Wall clock time and date at job start Tue Mar 9 2021 13:23:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45209 * 1 3 3 C 1.34225 * 116.99961 * 2 1 4 4 O 1.20823 * 120.00114 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99658 * 180.02562 * 3 2 1 6 6 N 1.46901 * 109.46644 * 187.94272 * 5 3 2 7 7 C 1.46893 * 111.00098 * 83.36330 * 6 5 3 8 8 C 1.50703 * 109.47370 * 290.03630 * 7 6 5 9 9 C 1.38231 * 119.99835 * 276.39530 * 8 7 6 10 10 C 1.38242 * 119.99555 * 179.78722 * 9 8 7 11 11 C 1.38237 * 120.00041 * 0.46229 * 10 9 8 12 12 C 1.38237 * 119.99585 * 359.76851 * 11 10 9 13 13 C 1.38228 * 120.00538 * 0.02562 * 12 11 10 14 14 C 1.46906 * 110.99739 * 207.31857 * 6 5 3 15 15 H 1.08993 * 112.84767 * 197.24657 * 14 6 5 16 16 C 1.53785 * 113.61130 * 328.54605 * 14 6 5 17 17 C 1.53784 * 87.07829 * 139.98158 * 16 14 6 18 18 H 1.09001 * 113.69009 * 89.12505 * 17 16 14 19 19 N 1.46504 * 113.61517 * 220.01680 * 17 16 14 20 20 C 1.34775 * 119.99678 * 252.50016 * 19 17 16 21 21 O 1.21688 * 120.00446 * 359.97438 * 20 19 17 22 22 C 1.46687 * 119.99462 * 180.02562 * 20 19 17 23 23 C 1.37870 * 126.23007 * 180.02562 * 22 20 19 24 24 C 1.39834 * 107.08356 * 179.97438 * 23 22 20 25 25 C 1.35455 * 107.86261 * 0.02562 * 24 23 22 26 26 C 1.50703 * 125.56066 * 179.97438 * 25 24 23 27 27 O 1.42894 * 109.47166 * 120.02552 * 26 25 24 28 28 Si 1.86299 * 109.47226 * 0.02562 * 26 25 24 29 29 N 1.35526 * 108.87617 * 0.26424 * 25 24 23 30 30 C 1.53777 * 87.08320 * 334.56858 * 17 16 14 31 31 H 1.09004 * 109.47070 * 300.00322 * 1 2 3 32 32 H 1.08996 * 109.46793 * 60.00479 * 1 2 3 33 33 H 1.09000 * 109.46889 * 180.02562 * 1 2 3 34 34 H 1.08993 * 109.47431 * 67.93901 * 5 3 2 35 35 H 1.09005 * 109.46615 * 307.93889 * 5 3 2 36 36 H 1.09000 * 109.47156 * 50.04143 * 7 6 5 37 37 H 1.09007 * 109.47178 * 170.03392 * 7 6 5 38 38 H 1.07998 * 120.00156 * 0.02562 * 9 8 7 39 39 H 1.07995 * 119.99742 * 180.25322 * 10 9 8 40 40 H 1.07991 * 120.00139 * 179.79077 * 11 10 9 41 41 H 1.08009 * 119.99353 * 179.97438 * 12 11 10 42 42 H 1.07999 * 120.00389 * 179.97438 * 13 12 11 43 43 H 1.09001 * 113.61739 * 25.43900 * 16 14 6 44 44 H 1.09000 * 113.61431 * 254.53022 * 16 14 6 45 45 H 0.96997 * 119.99506 * 72.49635 * 19 17 16 46 46 H 1.07998 * 126.45886 * 359.97438 * 23 22 20 47 47 H 1.07992 * 126.06980 * 180.02562 * 24 23 22 48 48 H 1.09011 * 109.47117 * 240.02461 * 26 25 24 49 49 H 0.96699 * 113.99974 * 299.99541 * 27 26 25 50 50 H 1.48504 * 109.99920 * 58.68586 * 28 26 25 51 51 H 1.48501 * 109.99890 * 179.97438 * 28 26 25 52 52 H 0.97003 * 125.68040 * 179.70736 * 29 25 24 53 53 H 1.09000 * 113.62009 * 139.98023 * 30 17 16 54 54 H 1.09007 * 113.61272 * 270.80458 * 30 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 7 3.9837 2.6702 0.1909 7 6 3.9916 3.0264 1.6160 8 6 2.5748 3.0913 2.1255 9 6 1.8292 4.2419 1.9500 10 6 0.5281 4.2997 2.4135 11 6 -0.0240 3.2103 3.0611 12 6 0.7234 2.0614 3.2408 13 6 2.0229 2.0020 2.7735 14 6 5.2967 2.9156 -0.4205 15 1 5.7708 3.8260 -0.0538 16 6 6.2224 1.6877 -0.4054 17 6 6.6567 2.0958 -1.8231 18 1 7.5039 2.7814 -1.8413 19 7 6.8229 0.9616 -2.7353 20 6 8.0581 0.5739 -3.1102 21 8 9.0351 1.1662 -2.6915 22 6 8.2245 -0.5615 -4.0241 23 6 9.4209 -1.0650 -4.4886 24 6 9.1155 -2.1402 -5.3288 25 6 7.7677 -2.2714 -5.3626 26 6 7.0074 -3.3081 -6.1489 27 8 6.2336 -4.1109 -5.2553 28 14 8.2090 -4.3905 -7.0738 29 7 7.2143 -1.3142 -4.5788 30 6 5.2943 2.7969 -1.9537 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5137 -0.8900 33 1 -0.3633 -1.0277 0.0005 34 1 3.9491 0.9085 -0.9532 35 1 3.9625 0.6626 0.8097 36 1 4.5450 2.2726 2.1759 37 1 4.4690 3.9979 1.7450 38 1 2.2618 5.0943 1.4473 39 1 -0.0559 5.1972 2.2727 40 1 -1.0393 3.2567 3.4262 41 1 0.2921 1.2104 3.7471 42 1 2.6070 1.1046 2.9144 43 1 5.6880 0.7384 -0.3688 44 1 7.0224 1.7530 0.3321 45 1 6.0441 0.4897 -3.0693 46 1 10.4079 -0.6982 -4.2488 47 1 9.8277 -2.7566 -5.8571 48 1 6.3447 -2.8122 -6.8583 49 1 6.7594 -4.5827 -4.5950 50 1 9.1385 -5.0476 -6.1202 51 1 7.4716 -5.4174 -7.8529 52 1 6.2645 -1.1830 -4.4313 53 1 5.3448 3.7576 -2.4661 54 1 4.5064 2.1512 -2.3416 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928150_6580494.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:28 Heat of formation + Delta-G solvation = -19.544898 kcal Electronic energy + Delta-G solvation = -38300.380722 eV Core-core repulsion = 33399.607136 eV Total energy + Delta-G solvation = -4900.773586 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.188 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -42.54656 -41.92516 -40.95681 -40.05881 -39.57283 -37.82232 -37.44815 -36.52042 -34.40402 -32.41373 -32.05843 -31.75475 -31.31628 -30.08566 -27.92649 -27.33648 -26.81206 -26.19704 -24.25135 -23.44910 -22.75130 -22.49739 -21.73744 -21.48149 -21.18207 -20.36694 -19.57196 -18.86097 -18.16562 -18.02720 -17.71461 -17.46717 -17.29900 -16.69570 -16.65606 -16.41644 -16.12697 -16.06053 -15.93215 -15.64803 -15.23415 -15.15318 -14.91026 -14.80126 -14.45833 -14.34048 -14.26611 -14.15626 -14.08749 -13.96218 -13.68256 -13.63693 -13.49300 -13.44605 -13.25969 -12.92675 -12.67333 -12.35466 -12.29203 -12.11450 -12.00130 -11.89595 -11.82202 -11.69455 -11.65664 -11.32078 -11.26270 -10.82915 -10.25147 -10.06229 -9.76149 -9.57051 -9.38531 -9.26558 -4.82687 0.30061 0.44460 0.55922 1.23187 1.37416 1.56135 1.66295 1.70468 1.89985 2.01686 2.22530 2.26888 2.71356 3.09574 3.35347 3.43798 3.53187 3.60186 3.67374 3.78547 3.80697 3.87002 3.92495 3.98601 4.04449 4.13728 4.17523 4.27056 4.27236 4.29239 4.31249 4.33886 4.39745 4.51076 4.53421 4.59412 4.61204 4.63447 4.68996 4.69788 4.78478 4.89429 4.95826 4.98991 5.04827 5.12644 5.15238 5.17760 5.40027 5.48432 5.55786 5.59371 5.64293 5.68745 5.80329 5.84600 5.92468 6.17461 6.27780 6.40900 6.45717 6.93679 7.03264 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.372 6.372 3 C 0.448 3.552 4 O -0.494 6.494 5 C 0.062 3.938 6 N -0.513 5.513 7 C 0.093 3.907 8 C -0.072 4.072 9 C -0.090 4.090 10 C -0.129 4.129 11 C -0.132 4.132 12 C -0.130 4.130 13 C -0.134 4.134 14 C 0.078 3.922 15 H 0.125 0.875 16 C -0.185 4.185 17 C 0.124 3.876 18 H 0.106 0.894 19 N -0.706 5.706 20 C 0.591 3.409 21 O -0.569 6.569 22 C -0.064 4.064 23 C -0.118 4.118 24 C -0.205 4.205 25 C 0.031 3.969 26 C -0.062 4.062 27 O -0.548 6.548 28 Si 0.792 3.208 29 N -0.512 5.512 30 C -0.129 4.129 31 H 0.054 0.946 32 H 0.055 0.945 33 H 0.122 0.878 34 H 0.130 0.870 35 H 0.093 0.907 36 H 0.060 0.940 37 H 0.099 0.901 38 H 0.120 0.880 39 H 0.124 0.876 40 H 0.127 0.873 41 H 0.127 0.873 42 H 0.121 0.879 43 H 0.100 0.900 44 H 0.074 0.926 45 H 0.408 0.592 46 H 0.145 0.855 47 H 0.167 0.833 48 H 0.135 0.865 49 H 0.389 0.611 50 H -0.283 1.283 51 H -0.299 1.299 52 H 0.427 0.573 53 H 0.085 0.915 54 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.912 -2.741 -2.039 3.536 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.289 6.289 3 C 0.289 3.711 4 O -0.379 6.379 5 C -0.067 4.067 6 N -0.236 5.236 7 C -0.033 4.033 8 C -0.073 4.073 9 C -0.109 4.109 10 C -0.147 4.147 11 C -0.150 4.150 12 C -0.148 4.148 13 C -0.152 4.152 14 C -0.030 4.030 15 H 0.143 0.857 16 C -0.225 4.225 17 C 0.019 3.981 18 H 0.124 0.876 19 N -0.356 5.356 20 C 0.379 3.621 21 O -0.448 6.448 22 C -0.178 4.178 23 C -0.145 4.145 24 C -0.229 4.229 25 C -0.088 4.088 26 C -0.171 4.171 27 O -0.356 6.356 28 Si 0.696 3.304 29 N -0.109 5.109 30 C -0.167 4.167 31 H 0.073 0.927 32 H 0.074 0.926 33 H 0.140 0.860 34 H 0.147 0.853 35 H 0.111 0.889 36 H 0.078 0.922 37 H 0.117 0.883 38 H 0.138 0.862 39 H 0.142 0.858 40 H 0.145 0.855 41 H 0.145 0.855 42 H 0.139 0.861 43 H 0.118 0.882 44 H 0.093 0.907 45 H 0.244 0.756 46 H 0.163 0.837 47 H 0.184 0.816 48 H 0.153 0.847 49 H 0.239 0.761 50 H -0.209 1.209 51 H -0.227 1.227 52 H 0.267 0.733 53 H 0.104 0.896 54 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -1.172 -2.185 -2.375 3.433 hybrid contribution -0.944 -0.827 1.536 1.984 sum -2.116 -3.012 -0.839 3.776 Atomic orbital electron populations 1.23324 0.75636 1.04773 1.01888 1.86456 1.24118 1.33736 1.84564 1.23984 0.92734 0.81313 0.73046 1.90726 1.67121 1.36553 1.43478 1.21736 0.87463 0.91578 1.05925 1.61351 1.27758 1.19768 1.14692 1.21216 0.92514 1.02876 0.86706 1.19761 0.96263 0.93835 0.97415 1.20982 0.94183 0.97973 0.97745 1.21310 0.95855 0.98974 0.98522 1.21294 1.00292 0.93785 0.99644 1.21225 0.94758 0.98356 1.00413 1.21153 0.95905 0.98234 0.99941 1.23090 0.86157 0.98865 0.94934 0.85719 1.24312 1.00597 1.00133 0.97448 1.22379 0.98740 0.88123 0.88907 0.87612 1.45731 1.07249 1.33919 1.48749 1.17238 0.83592 0.81933 0.79295 1.90845 1.40180 1.56418 1.57366 1.20337 0.89478 1.00361 1.07639 1.21488 0.97074 0.97190 0.98699 1.20935 0.94167 1.02300 1.05509 1.21248 0.93686 0.94599 0.99218 1.25047 1.02842 0.94044 0.95131 1.86577 1.37265 1.63782 1.47975 0.93316 0.76739 0.78880 0.81488 1.41875 1.08904 1.24091 1.36036 1.23490 0.95199 1.01986 0.96074 0.92724 0.92596 0.86028 0.85272 0.88947 0.92235 0.88322 0.86173 0.85788 0.85536 0.85509 0.86065 0.88170 0.90690 0.75579 0.83686 0.81577 0.84726 0.76077 1.20940 1.22723 0.73295 0.89603 0.88688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.37 -0.67 10.57 -51.37 -0.54 -1.22 16 3 C 0.45 1.10 5.78 71.24 0.41 1.51 16 4 O -0.49 -4.11 12.94 21.97 0.28 -3.82 16 5 C 0.06 -0.24 3.84 85.56 0.33 0.09 16 6 N -0.51 1.55 4.17 -876.96 -3.66 -2.11 16 7 C 0.09 -0.20 5.07 85.56 0.43 0.23 16 8 C -0.07 -0.21 3.17 -19.87 -0.06 -0.27 16 9 C -0.09 -0.46 8.81 22.27 0.20 -0.27 16 10 C -0.13 -0.71 10.05 22.27 0.22 -0.49 16 11 C -0.13 -0.62 10.05 22.27 0.22 -0.40 16 12 C -0.13 -0.49 10.05 22.27 0.22 -0.26 16 13 C -0.13 -0.40 7.34 22.27 0.16 -0.23 16 14 C 0.08 -0.48 3.90 45.44 0.18 -0.30 16 15 H 0.12 -0.90 7.84 -2.39 -0.02 -0.92 16 16 C -0.18 1.13 7.03 31.12 0.22 1.35 16 17 C 0.12 -0.49 4.24 45.52 0.19 -0.29 16 18 H 0.11 0.03 7.46 -2.39 -0.02 0.01 16 19 N -0.71 2.54 5.35 -443.99 -2.38 0.17 16 20 C 0.59 2.33 7.79 86.45 0.67 3.01 16 21 O -0.57 -7.14 16.48 -4.31 -0.07 -7.21 16 22 C -0.06 -0.11 7.06 40.35 0.28 0.18 16 23 C -0.12 -0.34 10.65 22.57 0.24 -0.10 16 24 C -0.21 0.31 9.32 22.01 0.21 0.51 16 25 C 0.03 -0.11 6.47 41.35 0.27 0.16 16 26 C -0.06 0.35 3.08 71.24 0.22 0.57 16 27 O -0.55 1.69 12.88 -148.98 -1.92 -0.23 16 28 Si 0.79 -4.37 30.54 68.60 2.10 -2.28 16 29 N -0.51 2.02 5.99 -171.92 -1.03 0.99 16 30 C -0.13 0.83 7.26 31.12 0.23 1.06 16 31 H 0.05 0.07 8.13 -2.39 -0.02 0.05 16 32 H 0.06 0.03 8.13 -2.39 -0.02 0.01 16 33 H 0.12 -0.69 8.14 -2.39 -0.02 -0.71 16 34 H 0.13 -1.01 5.31 -2.39 -0.01 -1.03 16 35 H 0.09 -0.57 7.42 -2.38 -0.02 -0.59 16 36 H 0.06 -0.26 7.70 -2.39 -0.02 -0.28 16 37 H 0.10 -0.37 7.81 -2.38 -0.02 -0.39 16 38 H 0.12 0.44 8.06 -2.91 -0.02 0.42 16 39 H 0.12 0.37 8.06 -2.91 -0.02 0.34 16 40 H 0.13 0.20 8.06 -2.92 -0.02 0.18 16 41 H 0.13 0.07 8.06 -2.91 -0.02 0.04 16 42 H 0.12 0.01 8.06 -2.91 -0.02 -0.01 16 43 H 0.10 -0.78 5.66 -2.39 -0.01 -0.79 16 44 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 45 H 0.41 -3.80 7.86 -92.71 -0.73 -4.53 16 46 H 0.15 0.53 8.06 -2.91 -0.02 0.50 16 47 H 0.17 -0.92 6.17 -2.91 -0.02 -0.94 16 48 H 0.14 -1.11 7.96 -2.38 -0.02 -1.13 16 49 H 0.39 -2.96 8.70 -74.06 -0.64 -3.61 16 50 H -0.28 0.21 7.11 99.48 0.71 0.91 16 51 H -0.30 -0.60 7.11 99.48 0.71 0.10 16 52 H 0.43 -3.87 8.19 -92.71 -0.76 -4.63 16 53 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 54 H 0.09 -0.71 6.82 -2.38 -0.02 -0.73 16 Total: 0.00 -24.71 438.57 -2.30 -27.01 By element: Atomic # 1 Polarization: -17.40 SS G_CDS: -1.13 Total: -18.53 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: 6.04 Total: 7.23 kcal Atomic # 7 Polarization: 6.11 SS G_CDS: -7.06 Total: -0.95 kcal Atomic # 8 Polarization: -10.24 SS G_CDS: -2.25 Total: -12.48 kcal Atomic # 14 Polarization: -4.37 SS G_CDS: 2.10 Total: -2.28 kcal Total: -24.71 -2.30 -27.01 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928150_6580494.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.465 kcal (2) G-P(sol) polarization free energy of solvation -24.714 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.296 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.010 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds