Wall clock time and date at job start Tue Mar 9 2021 13:24:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35457 * 125.56072 * 2 1 4 4 C 1.50697 * 126.06751 * 0.02562 * 3 2 1 5 5 O 1.42899 * 109.47022 * 114.54523 * 4 3 2 6 6 Si 1.86302 * 109.46888 * 234.54429 * 4 3 2 7 7 C 1.39837 * 107.86177 * 179.76324 * 3 2 1 8 8 C 1.50699 * 126.45659 * 180.26239 * 7 3 2 9 9 C 1.37867 * 107.08560 * 0.41973 * 7 3 2 10 10 C 1.46675 * 126.23492 * 179.84796 * 9 7 3 11 11 O 1.21699 * 120.00229 * 359.71184 * 10 9 7 12 12 N 1.34783 * 120.00432 * 179.71229 * 10 9 7 13 13 C 1.46499 * 119.99874 * 179.97438 * 12 10 9 14 14 H 1.08994 * 112.91128 * 336.25357 * 13 12 10 15 15 C 1.53780 * 113.61305 * 107.51075 * 13 12 10 16 16 C 1.53776 * 87.08496 * 139.97664 * 15 13 12 17 17 H 1.09000 * 113.61722 * 89.11134 * 16 15 13 18 18 C 1.52995 * 113.61484 * 220.01716 * 16 15 13 19 19 N 1.46504 * 109.47150 * 272.49645 * 18 16 15 20 20 C 1.35310 * 125.87109 * 124.99854 * 19 18 16 21 21 C 1.35345 * 106.17822 * 180.02562 * 20 19 18 22 22 N 1.33770 * 106.49757 * 0.02562 * 21 20 19 23 23 N 1.28634 * 108.88485 * 359.73695 * 22 21 20 24 24 C 1.53776 * 87.08103 * 334.56651 * 16 15 13 25 25 N 1.35530 * 125.56720 * 180.02562 * 2 1 3 26 26 H 1.09002 * 109.47171 * 275.23418 * 1 2 3 27 27 H 1.08992 * 109.47337 * 35.23752 * 1 2 3 28 28 H 1.09000 * 109.46958 * 155.24291 * 1 2 3 29 29 H 1.08997 * 109.47079 * 354.54537 * 4 3 2 30 30 H 0.96704 * 114.00332 * 59.99900 * 5 4 3 31 31 H 1.48503 * 109.99921 * 180.02562 * 6 4 3 32 32 H 1.48506 * 109.99880 * 301.31690 * 6 4 3 33 33 H 1.08994 * 109.47302 * 270.20838 * 8 7 3 34 34 H 1.09002 * 109.47264 * 30.20893 * 8 7 3 35 35 H 1.09003 * 109.47009 * 150.20988 * 8 7 3 36 36 H 0.96997 * 119.99780 * 0.02562 * 12 10 9 37 37 H 1.08993 * 113.61636 * 25.42297 * 15 13 12 38 38 H 1.09003 * 113.60756 * 254.52792 * 15 13 12 39 39 H 1.09001 * 109.47431 * 32.49733 * 18 16 15 40 40 H 1.08998 * 109.47282 * 152.49484 * 18 16 15 41 41 H 1.08002 * 126.90941 * 0.02562 * 20 19 18 42 42 H 1.08003 * 126.75077 * 180.02562 * 21 20 19 43 43 H 1.08995 * 113.62263 * 139.98247 * 24 16 15 44 44 H 1.09002 * 113.61165 * 270.88607 * 24 16 15 45 45 H 0.97002 * 125.67535 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 0.0005 5 8 2.2013 3.1602 1.2261 6 14 2.5905 3.4429 -1.4303 7 6 3.6269 0.6768 0.0055 8 6 4.8485 1.5593 0.0130 9 6 3.6122 -0.7018 -0.0009 10 6 4.7860 -1.5813 -0.0015 11 8 5.9050 -1.1029 -0.0013 12 7 4.6254 -2.9196 -0.0023 13 6 5.7978 -3.7980 -0.0034 14 1 6.6882 -3.3167 -0.4079 15 6 6.0373 -4.5075 1.3397 16 6 6.4073 -5.7574 0.5240 17 1 7.4644 -5.8118 0.2637 18 6 5.8737 -7.0602 1.1228 19 7 6.8379 -7.5819 2.0947 20 6 6.5753 -7.8872 3.3865 21 6 7.7403 -8.3309 3.9135 22 7 8.6469 -8.2755 2.9314 23 7 8.0794 -7.8325 1.8654 24 6 5.5248 -5.1890 -0.5997 25 7 2.2953 -1.1024 -0.0005 26 1 -0.3633 0.0938 1.0234 27 1 -0.3633 0.8393 -0.5929 28 1 -0.3633 -0.9332 -0.4304 29 1 0.7344 2.5545 -0.0967 30 1 3.1560 3.1765 1.3792 31 1 2.1306 4.8548 -1.4406 32 1 4.0711 3.3923 -1.3262 33 1 5.1457 1.7771 -1.0127 34 1 4.6205 2.4910 0.5309 35 1 5.6629 1.0481 0.5265 36 1 3.7335 -3.3010 -0.0028 37 1 5.1337 -4.6277 1.9372 38 1 6.8704 -4.0950 1.9089 39 1 4.9232 -6.8687 1.6209 40 1 5.7266 -7.7918 0.3284 41 1 5.6268 -7.7954 3.8948 42 1 7.9055 -8.6641 4.9274 43 1 5.9440 -5.3268 -1.5963 44 1 4.4809 -5.4956 -0.5324 45 1 1.9834 -2.0209 -0.0006 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_12297754.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:41 Heat of formation + Delta-G solvation = 99.998919 kcal Electronic energy + Delta-G solvation = -27984.018240 eV Core-core repulsion = 24006.930925 eV Total energy + Delta-G solvation = -3977.087315 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -44.17806 -42.68999 -41.03984 -39.42451 -37.91179 -35.87282 -34.54359 -33.78730 -32.78072 -31.96096 -29.66082 -29.31640 -27.55708 -26.81810 -26.49480 -24.59918 -23.60781 -22.73690 -22.01157 -21.12142 -20.74045 -20.12348 -19.24514 -18.65780 -17.83269 -17.62387 -16.94252 -16.82950 -16.52781 -16.36506 -15.84691 -15.77630 -15.55062 -15.30683 -15.02680 -14.82115 -14.55973 -14.40043 -14.29900 -13.74915 -13.69763 -13.54261 -13.52635 -13.41249 -13.18113 -13.02227 -12.72152 -12.62386 -12.43143 -12.38278 -12.03963 -11.85044 -11.64037 -11.60874 -11.07423 -10.90433 -10.75649 -10.33747 -10.22751 -9.57485 -8.97943 -4.87727 0.33585 0.68104 1.28430 1.50295 1.55128 1.61956 1.71026 1.94003 2.06768 2.14229 2.23570 3.28931 3.35282 3.48824 3.51998 3.65931 3.69391 3.79294 3.85861 3.94502 3.98062 4.05422 4.13295 4.28886 4.33753 4.36649 4.38596 4.48051 4.57767 4.59279 4.62117 4.66387 4.70489 4.79158 4.83747 4.90859 4.97192 4.98193 5.01023 5.10492 5.17983 5.26504 5.28738 5.46373 5.68465 5.71189 5.84288 6.37678 6.49059 6.55880 7.08428 7.53207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.101 3.899 3 C -0.223 4.223 4 C -0.036 4.036 5 O -0.550 6.550 6 Si 0.735 3.265 7 C -0.083 4.083 8 C -0.094 4.094 9 C -0.072 4.072 10 C 0.587 3.413 11 O -0.570 6.570 12 N -0.703 5.703 13 C 0.118 3.882 14 H 0.089 0.911 15 C -0.144 4.144 16 C -0.120 4.120 17 H 0.083 0.917 18 C 0.120 3.880 19 N -0.284 5.284 20 C -0.033 4.033 21 C -0.074 4.074 22 N -0.323 5.323 23 N -0.127 5.127 24 C -0.111 4.111 25 N -0.517 5.517 26 H 0.084 0.916 27 H 0.099 0.901 28 H 0.093 0.907 29 H 0.131 0.869 30 H 0.377 0.623 31 H -0.303 1.303 32 H -0.272 1.272 33 H 0.067 0.933 34 H 0.061 0.939 35 H 0.065 0.935 36 H 0.413 0.587 37 H 0.112 0.888 38 H 0.044 0.956 39 H 0.149 0.851 40 H 0.117 0.883 41 H 0.236 0.764 42 H 0.209 0.791 43 H 0.086 0.914 44 H 0.128 0.872 45 H 0.433 0.567 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.333 -4.944 -1.755 14.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.019 4.019 3 C -0.229 4.229 4 C -0.147 4.147 5 O -0.358 6.358 6 Si 0.640 3.360 7 C -0.092 4.092 8 C -0.151 4.151 9 C -0.184 4.184 10 C 0.377 3.623 11 O -0.450 6.450 12 N -0.354 5.354 13 C 0.013 3.987 14 H 0.107 0.893 15 C -0.183 4.183 16 C -0.140 4.140 17 H 0.102 0.898 18 C 0.001 3.999 19 N -0.078 5.078 20 C -0.185 4.185 21 C -0.232 4.232 22 N -0.188 5.188 23 N -0.107 5.107 24 C -0.150 4.150 25 N -0.115 5.115 26 H 0.102 0.898 27 H 0.118 0.882 28 H 0.112 0.888 29 H 0.148 0.852 30 H 0.226 0.774 31 H -0.231 1.231 32 H -0.197 1.197 33 H 0.085 0.915 34 H 0.080 0.920 35 H 0.084 0.916 36 H 0.251 0.749 37 H 0.130 0.870 38 H 0.063 0.937 39 H 0.167 0.833 40 H 0.135 0.865 41 H 0.252 0.748 42 H 0.226 0.774 43 H 0.104 0.896 44 H 0.147 0.853 45 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -11.525 -4.072 -3.054 12.599 hybrid contribution 0.110 -0.240 1.925 1.942 sum -11.415 -4.312 -1.130 12.254 Atomic orbital electron populations 1.20664 0.84713 1.05667 1.04364 1.20717 0.94881 0.84778 1.01544 1.19432 0.91977 0.95738 1.15757 1.24336 1.05473 0.90991 0.93868 1.86568 1.29101 1.80558 1.39586 0.94469 0.79485 0.77549 0.84476 1.19839 0.94911 0.92009 1.02462 1.20513 0.95045 0.97443 1.02075 1.19797 0.83769 0.93451 1.21383 1.17263 0.87097 0.82452 0.75534 1.90831 1.26035 1.75950 1.52163 1.45633 1.10330 1.04486 1.74924 1.22417 0.89249 0.89506 0.97496 0.89320 1.23607 1.02319 0.95373 0.96958 1.22561 1.00956 0.92392 0.98064 0.89812 1.22589 0.89976 0.95843 0.91515 1.47843 1.08743 1.40504 1.10725 1.24400 1.03863 1.05114 0.85130 1.24233 0.90190 1.06838 1.01971 1.75085 1.28820 1.16991 0.97903 1.78223 0.92474 1.18737 1.21248 1.23310 1.02125 0.91358 0.98193 1.41718 1.03943 1.09317 1.56570 0.89762 0.88197 0.88815 0.85180 0.77382 1.23138 1.19706 0.91468 0.91980 0.91615 0.74946 0.86981 0.93719 0.83349 0.86488 0.74766 0.77449 0.89565 0.85349 0.72533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 1.12 9.98 71.24 0.71 1.83 16 2 C 0.10 -0.51 7.13 41.34 0.29 -0.21 16 3 C -0.22 -0.07 4.66 -20.12 -0.09 -0.16 16 4 C -0.04 -0.01 2.86 71.23 0.20 0.20 16 5 O -0.55 -2.63 12.88 -148.98 -1.92 -4.55 16 6 Si 0.73 0.55 30.98 68.60 2.13 2.67 16 7 C -0.08 -0.36 5.82 -19.57 -0.11 -0.48 16 8 C -0.09 -0.63 7.72 71.24 0.55 -0.08 16 9 C -0.07 -0.10 7.06 40.35 0.28 0.19 16 10 C 0.59 2.18 7.79 86.45 0.67 2.86 16 11 O -0.57 -7.53 14.40 -4.35 -0.06 -7.59 16 12 N -0.70 3.84 5.35 -443.99 -2.38 1.46 16 13 C 0.12 -0.50 4.24 45.52 0.19 -0.30 16 14 H 0.09 0.27 7.46 -2.39 -0.02 0.25 16 15 C -0.14 0.77 7.43 31.12 0.23 1.00 16 16 C -0.12 0.85 3.84 -10.27 -0.04 0.81 16 17 H 0.08 -0.02 7.92 -2.39 -0.02 -0.04 16 18 C 0.12 -1.24 6.29 86.38 0.54 -0.70 16 19 N -0.28 0.24 3.44 -347.74 -1.20 -0.96 16 20 C -0.03 0.13 11.57 83.49 0.97 1.10 16 21 C -0.07 -0.20 12.05 83.73 1.01 0.81 16 22 N -0.32 -3.80 12.41 -58.26 -0.72 -4.52 16 23 N -0.13 -1.18 12.77 37.02 0.47 -0.71 16 24 C -0.11 1.26 7.39 31.12 0.23 1.49 16 25 N -0.52 3.53 5.99 -171.94 -1.03 2.50 16 26 H 0.08 -0.92 8.14 -2.39 -0.02 -0.94 16 27 H 0.10 -1.29 7.25 -2.39 -0.02 -1.30 16 28 H 0.09 -1.47 8.14 -2.39 -0.02 -1.49 16 29 H 0.13 -0.53 6.65 -2.39 -0.02 -0.54 16 30 H 0.38 0.68 6.57 -74.05 -0.49 0.19 16 31 H -0.30 -2.39 7.11 99.48 0.71 -1.68 16 32 H -0.27 -1.45 5.05 99.48 0.50 -0.95 16 33 H 0.07 0.52 7.14 -2.39 -0.02 0.50 16 34 H 0.06 0.25 5.09 -2.39 -0.01 0.24 16 35 H 0.06 0.70 6.49 -2.39 -0.02 0.69 16 36 H 0.41 -5.66 7.86 -92.71 -0.73 -6.39 16 37 H 0.11 -1.16 7.90 -2.39 -0.02 -1.18 16 38 H 0.04 0.08 8.14 -2.39 -0.02 0.06 16 39 H 0.15 -2.76 7.77 -2.39 -0.02 -2.77 16 40 H 0.12 -1.45 8.14 -2.39 -0.02 -1.47 16 41 H 0.24 -3.40 8.06 -2.91 -0.02 -3.43 16 42 H 0.21 -0.71 8.06 -2.91 -0.02 -0.73 16 43 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 44 H 0.13 -2.35 8.08 -2.39 -0.02 -2.37 16 45 H 0.43 -6.48 8.19 -92.71 -0.76 -7.24 16 Total: 0.00 -34.68 367.38 -0.15 -34.83 By element: Atomic # 1 Polarization: -30.40 SS G_CDS: -1.08 Total: -31.48 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: 5.64 Total: 8.35 kcal Atomic # 7 Polarization: 2.63 SS G_CDS: -4.85 Total: -2.22 kcal Atomic # 8 Polarization: -10.16 SS G_CDS: -1.98 Total: -12.14 kcal Atomic # 14 Polarization: 0.55 SS G_CDS: 2.13 Total: 2.67 kcal Total: -34.68 -0.15 -34.83 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12297754.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 134.829 kcal (2) G-P(sol) polarization free energy of solvation -34.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.145 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.146 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.830 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds