Wall clock time and date at job start Tue Mar 9 2021 13:24:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35457 * 125.56072 * 2 1 4 4 C 1.50697 * 126.06751 * 0.02562 * 3 2 1 5 5 O 1.42899 * 109.47022 * 114.54523 * 4 3 2 6 6 Si 1.86302 * 109.46888 * 234.54429 * 4 3 2 7 7 C 1.39837 * 107.86177 * 179.76324 * 3 2 1 8 8 C 1.50699 * 126.45659 * 180.26239 * 7 3 2 9 9 C 1.37867 * 107.08560 * 0.41973 * 7 3 2 10 10 C 1.46675 * 126.23492 * 179.84796 * 9 7 3 11 11 O 1.21699 * 120.00229 * 359.71184 * 10 9 7 12 12 N 1.34783 * 120.00432 * 179.71229 * 10 9 7 13 13 C 1.46499 * 119.99874 * 179.97438 * 12 10 9 14 14 H 1.08994 * 112.91128 * 336.25357 * 13 12 10 15 15 C 1.53780 * 113.61305 * 107.51075 * 13 12 10 16 16 C 1.53776 * 87.08496 * 139.97664 * 15 13 12 17 17 H 1.09000 * 113.61722 * 89.11134 * 16 15 13 18 18 C 1.52995 * 113.61484 * 220.01716 * 16 15 13 19 19 N 1.46504 * 109.47150 * 272.49645 * 18 16 15 20 20 C 1.35310 * 125.87109 * 124.99854 * 19 18 16 21 21 C 1.35345 * 106.17822 * 180.02562 * 20 19 18 22 22 N 1.33770 * 106.49757 * 0.02562 * 21 20 19 23 23 N 1.28634 * 108.88485 * 359.73695 * 22 21 20 24 24 C 1.53776 * 87.08103 * 334.56651 * 16 15 13 25 25 N 1.35530 * 125.56720 * 180.02562 * 2 1 3 26 26 H 1.09002 * 109.47171 * 275.23418 * 1 2 3 27 27 H 1.08992 * 109.47337 * 35.23752 * 1 2 3 28 28 H 1.09000 * 109.46958 * 155.24291 * 1 2 3 29 29 H 1.08997 * 109.47079 * 354.54537 * 4 3 2 30 30 H 0.96704 * 114.00332 * 59.99900 * 5 4 3 31 31 H 1.48503 * 109.99921 * 180.02562 * 6 4 3 32 32 H 1.48506 * 109.99880 * 301.31690 * 6 4 3 33 33 H 1.08994 * 109.47302 * 270.20838 * 8 7 3 34 34 H 1.09002 * 109.47264 * 30.20893 * 8 7 3 35 35 H 1.09003 * 109.47009 * 150.20988 * 8 7 3 36 36 H 0.96997 * 119.99780 * 0.02562 * 12 10 9 37 37 H 1.08993 * 113.61636 * 25.42297 * 15 13 12 38 38 H 1.09003 * 113.60756 * 254.52792 * 15 13 12 39 39 H 1.09001 * 109.47431 * 32.49733 * 18 16 15 40 40 H 1.08998 * 109.47282 * 152.49484 * 18 16 15 41 41 H 1.08002 * 126.90941 * 0.02562 * 20 19 18 42 42 H 1.08003 * 126.75077 * 180.02562 * 21 20 19 43 43 H 1.08995 * 113.62263 * 139.98247 * 24 16 15 44 44 H 1.09002 * 113.61165 * 270.88607 * 24 16 15 45 45 H 0.97002 * 125.67535 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 0.0005 5 8 2.2013 3.1602 1.2261 6 14 2.5905 3.4429 -1.4303 7 6 3.6269 0.6768 0.0055 8 6 4.8485 1.5593 0.0130 9 6 3.6122 -0.7018 -0.0009 10 6 4.7860 -1.5813 -0.0015 11 8 5.9050 -1.1029 -0.0013 12 7 4.6254 -2.9196 -0.0023 13 6 5.7978 -3.7980 -0.0034 14 1 6.6882 -3.3167 -0.4079 15 6 6.0373 -4.5075 1.3397 16 6 6.4073 -5.7574 0.5240 17 1 7.4644 -5.8118 0.2637 18 6 5.8737 -7.0602 1.1228 19 7 6.8379 -7.5819 2.0947 20 6 6.5753 -7.8872 3.3865 21 6 7.7403 -8.3309 3.9135 22 7 8.6469 -8.2755 2.9314 23 7 8.0794 -7.8325 1.8654 24 6 5.5248 -5.1890 -0.5997 25 7 2.2953 -1.1024 -0.0005 26 1 -0.3633 0.0938 1.0234 27 1 -0.3633 0.8393 -0.5929 28 1 -0.3633 -0.9332 -0.4304 29 1 0.7344 2.5545 -0.0967 30 1 3.1560 3.1765 1.3792 31 1 2.1306 4.8548 -1.4406 32 1 4.0711 3.3923 -1.3262 33 1 5.1457 1.7771 -1.0127 34 1 4.6205 2.4910 0.5309 35 1 5.6629 1.0481 0.5265 36 1 3.7335 -3.3010 -0.0028 37 1 5.1337 -4.6277 1.9372 38 1 6.8704 -4.0950 1.9089 39 1 4.9232 -6.8687 1.6209 40 1 5.7266 -7.7918 0.3284 41 1 5.6268 -7.7954 3.8948 42 1 7.9055 -8.6641 4.9274 43 1 5.9440 -5.3268 -1.5963 44 1 4.4809 -5.4956 -0.5324 45 1 1.9834 -2.0209 -0.0006 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_12297754.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:42 Heat of formation + Delta-G solvation = 104.537814 kcal Electronic energy + Delta-G solvation = -27983.821418 eV Core-core repulsion = 24006.930925 eV Total energy + Delta-G solvation = -3976.890494 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -44.18036 -42.74629 -41.16166 -39.43260 -37.84443 -35.92429 -34.55892 -33.79930 -32.90390 -31.96891 -29.80946 -29.37638 -27.61523 -27.08432 -26.50310 -24.68649 -23.63454 -22.77146 -22.06973 -21.24286 -20.83452 -20.16782 -19.34496 -18.77588 -17.82701 -17.68888 -16.96949 -16.93446 -16.56074 -16.44382 -15.91499 -15.80777 -15.53879 -15.37898 -15.12855 -14.87009 -14.69370 -14.36882 -14.27197 -13.94039 -13.83319 -13.79808 -13.68210 -13.36527 -13.30803 -13.17750 -12.79483 -12.70777 -12.49625 -12.34404 -12.20392 -11.84786 -11.80882 -11.50610 -11.03226 -10.88849 -10.71504 -10.33823 -10.28587 -9.57924 -9.04234 -4.83868 0.33393 0.63518 1.26997 1.29523 1.55445 1.67926 1.75068 1.86533 1.95298 2.13782 2.28139 3.01578 3.09058 3.24210 3.43988 3.52419 3.52587 3.66408 3.67786 3.68345 3.81324 3.92137 3.98828 4.01345 4.10611 4.26861 4.28106 4.29045 4.34907 4.42621 4.43780 4.48151 4.52334 4.61185 4.73256 4.75893 4.76911 4.84789 4.94446 4.96251 5.09392 5.22015 5.25900 5.33266 5.56988 5.63605 5.84166 6.19323 6.35599 6.52408 7.05942 7.57954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.085 3.915 3 C -0.205 4.205 4 C -0.035 4.035 5 O -0.531 6.531 6 Si 0.670 3.330 7 C -0.059 4.059 8 C -0.098 4.098 9 C -0.061 4.061 10 C 0.592 3.408 11 O -0.521 6.521 12 N -0.724 5.724 13 C 0.129 3.871 14 H 0.123 0.877 15 C -0.149 4.149 16 C -0.124 4.124 17 H 0.115 0.885 18 C 0.127 3.873 19 N -0.289 5.289 20 C -0.052 4.052 21 C -0.051 4.051 22 N -0.271 5.271 23 N -0.083 5.083 24 C -0.135 4.135 25 N -0.537 5.537 26 H 0.081 0.919 27 H 0.089 0.911 28 H 0.069 0.931 29 H 0.111 0.889 30 H 0.372 0.628 31 H -0.260 1.260 32 H -0.241 1.241 33 H 0.076 0.924 34 H 0.054 0.946 35 H 0.086 0.914 36 H 0.394 0.606 37 H 0.087 0.913 38 H 0.077 0.923 39 H 0.106 0.894 40 H 0.104 0.896 41 H 0.189 0.811 42 H 0.190 0.810 43 H 0.087 0.913 44 H 0.091 0.909 45 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.200 -3.217 -1.914 9.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.033 4.033 3 C -0.211 4.211 4 C -0.145 4.145 5 O -0.339 6.339 6 Si 0.570 3.430 7 C -0.067 4.067 8 C -0.155 4.155 9 C -0.172 4.172 10 C 0.381 3.619 11 O -0.396 6.396 12 N -0.374 5.374 13 C 0.024 3.976 14 H 0.140 0.860 15 C -0.188 4.188 16 C -0.143 4.143 17 H 0.133 0.867 18 C 0.006 3.994 19 N -0.083 5.083 20 C -0.203 4.203 21 C -0.208 4.208 22 N -0.136 5.136 23 N -0.063 5.063 24 C -0.174 4.174 25 N -0.134 5.134 26 H 0.099 0.901 27 H 0.108 0.892 28 H 0.088 0.912 29 H 0.129 0.871 30 H 0.221 0.779 31 H -0.185 1.185 32 H -0.165 1.165 33 H 0.095 0.905 34 H 0.073 0.927 35 H 0.104 0.896 36 H 0.228 0.772 37 H 0.105 0.895 38 H 0.096 0.904 39 H 0.125 0.875 40 H 0.122 0.878 41 H 0.206 0.794 42 H 0.207 0.793 43 H 0.106 0.894 44 H 0.109 0.891 45 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -7.363 -2.270 -3.181 8.336 hybrid contribution -1.145 -0.828 1.946 2.405 sum -8.508 -3.099 -1.235 9.139 Atomic orbital electron populations 1.20508 0.87169 1.03861 1.03763 1.20297 0.93613 0.85359 1.04056 1.19433 0.92341 0.95131 1.14233 1.24229 1.04371 0.91020 0.94895 1.86600 1.28512 1.80162 1.38579 0.95143 0.82028 0.80536 0.85311 1.19725 0.94592 0.91264 1.01150 1.20619 0.94935 0.97045 1.02863 1.19961 0.82803 0.93836 1.20628 1.17053 0.87570 0.81321 0.75953 1.90851 1.24189 1.74903 1.49676 1.45830 1.09298 1.05780 1.76542 1.22444 0.90083 0.88520 0.96525 0.85955 1.23611 1.02507 0.95306 0.97358 1.22741 1.02148 0.92005 0.97443 0.86672 1.22165 0.89562 0.96484 0.91187 1.47494 1.09358 1.41826 1.09655 1.23708 1.03016 1.07724 0.85826 1.23688 0.89641 1.06052 1.01408 1.75168 1.26652 1.15270 0.96558 1.78309 0.90443 1.16673 1.20918 1.23367 1.00465 0.94438 0.99081 1.41804 1.05327 1.08322 1.57945 0.90058 0.89215 0.91164 0.87110 0.77895 1.18473 1.16502 0.90533 0.92680 0.89558 0.77240 0.89482 0.90416 0.87542 0.87817 0.79357 0.79292 0.89427 0.89072 0.74782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.39 9.98 36.01 0.36 0.75 16 2 C 0.08 -0.12 7.13 -81.95 -0.58 -0.71 16 3 C -0.20 -0.08 4.66 -105.02 -0.49 -0.57 16 4 C -0.03 -0.01 2.86 36.00 0.10 0.10 16 5 O -0.53 -1.16 12.88 -35.23 -0.45 -1.61 16 6 Si 0.67 -0.09 30.98 -169.99 -5.27 -5.36 16 7 C -0.06 -0.10 5.82 -104.16 -0.61 -0.71 16 8 C -0.10 -0.20 7.72 36.01 0.28 0.08 16 9 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 10 C 0.59 0.81 7.79 -12.85 -0.10 0.71 16 11 O -0.52 -2.64 14.40 5.19 0.07 -2.57 16 12 N -0.72 1.74 5.35 -54.32 -0.29 1.45 16 13 C 0.13 -0.30 4.24 -67.12 -0.28 -0.58 16 14 H 0.12 -0.01 7.46 -51.93 -0.39 -0.39 16 15 C -0.15 0.39 7.43 -25.92 -0.19 0.20 16 16 C -0.12 0.42 3.84 -89.82 -0.34 0.08 16 17 H 0.12 -0.14 7.92 -51.93 -0.41 -0.56 16 18 C 0.13 -0.51 6.29 -4.04 -0.03 -0.54 16 19 N -0.29 0.01 3.44 -61.26 -0.21 -0.20 16 20 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 21 C -0.05 -0.06 12.05 -17.74 -0.21 -0.28 16 22 N -0.27 -1.34 12.41 30.23 0.38 -0.97 16 23 N -0.08 -0.32 12.77 60.35 0.77 0.45 16 24 C -0.13 0.65 7.39 -25.92 -0.19 0.46 16 25 N -0.54 1.28 5.99 -5.70 -0.03 1.25 16 26 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 27 H 0.09 -0.43 7.25 -51.93 -0.38 -0.81 16 28 H 0.07 -0.40 8.14 -51.93 -0.42 -0.82 16 29 H 0.11 -0.14 6.65 -51.93 -0.35 -0.48 16 30 H 0.37 0.08 6.57 45.56 0.30 0.38 16 31 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 32 H -0.24 -0.37 5.05 56.52 0.29 -0.08 16 33 H 0.08 0.17 7.14 -51.93 -0.37 -0.20 16 34 H 0.05 0.04 5.09 -51.93 -0.26 -0.23 16 35 H 0.09 0.30 6.49 -51.93 -0.34 -0.04 16 36 H 0.39 -2.16 7.86 -40.82 -0.32 -2.48 16 37 H 0.09 -0.33 7.90 -51.93 -0.41 -0.74 16 38 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.11 -0.72 7.77 -51.93 -0.40 -1.12 16 40 H 0.10 -0.50 8.14 -51.93 -0.42 -0.93 16 41 H 0.19 -0.96 8.06 -52.49 -0.42 -1.39 16 42 H 0.19 -0.33 8.06 -52.48 -0.42 -0.75 16 43 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 44 H 0.09 -0.63 8.08 -51.93 -0.42 -1.04 16 45 H 0.41 -2.41 8.19 -40.82 -0.33 -2.74 16 LS Contribution 367.38 15.07 5.54 5.54 Total: 0.00 -11.67 367.38 -8.92 -20.59 By element: Atomic # 1 Polarization: -10.44 SS G_CDS: -6.35 Total: -16.80 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -3.07 Total: -1.76 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: 0.61 Total: 1.98 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.38 Total: -4.18 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: -5.27 Total: -5.36 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -11.67 -8.92 -20.59 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12297754.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 125.127 kcal (2) G-P(sol) polarization free energy of solvation -11.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.459 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.589 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.538 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds