Wall clock time and date at job start Tue Mar 9 2021 13:24:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86309 * 109.46808 * 2 1 4 4 C 1.50694 * 109.47441 * 119.99817 * 2 1 3 5 5 C 1.38415 * 119.89374 * 245.00069 * 4 2 1 6 6 C 1.38244 * 120.34150 * 180.02562 * 5 4 2 7 7 C 1.38276 * 120.11683 * 0.04601 * 6 5 4 8 8 F 1.35104 * 120.11150 * 179.97438 * 7 6 5 9 9 C 1.39871 * 119.78189 * 0.25473 * 7 6 5 10 10 C 1.47687 * 120.16958 * 179.70573 * 9 7 6 11 11 O 1.21577 * 120.00081 * 359.97438 * 10 9 7 12 12 N 1.34773 * 120.00024 * 180.02562 * 10 9 7 13 13 C 1.46504 * 119.99996 * 180.02562 * 12 10 9 14 14 H 1.08994 * 112.84837 * 25.32351 * 13 12 10 15 15 C 1.53783 * 113.61449 * 156.52607 * 13 12 10 16 16 C 1.53789 * 87.07847 * 139.97792 * 15 13 12 17 17 H 1.08997 * 113.61392 * 89.20253 * 16 15 13 18 18 C 1.52999 * 113.61009 * 220.01717 * 16 15 13 19 19 N 1.46504 * 109.46869 * 185.00323 * 18 16 15 20 20 C 1.35312 * 125.86745 * 124.71812 * 19 18 16 21 21 C 1.35355 * 106.17214 * 179.90437 * 20 19 18 22 22 N 1.33775 * 106.49681 * 0.34963 * 21 20 19 23 23 N 1.28632 * 108.88713 * 359.77310 * 22 21 20 24 24 C 1.53787 * 113.61111 * 254.13370 * 13 12 10 25 25 C 1.37899 * 119.89079 * 65.02554 * 4 2 1 26 26 H 0.96697 * 113.99919 * 299.99389 * 1 2 3 27 27 H 1.08995 * 109.47133 * 240.00679 * 2 1 3 28 28 H 1.48492 * 109.99923 * 178.68441 * 3 2 1 29 29 H 1.48502 * 109.99970 * 300.00302 * 3 2 1 30 30 H 1.08004 * 119.83077 * 0.02562 * 5 4 2 31 31 H 1.07995 * 119.94591 * 180.02562 * 6 5 4 32 32 H 0.96995 * 120.00151 * 359.97438 * 12 10 9 33 33 H 1.08992 * 113.61510 * 254.52379 * 15 13 12 34 34 H 1.09000 * 113.61419 * 25.43049 * 15 13 12 35 35 H 1.08997 * 109.47550 * 304.99736 * 18 16 15 36 36 H 1.09001 * 109.47048 * 65.00264 * 18 16 15 37 37 H 1.07994 * 126.91351 * 0.02562 * 20 19 18 38 38 H 1.07994 * 126.75544 * 180.12228 * 21 20 19 39 39 H 1.09007 * 113.60967 * 334.56512 * 24 13 12 40 40 H 1.08994 * 113.61395 * 105.46594 * 24 13 12 41 41 H 1.08007 * 120.06026 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 2.6395 -0.0091 2.1910 6 6 3.1052 -0.6516 3.3231 7 6 2.8665 -2.0018 3.5022 8 9 3.3220 -2.6297 4.6084 9 6 2.1569 -2.7166 2.5317 10 6 1.9028 -4.1603 2.7113 11 8 2.3110 -4.7306 3.7044 12 7 1.2191 -4.8459 1.7737 13 6 0.9665 -6.2780 1.9521 14 1 0.9669 -6.5806 2.9992 15 6 -0.2489 -6.7921 1.1626 16 6 0.5830 -8.0479 0.8525 17 1 0.4780 -8.8362 1.5979 18 6 0.4120 -8.5580 -0.5798 19 7 1.1453 -9.8160 -0.7409 20 6 0.6241 -10.9877 -1.1727 21 6 1.6444 -11.8773 -1.1715 22 7 2.7237 -11.2169 -0.7374 23 7 2.3948 -9.9980 -0.4909 24 6 1.8342 -7.1733 1.0518 25 6 1.6846 -2.0570 1.3954 26 1 -0.3933 0.4416 0.7651 27 1 1.7924 -0.5137 -0.8900 28 1 3.5345 1.7705 0.0320 29 1 1.5614 2.4680 -1.2085 30 1 2.8293 1.0455 2.0555 31 1 3.6566 -0.0982 4.0687 32 1 0.8937 -4.3911 0.9812 33 1 -1.1219 -6.9894 1.7845 34 1 -0.4819 -6.1942 0.2815 35 1 -0.6458 -8.7257 -0.7820 36 1 0.8025 -7.8177 -1.2781 37 1 -0.3993 -11.1750 -1.4620 38 1 1.5958 -12.9167 -1.4604 39 1 2.1717 -6.6797 0.1404 40 1 2.6403 -7.6777 1.5846 41 1 1.1325 -2.6019 0.6439 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_12335834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:49 Heat of formation + Delta-G solvation = 52.575074 kcal Electronic energy + Delta-G solvation = -27542.351008 eV Core-core repulsion = 23342.028274 eV Total energy + Delta-G solvation = -4200.322734 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -49.87964 -44.14195 -41.57402 -40.57513 -39.36978 -37.62356 -35.85498 -34.49852 -32.65950 -32.36821 -31.92297 -29.61819 -26.96031 -26.78263 -25.98742 -24.57277 -23.55397 -23.13034 -22.19747 -21.65126 -20.94250 -19.28916 -18.71577 -18.38847 -18.34853 -17.61832 -17.24286 -16.93025 -16.84144 -16.36497 -16.26751 -16.02643 -15.92532 -15.74911 -15.70596 -15.34056 -14.96639 -14.57487 -14.45271 -14.37265 -13.89875 -13.81528 -13.69150 -13.40758 -13.18179 -12.91010 -12.60758 -12.44252 -12.32156 -12.15267 -12.00976 -11.88400 -11.56016 -11.09477 -10.99767 -10.63366 -10.46381 -10.30031 -10.14686 -9.88934 -5.20930 -0.55833 -0.15050 0.66988 1.08321 1.33321 1.46813 1.61204 1.71202 1.82263 1.93882 2.42970 2.97659 3.03973 3.17292 3.19272 3.29672 3.34935 3.42222 3.45530 3.50342 3.61493 3.79699 3.82839 3.87611 3.95589 3.99119 4.14078 4.22507 4.31966 4.38159 4.42961 4.49638 4.52198 4.61011 4.69606 4.73366 4.78676 4.81033 4.97959 4.98110 5.02889 5.25105 5.37605 5.49370 5.61283 6.31287 6.34883 7.08238 7.62056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.066 4.066 3 Si 0.686 3.314 4 C -0.141 4.141 5 C -0.058 4.058 6 C -0.156 4.156 7 C 0.168 3.832 8 F -0.110 7.110 9 C -0.175 4.175 10 C 0.560 3.440 11 O -0.518 6.518 12 N -0.715 5.715 13 C 0.124 3.876 14 H 0.120 0.880 15 C -0.134 4.134 16 C -0.122 4.122 17 H 0.104 0.896 18 C 0.126 3.874 19 N -0.291 5.291 20 C -0.053 4.053 21 C -0.051 4.051 22 N -0.273 5.273 23 N -0.078 5.078 24 C -0.139 4.139 25 C -0.031 4.031 26 H 0.381 0.619 27 H 0.117 0.883 28 H -0.255 1.255 29 H -0.252 1.252 30 H 0.142 0.858 31 H 0.150 0.850 32 H 0.400 0.600 33 H 0.085 0.915 34 H 0.093 0.907 35 H 0.110 0.890 36 H 0.101 0.899 37 H 0.190 0.810 38 H 0.190 0.810 39 H 0.089 0.911 40 H 0.082 0.918 41 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.279 4.949 -2.938 9.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.177 4.177 3 Si 0.587 3.413 4 C -0.142 4.142 5 C -0.076 4.076 6 C -0.175 4.175 7 C 0.147 3.853 8 F -0.088 7.088 9 C -0.179 4.179 10 C 0.347 3.653 11 O -0.393 6.393 12 N -0.367 5.367 13 C 0.020 3.980 14 H 0.137 0.863 15 C -0.173 4.173 16 C -0.142 4.142 17 H 0.122 0.878 18 C 0.005 3.995 19 N -0.085 5.085 20 C -0.204 4.204 21 C -0.209 4.209 22 N -0.139 5.139 23 N -0.058 5.058 24 C -0.178 4.178 25 C -0.050 4.050 26 H 0.229 0.771 27 H 0.135 0.865 28 H -0.179 1.179 29 H -0.176 1.176 30 H 0.159 0.841 31 H 0.168 0.832 32 H 0.236 0.764 33 H 0.104 0.896 34 H 0.112 0.888 35 H 0.128 0.872 36 H 0.120 0.880 37 H 0.207 0.793 38 H 0.207 0.793 39 H 0.108 0.892 40 H 0.101 0.899 41 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -5.088 5.457 -2.664 7.923 hybrid contribution -1.140 -1.030 -0.814 1.738 sum -6.228 4.428 -3.478 8.396 Atomic orbital electron populations 1.86517 1.16790 1.81678 1.49422 1.25038 0.85447 1.10272 0.96933 0.94791 0.81219 0.77541 0.87749 1.20325 1.01294 0.94627 0.97920 1.21079 0.94641 0.99729 0.92170 1.21182 1.03534 0.92631 1.00159 1.17763 0.93900 0.90428 0.83225 1.91638 1.85686 1.82263 1.49227 1.20079 1.05842 0.94549 0.97462 1.18008 0.78307 0.85896 0.83106 1.90883 1.49820 1.69976 1.28667 1.45822 1.57276 1.09905 1.23710 1.22517 0.95515 0.78954 1.01043 0.86258 1.23368 0.97567 0.95504 1.00871 1.22683 0.98809 0.97373 0.95302 0.87768 1.22182 0.96651 0.81968 0.98691 1.47538 1.08235 1.10506 1.42255 1.23744 1.02573 0.86108 1.07958 1.23691 0.89207 1.02014 1.05940 1.75178 1.25678 0.98322 1.14702 1.78359 0.94932 1.13465 1.19092 1.23558 0.97110 0.96441 1.00645 1.21008 0.95217 0.93781 0.94956 0.77118 0.86523 1.17937 1.17622 0.84070 0.83177 0.76355 0.89615 0.88831 0.87195 0.88038 0.79257 0.79314 0.89240 0.89910 0.84435 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.43 12.83 -35.23 -0.45 0.98 16 2 C -0.07 0.20 2.80 36.00 0.10 0.30 16 3 Si 0.69 -2.23 29.79 -169.99 -5.06 -7.30 16 4 C -0.14 0.35 5.35 -104.68 -0.56 -0.21 16 5 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 6 C -0.16 0.19 10.01 -39.56 -0.40 -0.20 16 7 C 0.17 0.29 7.29 -38.96 -0.28 0.01 16 8 F -0.11 -0.52 15.55 2.25 0.04 -0.48 16 9 C -0.18 -0.16 5.88 -104.91 -0.62 -0.78 16 10 C 0.56 1.42 7.77 -12.40 -0.10 1.33 16 11 O -0.52 -3.56 14.96 5.30 0.08 -3.48 16 12 N -0.72 0.76 5.31 -54.00 -0.29 0.47 16 13 C 0.12 -0.15 4.21 -67.11 -0.28 -0.44 16 14 H 0.12 0.10 7.50 -51.93 -0.39 -0.29 16 15 C -0.13 0.58 7.39 -25.91 -0.19 0.39 16 16 C -0.12 0.36 3.76 -89.71 -0.34 0.02 16 17 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 18 C 0.13 -0.45 6.29 -4.04 -0.03 -0.48 16 19 N -0.29 -0.08 3.44 -61.26 -0.21 -0.29 16 20 C -0.05 0.04 11.57 -17.05 -0.20 -0.15 16 21 C -0.05 -0.07 12.05 -17.73 -0.21 -0.29 16 22 N -0.27 -1.43 12.41 30.24 0.38 -1.06 16 23 N -0.08 -0.33 12.93 60.35 0.78 0.45 16 24 C -0.14 0.14 7.45 -25.82 -0.19 -0.06 16 25 C -0.03 0.06 9.17 -39.19 -0.36 -0.30 16 26 H 0.38 -2.39 8.70 45.56 0.40 -2.00 16 27 H 0.12 -0.33 7.96 -51.93 -0.41 -0.75 16 28 H -0.25 0.20 7.11 56.52 0.40 0.60 16 29 H -0.25 -0.09 7.11 56.52 0.40 0.32 16 30 H 0.14 -0.73 4.88 -52.48 -0.26 -0.99 16 31 H 0.15 -0.47 8.06 -52.49 -0.42 -0.89 16 32 H 0.40 -1.57 6.74 -40.82 -0.28 -1.84 16 33 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 34 H 0.09 -0.57 8.07 -51.93 -0.42 -0.98 16 35 H 0.11 -0.70 8.07 -51.93 -0.42 -1.12 16 36 H 0.10 -0.45 7.85 -51.93 -0.41 -0.85 16 37 H 0.19 -0.94 8.06 -52.49 -0.42 -1.36 16 38 H 0.19 -0.29 8.06 -52.49 -0.42 -0.71 16 39 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 40 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 41 H 0.14 -0.54 6.41 -52.48 -0.34 -0.88 16 LS Contribution 353.77 15.07 5.33 5.33 Total: 0.00 -12.34 353.77 -8.07 -20.41 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: -4.66 Total: -13.99 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -3.99 Total: -1.04 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: 0.66 Total: -0.43 kcal Atomic # 8 Polarization: -2.12 SS G_CDS: -0.37 Total: -2.49 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -2.23 SS G_CDS: -5.06 Total: -7.30 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -12.34 -8.07 -20.41 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12335834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.983 kcal (2) G-P(sol) polarization free energy of solvation -12.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.408 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds