Wall clock time and date at job start Tue Mar 9 2021 13:24:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.47308 * 2 1 4 4 C 1.50698 * 109.47379 * 239.99354 * 2 1 3 5 5 C 1.38227 * 120.00254 * 300.00304 * 4 2 1 6 6 C 1.38241 * 120.00180 * 179.97438 * 5 4 2 7 7 C 1.38236 * 119.99392 * 359.95886 * 6 5 4 8 8 C 1.50706 * 119.99406 * 180.02562 * 7 6 5 9 9 C 1.50700 * 109.47282 * 90.00161 * 8 7 6 10 10 O 1.21280 * 119.99942 * 359.97438 * 9 8 7 11 11 N 1.34772 * 120.00036 * 180.02562 * 9 8 7 12 12 C 1.46501 * 120.00042 * 179.97438 * 11 9 8 13 13 H 1.08998 * 112.84866 * 23.80678 * 12 11 9 14 14 C 1.53787 * 113.61128 * 154.99929 * 12 11 9 15 15 C 1.53784 * 87.07923 * 139.98386 * 14 12 11 16 16 H 1.09002 * 113.61478 * 89.11632 * 15 14 12 17 17 C 1.52994 * 113.61233 * 220.01769 * 15 14 12 18 18 N 1.46502 * 109.47057 * 185.00081 * 17 15 14 19 19 C 1.35310 * 125.86875 * 124.71827 * 18 17 15 20 20 C 1.35358 * 106.17236 * 179.90468 * 19 18 17 21 21 N 1.33769 * 106.49933 * 0.34983 * 20 19 18 22 22 N 1.28636 * 108.88179 * 359.77373 * 21 20 19 23 23 C 1.53779 * 87.08045 * 334.56667 * 15 14 12 24 24 C 1.38231 * 120.00629 * 0.27291 * 7 6 5 25 25 C 1.38241 * 119.99797 * 359.51548 * 24 7 6 26 26 H 0.96697 * 113.99638 * 60.00121 * 1 2 3 27 27 H 1.09002 * 109.46996 * 119.99582 * 2 1 3 28 28 H 1.48501 * 110.00076 * 59.99642 * 3 2 1 29 29 H 1.48500 * 110.00525 * 181.31571 * 3 2 1 30 30 H 1.08000 * 120.00099 * 359.97438 * 5 4 2 31 31 H 1.08001 * 120.00261 * 179.97438 * 6 5 4 32 32 H 1.08999 * 109.47353 * 329.99475 * 8 7 6 33 33 H 1.09002 * 109.47011 * 209.99805 * 8 7 6 34 34 H 0.97005 * 119.99829 * 359.97438 * 11 9 8 35 35 H 1.09004 * 113.61202 * 254.53139 * 14 12 11 36 36 H 1.08994 * 113.61447 * 25.43570 * 14 12 11 37 37 H 1.08994 * 109.47510 * 304.99618 * 17 15 14 38 38 H 1.09001 * 109.47575 * 65.00169 * 17 15 14 39 39 H 1.07993 * 126.91606 * 0.02562 * 19 18 17 40 40 H 1.07999 * 126.74659 * 180.12267 * 20 19 18 41 41 H 1.09006 * 113.61307 * 270.88660 * 23 15 14 42 42 H 1.09007 * 113.61642 * 139.98417 * 23 15 14 43 43 H 1.07993 * 120.00124 * 179.72600 * 24 7 6 44 44 H 1.07994 * 120.00215 * 180.24772 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 1.5975 -2.0339 -1.4490 6 6 2.0579 -2.6855 -2.5779 7 6 2.8516 -2.0133 -3.4885 8 6 3.3531 -2.7235 -4.7195 9 6 2.3594 -2.5504 -5.8392 10 8 1.3437 -1.9135 -5.6555 11 7 2.5988 -3.1043 -7.0443 12 6 1.6326 -2.9365 -8.1326 13 1 1.0058 -2.0533 -8.0097 14 6 2.2550 -3.0601 -9.5334 15 6 0.9917 -3.8370 -9.9402 16 1 0.1885 -3.2008 -10.3119 17 6 1.2746 -5.0327 -10.8518 18 7 0.0077 -5.6322 -11.2782 19 6 -0.3801 -5.8399 -12.5578 20 6 -1.6052 -6.4119 -12.4923 21 7 -1.9061 -6.5176 -11.1931 22 7 -0.9300 -6.0469 -10.5001 23 6 0.8420 -4.2150 -8.4571 24 6 3.1895 -0.6913 -3.2674 25 6 2.7254 -0.0384 -2.1407 26 1 -0.3932 0.4417 -0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7703 -0.0320 30 1 0.9769 -2.5589 -0.7379 31 1 1.7974 -3.7197 -2.7486 32 1 3.4748 -3.7847 -4.5025 33 1 4.3128 -2.3011 -5.0170 34 1 3.4110 -3.6140 -7.1910 35 1 2.3651 -2.1055 -10.0480 36 1 3.1637 -3.6615 -9.5559 37 1 1.8311 -4.6984 -11.7273 38 1 1.8622 -5.7729 -10.3086 39 1 0.1765 -5.5997 -13.4514 40 1 -2.2203 -6.7189 -13.3252 41 1 1.3645 -5.1322 -8.1854 42 1 -0.1886 -4.1929 -8.1027 43 1 3.8132 -0.1675 -3.9766 44 1 2.9861 0.9956 -1.9700 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_12335836.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:53 Heat of formation + Delta-G solvation = 87.918170 kcal Electronic energy + Delta-G solvation = -26485.494173 eV Core-core repulsion = 22600.620386 eV Total energy + Delta-G solvation = -3884.873786 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.153 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -44.15163 -41.43810 -40.57930 -39.46317 -37.55924 -35.81957 -34.37394 -33.86922 -31.93424 -31.90252 -30.20858 -29.23069 -26.95576 -25.99646 -24.54363 -23.77702 -23.54105 -22.58838 -21.92384 -21.49812 -20.82814 -18.78580 -18.38725 -18.08828 -17.66112 -17.14650 -16.87928 -16.62127 -16.34057 -16.16919 -15.99029 -15.86124 -15.58407 -15.32786 -15.00056 -14.68552 -14.54732 -14.39535 -13.98749 -13.91776 -13.70934 -13.47118 -13.25257 -13.02403 -12.83674 -12.60649 -12.41645 -12.19367 -12.12996 -11.91107 -11.88427 -11.64103 -11.56070 -11.05021 -10.87585 -10.38021 -10.30943 -10.10563 -9.82519 -9.56942 -4.98759 0.27784 0.50549 0.66053 1.32547 1.34334 1.61218 1.65842 1.70294 1.99757 2.08398 2.81119 3.03829 3.19361 3.36600 3.45648 3.49794 3.57967 3.60745 3.76217 3.80395 3.84068 3.88369 3.91626 4.01765 4.05156 4.13245 4.24221 4.31075 4.36386 4.42293 4.49027 4.49603 4.53955 4.56200 4.69982 4.72154 4.78304 4.97047 5.00114 5.06509 5.10779 5.24194 5.40527 5.43538 5.58758 5.60407 5.61571 6.03741 6.40804 6.63552 7.19719 7.61102 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.688 3.312 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.064 4.064 8 C -0.104 4.104 9 C 0.515 3.485 10 O -0.524 6.524 11 N -0.724 5.724 12 C 0.124 3.876 13 H 0.118 0.882 14 C -0.135 4.135 15 C -0.123 4.123 16 H 0.103 0.897 17 C 0.126 3.874 18 N -0.291 5.291 19 C -0.054 4.054 20 C -0.051 4.051 21 N -0.273 5.273 22 N -0.078 5.078 23 C -0.139 4.139 24 C -0.100 4.100 25 C -0.116 4.116 26 H 0.380 0.620 27 H 0.113 0.887 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.126 0.874 31 H 0.122 0.878 32 H 0.105 0.895 33 H 0.105 0.895 34 H 0.401 0.599 35 H 0.083 0.917 36 H 0.093 0.907 37 H 0.109 0.891 38 H 0.101 0.899 39 H 0.190 0.810 40 H 0.190 0.810 41 H 0.089 0.911 42 H 0.080 0.920 43 H 0.124 0.876 44 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.459 0.616 -6.689 10.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.591 3.409 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.121 4.121 7 C -0.065 4.065 8 C -0.144 4.144 9 C 0.302 3.698 10 O -0.399 6.399 11 N -0.376 5.376 12 C 0.019 3.981 13 H 0.135 0.865 14 C -0.174 4.174 15 C -0.142 4.142 16 H 0.121 0.879 17 C 0.005 3.995 18 N -0.085 5.085 19 C -0.204 4.204 20 C -0.208 4.208 21 N -0.139 5.139 22 N -0.059 5.059 23 C -0.178 4.178 24 C -0.118 4.118 25 C -0.133 4.133 26 H 0.227 0.773 27 H 0.130 0.870 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.144 0.856 31 H 0.140 0.860 32 H 0.123 0.877 33 H 0.123 0.877 34 H 0.236 0.764 35 H 0.102 0.898 36 H 0.111 0.889 37 H 0.127 0.873 38 H 0.120 0.880 39 H 0.207 0.793 40 H 0.207 0.793 41 H 0.107 0.893 42 H 0.099 0.901 43 H 0.142 0.858 44 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 6.853 1.209 -4.082 8.068 hybrid contribution 0.994 -0.811 -1.324 1.844 sum 7.847 0.398 -5.407 9.537 Atomic orbital electron populations 1.86490 1.17066 1.81755 1.49294 1.25051 0.85311 1.10066 0.97513 0.94617 0.80855 0.78371 0.87094 1.20330 0.99215 0.95313 0.97044 1.20959 0.98677 0.93855 0.97378 1.21023 0.96984 1.00024 0.94100 1.19259 0.98239 0.94269 0.94699 1.20701 0.98857 1.02964 0.91857 1.20609 0.87363 0.78613 0.83261 1.90763 1.27618 1.39559 1.81946 1.45976 1.24512 1.55730 1.11344 1.22454 0.91342 0.99580 0.84721 0.86457 1.23373 0.97005 1.01185 0.95830 1.22657 0.99816 0.96103 0.95649 0.87864 1.22183 0.80648 0.95657 1.00996 1.47536 1.15703 1.40092 1.05185 1.23746 0.99476 1.07798 0.89406 1.23693 0.96260 1.04887 0.95998 1.75179 1.18709 1.16537 1.03452 1.78354 0.93888 1.13807 1.19803 1.23518 1.02359 0.98246 0.93634 1.20896 0.99952 0.93822 0.97139 1.20941 0.98482 0.99203 0.94699 0.77267 0.86988 1.18013 1.18343 0.85605 0.85997 0.87725 0.87707 0.76428 0.89830 0.88898 0.87259 0.88047 0.79265 0.79314 0.89290 0.90084 0.85825 0.85666 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.90 12.77 -35.23 -0.45 -1.35 16 2 C -0.07 -0.07 2.82 36.00 0.10 0.03 16 3 Si 0.69 -0.05 29.79 -169.99 -5.06 -5.12 16 4 C -0.12 -0.18 5.39 -104.63 -0.56 -0.74 16 5 C -0.09 -0.18 9.61 -39.58 -0.38 -0.56 16 6 C -0.10 -0.15 9.70 -39.58 -0.38 -0.53 16 7 C -0.06 -0.05 4.37 -104.62 -0.46 -0.51 16 8 C -0.10 0.22 5.83 -29.03 -0.17 0.05 16 9 C 0.52 0.10 7.82 -10.99 -0.09 0.01 16 10 O -0.52 -2.56 15.63 5.56 0.09 -2.48 16 11 N -0.72 1.95 5.35 -53.02 -0.28 1.67 16 12 C 0.12 -0.26 4.24 -67.12 -0.28 -0.55 16 13 H 0.12 0.02 7.46 -51.93 -0.39 -0.36 16 14 C -0.14 0.67 7.39 -25.91 -0.19 0.47 16 15 C -0.12 0.42 3.76 -89.81 -0.34 0.08 16 16 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 17 C 0.13 -0.51 6.29 -4.04 -0.03 -0.53 16 18 N -0.29 0.02 3.44 -61.27 -0.21 -0.19 16 19 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 20 C -0.05 -0.06 12.05 -17.73 -0.21 -0.27 16 21 N -0.27 -1.35 12.41 30.24 0.38 -0.97 16 22 N -0.08 -0.30 12.93 60.35 0.78 0.48 16 23 C -0.14 0.23 7.43 -25.92 -0.19 0.04 16 24 C -0.10 -0.07 9.70 -39.58 -0.38 -0.46 16 25 C -0.12 -0.10 8.67 -39.58 -0.34 -0.44 16 26 H 0.38 -0.69 8.70 45.56 0.40 -0.29 16 27 H 0.11 0.13 7.96 -51.93 -0.41 -0.28 16 28 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 29 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 30 H 0.13 0.19 8.06 -52.49 -0.42 -0.23 16 31 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 32 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 33 H 0.10 -0.46 8.08 -51.93 -0.42 -0.88 16 34 H 0.40 -2.30 8.73 -40.82 -0.36 -2.66 16 35 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 36 H 0.09 -0.62 8.08 -51.93 -0.42 -1.04 16 37 H 0.11 -0.74 8.07 -51.93 -0.42 -1.16 16 38 H 0.10 -0.49 7.84 -51.93 -0.41 -0.90 16 39 H 0.19 -0.99 8.06 -52.49 -0.42 -1.41 16 40 H 0.19 -0.34 8.06 -52.49 -0.42 -0.76 16 41 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 42 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 43 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 44 H 0.13 -0.12 4.88 -52.49 -0.26 -0.38 16 LS Contribution 373.71 15.07 5.63 5.63 Total: 0.00 -12.08 373.71 -9.34 -21.41 By element: Atomic # 1 Polarization: -8.96 SS G_CDS: -6.09 Total: -15.05 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -4.11 Total: -4.04 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: 0.66 Total: 0.99 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -0.36 Total: -3.83 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.06 Total: -5.12 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -12.08 -9.34 -21.41 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12335836.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.331 kcal (2) G-P(sol) polarization free energy of solvation -12.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.255 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.413 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds