1.53783 * 113.61662 * 150.69677 * 8 6 4 11 11 C 1.54049 * 86.98624 * 89.15980 * 10 8 6 12 12 H 1.09006 * 113.69117 * 270.87579 * 11 10 8 13 13 C 1.50705 * 113.61974 * 139.98167 * 11 10 8 14 14 C 1.38235 * 119.99714 * 322.23339 * 13 11 10 15 15 C 1.38232 * 119.99737 * 179.78983 * 14 13 11 16 16 C 1.38233 * 120.00021 * 0.46248 * 15 14 13 17 17 C 1.38236 * 119.99954 * 359.76603 * 16 15 14 18 18 C 1.38232 * 119.99856 * 142.50513 * 13 11 10 19 19 C 1.53782 * 113.61616 * 248.30364 * 8 6 4 20 20 C 1.46686 * 106.11389 * 180.27879 * 3 2 1 21 21 C 1.34485 * 106.33325 * 359.56768 * 20 3 2 22 22 C 1.50698 * 125.57290 * 180.11190 * 21 20 3 23 23 O 1.42905 * 109.46969 * 300.35159 * 22 21 20 24 24 Si 1.86309 * 109.47150 * 180.35484 * 22 21 20 25 25 N 1.34651 * 125.80108 * 180.02562 * 2 1 3 26 26 H 1.09006 * 109.47054 * 90.00190 * 1 2 3 27 27 H 1.09000 * 109.47532 * 210.00124 * 1 2 3 28 28 H 1.09006 * 109.47453 * 330.00446 * 1 2 3 29 29 H 1.08997 * 109.47030 * 66.16761 * 7 6 4 30 30 H 1.09004 * 109.46724 * 186.17264 * 7 6 4 31 31 H 1.09000 * 109.46967 * 306.16750 * 7 6 4 32 32 H 1.09004 * 113.61636 * 203.66730 * 10 8 6 33 33 H 1.08999 * 113.61330 * 334.56548 * 10 8 6 34 34 H 1.08001 * 120.00363 * 359.97438 * 14 13 11 35 35 H 1.08000 * 119.99816 * 180.24737 * 15 14 13 36 36 H 1.08004 * 119.99873 * 179.78883 * 16 15 14 37 37 H 1.08002 * 119.99660 * 180.02562 * 17 16 15 38 38 H 1.08003 * 120.00489 * 359.97438 * 18 13 11 39 39 H 1.09007 * 113.60954 * 25.42953 * 19 8 6 40 40 H 1.08994 * 113.61731 * 156.25337 * 19 8 6 41 41 H 1.07997 * 126.83572 * 179.73864 * 20 3 2 42 42 H 1.08994 * 109.47334 * 60.35310 * 22 21 20 43 43 H 0.96701 * 113.99646 * 179.97438 * 23 22 21 44 44 H 1.48501 * 109.99560 * 298.67809 * 24 22 21 45 45 H 1.48497 * 110.00087 * 59.99649 * 24 22 21 46 46 H 0.96999 * 124.85430 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 0.0005 5 8 0.6907 2.7860 -0.1215 6 7 2.7774 3.5031 0.1363 7 6 4.2053 3.1819 0.2025 8 6 2.3358 4.8974 0.2177 9 1 1.2860 4.9935 0.4951 10 6 3.2750 5.7941 1.0415 11 6 4.0406 6.0573 -0.2691 12 1 4.8359 5.3377 -0.4639 13 6 4.4928 7.4862 -0.4277 14 6 3.6798 8.5197 -0.0013 15 6 4.0963 9.8301 -0.1429 16 6 5.3217 10.1074 -0.7195 17 6 6.1326 9.0741 -1.1502 18 6 5.7179 7.7634 -1.0047 19 6 2.7290 5.7407 -1.0067 20 6 3.6882 0.6151 -0.0069 21 6 3.6096 -0.7274 -0.0006 22 6 4.7819 -1.6742 -0.0018 23 8 5.5750 -1.4490 -1.1691 24 14 4.1614 -3.4310 -0.0022 25 7 2.2947 -1.0921 -0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3634 0.8901 0.5138 29 1 4.5302 2.7719 -0.7538 30 1 4.7716 4.0873 0.4210 31 1 4.3764 2.4475 0.9896 32 1 2.7875 6.6803 1.4480 33 1 3.8558 5.2501 1.7864 34 1 2.7205 8.3032 0.4451 35 1 3.4629 10.6374 0.1939 36 1 5.6456 11.1314 -0.8332 37 1 7.0901 9.2907 -1.6003 38 1 6.3514 6.9561 -1.3415 39 1 2.8692 5.1536 -1.9144 40 1 2.0916 6.6115 -1.1601 41 1 4.5890 1.2109 -0.0127 42 1 5.3880 -1.5032 0.8878 43 1 6.3491 -2.0247 -1.2357 44 1 3.3617 -3.6873 1.2225 45 1 3.3336 -3.6769 -1.2102 46 1 1.9734 -2.0073 -0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:18 Heat of formation + Delta-G solvation = 63.865675 kcal Electronic energy + Delta-G solvation = -27623.697458 eV Core-core repulsion = 23868.632500 eV Total energy + Delta-G solvation = -3755.064959 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.71593 -41.66092 -40.05725 -38.72945 -37.64666 -35.59998 -33.00162 -32.55657 -31.82431 -31.41488 -29.08489 -28.60755 -26.75578 -26.41171 -24.92655 -23.96536 -23.31684 -22.01236 -21.70619 -20.30059 -19.49285 -18.57897 -18.24481 -17.95762 -17.23670 -17.06775 -16.68037 -16.22000 -16.00768 -15.82283 -15.46535 -15.32017 -15.09451 -14.94105 -14.82537 -14.28367 -14.26829 -14.14858 -14.04281 -13.85087 -13.69788 -13.55930 -13.46164 -13.04147 -12.99142 -12.72354 -12.53877 -12.44892 -12.12781 -12.01659 -11.68275 -11.56162 -11.19098 -10.88986 -10.37259 -10.03417 -9.80783 -9.74250 -9.52293 -9.19428 -5.12225 0.44432 0.51828 0.54590 1.08026 1.21593 1.55267 1.77059 1.80704 2.07199 2.36661 2.84826 3.36953 3.43422 3.65661 3.66873 3.70337 3.82109 3.91823 3.95587 4.00581 4.07130 4.15943 4.20183 4.24621 4.31213 4.38651 4.46500 4.54364 4.55706 4.59569 4.61367 4.65818 4.68766 4.73066 4.79673 4.86927 4.87724 4.97030 4.97771 5.07605 5.15254 5.19730 5.23185 5.57957 5.59999 5.62051 5.66022 5.75097 5.78509 6.14296 6.18776 6.38122 6.91408 7.17770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C 0.108 3.892 3 C -0.258 4.258 4 C 0.586 3.414 5 O -0.585 6.585 6 N -0.589 5.589 7 C 0.054 3.946 8 C 0.115 3.885 9 H 0.085 0.915 10 C -0.129 4.129 11 C -0.070 4.070 12 H 0.117 0.883 13 C -0.079 4.079 14 C -0.127 4.127 15 C -0.130 4.130 16 C -0.138 4.138 17 C -0.130 4.130 18 C -0.128 4.128 19 C -0.136 4.136 20 C -0.144 4.144 21 C -0.001 4.001 22 C -0.045 4.045 23 O -0.561 6.561 24 Si 0.773 3.227 25 N -0.549 5.549 26 H 0.082 0.918 27 H 0.086 0.914 28 H 0.084 0.916 29 H 0.069 0.931 30 H 0.103 0.897 31 H 0.082 0.918 32 H 0.105 0.895 33 H 0.086 0.914 34 H 0.131 0.869 35 H 0.133 0.867 36 H 0.132 0.868 37 H 0.135 0.865 38 H 0.134 0.866 39 H 0.061 0.939 40 H 0.093 0.907 41 H 0.184 0.816 42 H 0.111 0.889 43 H 0.407 0.593 44 H -0.282 1.282 45 H -0.297 1.297 46 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.333 -4.135 2.229 8.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.011 4.011 3 C -0.268 4.268 4 C 0.378 3.622 5 O -0.468 6.468 6 N -0.320 5.320 7 C -0.087 4.087 8 C 0.010 3.990 9 H 0.104 0.896 10 C -0.166 4.166 11 C -0.088 4.088 12 H 0.134 0.866 13 C -0.079 4.079 14 C -0.145 4.145 15 C -0.148 4.148 16 C -0.156 4.156 17 C -0.148 4.148 18 C -0.146 4.146 19 C -0.175 4.175 20 C -0.167 4.167 21 C -0.109 4.109 22 C -0.156 4.156 23 O -0.371 6.371 24 Si 0.678 3.322 25 N -0.149 5.149 26 H 0.100 0.900 27 H 0.105 0.895 28 H 0.103 0.897 29 H 0.088 0.912 30 H 0.121 0.879 31 H 0.101 0.899 32 H 0.123 0.877 33 H 0.105 0.895 34 H 0.149 0.851 35 H 0.151 0.849 36 H 0.150 0.850 37 H 0.153 0.847 38 H 0.152 0.848 39 H 0.080 0.920 40 H 0.111 0.889 41 H 0.200 0.800 42 H 0.129 0.871 43 H 0.259 0.741 44 H -0.208 1.208 45 H -0.224 1.224 46 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges 5.616 -4.210 2.071 7.318 hybrid contribution -0.516 0.210 -0.157 0.578 sum 5.100 -4.000 1.914 6.759 Atomic orbital electron populations 1.20574 0.86032 1.04466 1.03928 1.20608 0.94413 0.85564 1.00543 1.20191 0.94398 0.91544 1.20690 1.17599 0.84651 0.84800 0.75128 1.90714 1.18498 1.84719 1.52836 1.47293 1.07615 1.05029 1.72024 1.22785 0.79613 1.03653 1.02695 1.21925 0.99225 0.80083 0.97723 0.89642 1.23500 0.97264 0.99547 0.96325 1.21879 0.97017 0.93124 0.96741 0.86572 1.19860 0.94581 0.95006 0.98427 1.21224 1.00193 0.92560 1.00544 1.21420 0.96897 0.97125 0.99369 1.21449 0.94950 1.00079 0.99078 1.21440 1.00472 0.92959 0.99885 1.21321 0.96341 0.97307 0.99587 1.23430 0.96990 0.99760 0.97323 1.22873 0.96193 0.92779 1.04882 1.19965 0.83853 0.95376 1.11701 1.24102 0.92304 1.06740 0.92442 1.86453 1.43270 1.65529 1.41865 0.93595 0.85281 0.76914 0.76431 1.41850 1.05946 1.08329 1.58815 0.89968 0.89480 0.89690 0.91215 0.87872 0.89927 0.87699 0.89535 0.85144 0.84922 0.84962 0.84745 0.84796 0.91979 0.88874 0.79963 0.87100 0.74068 1.20824 1.22393 0.74609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.47 9.82 71.24 0.70 0.23 16 2 C 0.11 0.82 7.17 41.78 0.30 1.12 16 3 C -0.26 -2.39 6.15 -19.04 -0.12 -2.51 16 4 C 0.59 6.97 7.66 86.61 0.66 7.63 16 5 O -0.59 -10.63 14.48 -4.12 -0.06 -10.69 16 6 N -0.59 -3.19 3.07 -823.69 -2.53 -5.72 16 7 C 0.05 -0.09 7.43 127.77 0.95 0.86 16 8 C 0.11 0.47 4.35 45.52 0.20 0.67 16 9 H 0.09 0.71 7.41 -2.38 -0.02 0.69 16 10 C -0.13 0.13 6.66 31.21 0.21 0.33 16 11 C -0.07 0.06 3.32 -10.92 -0.04 0.02 16 12 H 0.12 -0.37 5.52 -2.38 -0.01 -0.39 16 13 C -0.08 -0.12 5.29 -19.87 -0.11 -0.23 16 14 C -0.13 -0.24 8.60 22.27 0.19 -0.05 16 15 C -0.13 -0.27 10.05 22.27 0.22 -0.04 16 16 C -0.14 -0.27 10.05 22.27 0.22 -0.05 16 17 C -0.13 -0.22 10.05 22.27 0.22 0.01 16 18 C -0.13 -0.19 9.71 22.27 0.22 0.03 16 19 C -0.14 -0.36 7.30 31.12 0.23 -0.13 16 20 C -0.14 -0.64 8.72 23.62 0.21 -0.43 16 21 C 0.00 0.00 6.14 40.98 0.25 0.25 16 22 C -0.04 0.19 2.97 71.24 0.21 0.40 16 23 O -0.56 2.15 12.84 -148.98 -1.91 0.23 16 24 Si 0.77 -4.57 30.94 68.60 2.12 -2.45 16 25 N -0.55 -2.30 5.41 -171.07 -0.93 -3.23 16 26 H 0.08 0.39 8.14 -2.38 -0.02 0.37 16 27 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 28 H 0.08 0.77 6.63 -2.38 -0.02 0.75 16 29 H 0.07 -0.13 6.93 -2.39 -0.02 -0.15 16 30 H 0.10 -0.55 3.96 -2.39 -0.01 -0.56 16 31 H 0.08 -0.23 5.98 -2.39 -0.01 -0.24 16 32 H 0.10 -0.21 6.33 -2.38 -0.02 -0.22 16 33 H 0.09 -0.20 7.27 -2.39 -0.02 -0.22 16 34 H 0.13 -0.09 6.68 -2.91 -0.02 -0.11 16 35 H 0.13 -0.16 8.06 -2.91 -0.02 -0.18 16 36 H 0.13 -0.17 8.06 -2.91 -0.02 -0.20 16 37 H 0.13 -0.25 8.06 -2.91 -0.02 -0.28 16 38 H 0.13 -0.29 8.05 -2.91 -0.02 -0.31 16 39 H 0.06 0.32 8.14 -2.38 -0.02 0.30 16 40 H 0.09 0.23 7.72 -2.39 -0.02 0.22 16 41 H 0.18 -0.07 4.54 -2.91 -0.01 -0.09 16 42 H 0.11 -1.01 7.96 -2.39 -0.02 -1.03 16 43 H 0.41 -5.95 8.74 -74.06 -0.65 -6.60 16 44 H -0.28 0.31 7.11 99.48 0.71 1.02 16 45 H -0.30 -0.56 7.11 99.48 0.71 0.14 16 46 H 0.41 0.28 6.70 -92.71 -0.62 -0.35 16 Total: 0.00 -22.41 361.41 1.23 -21.17 By element: Atomic # 1 Polarization: -7.24 SS G_CDS: -0.20 Total: -7.44 kcal Atomic # 6 Polarization: 3.38 SS G_CDS: 4.73 Total: 8.12 kcal Atomic # 7 Polarization: -5.49 SS G_CDS: -3.46 Total: -8.95 kcal Atomic # 8 Polarization: -8.49 SS G_CDS: -1.97 Total: -10.46 kcal Atomic # 14 Polarization: -4.57 SS G_CDS: 2.12 Total: -2.45 kcal Total: -22.41 1.23 -21.17 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.040 kcal (2) G-P(sol) polarization free energy of solvation -22.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.174 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.866 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds