Wall clock time and date at job start Tue Mar 9 2021 13:25:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.46920 * 2 1 4 4 C 1.50703 * 109.47178 * 119.99744 * 2 1 3 5 5 C 1.37813 * 119.93969 * 15.28259 * 4 2 1 6 6 C 1.39672 * 119.87771 * 180.27174 * 5 4 2 7 7 C 1.47730 * 120.11552 * 179.74565 * 6 5 4 8 8 O 1.21563 * 120.00145 * 359.72435 * 7 6 5 9 9 N 1.34777 * 119.99572 * 179.72130 * 7 6 5 10 10 C 1.46499 * 119.99665 * 179.72382 * 9 7 6 11 11 H 1.08998 * 112.85361 * 336.47110 * 10 9 7 12 12 C 1.53778 * 113.61557 * 107.77998 * 10 9 7 13 13 C 1.53785 * 87.08457 * 139.98112 * 12 10 9 14 14 H 1.08997 * 113.61414 * 89.11579 * 13 12 10 15 15 C 1.52995 * 113.69293 * 220.01437 * 13 12 10 16 16 N 1.46504 * 109.46802 * 272.52972 * 15 13 12 17 17 C 1.35320 * 125.86308 * 124.71374 * 16 15 13 18 18 C 1.35354 * 106.17054 * 179.90772 * 17 16 15 19 19 N 1.33770 * 106.49756 * 0.35111 * 18 17 16 20 20 N 1.28633 * 108.88719 * 359.77578 * 19 18 17 21 21 C 1.53786 * 113.61394 * 205.27970 * 10 9 7 22 22 C 1.39631 * 119.76537 * 359.46708 * 6 5 4 23 23 C 1.37854 * 119.87855 * 0.25527 * 22 6 5 24 24 C 1.38637 * 120.11912 * 359.97438 * 23 22 6 25 25 F 1.35097 * 119.88191 * 179.97438 * 24 23 22 26 26 H 0.96698 * 114.00104 * 299.99400 * 1 2 3 27 27 H 1.08994 * 109.47151 * 239.99872 * 2 1 3 28 28 H 1.48506 * 109.99937 * 178.68034 * 3 2 1 29 29 H 1.48494 * 110.00044 * 299.99892 * 3 2 1 30 30 H 1.08000 * 120.06543 * 359.97438 * 5 4 2 31 31 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 32 32 H 1.08997 * 113.61721 * 254.52733 * 12 10 9 33 33 H 1.09004 * 113.61436 * 25.43627 * 12 10 9 34 34 H 1.08997 * 109.47576 * 32.52960 * 15 13 12 35 35 H 1.09000 * 109.47801 * 152.53522 * 15 13 12 36 36 H 1.07991 * 126.91775 * 0.02562 * 17 16 15 37 37 H 1.07993 * 126.75333 * 180.12411 * 18 17 16 38 38 H 1.08999 * 113.61272 * 334.56869 * 21 10 9 39 39 H 1.09001 * 113.61514 * 105.47520 * 21 10 9 40 40 H 1.07998 * 120.05863 * 180.27157 * 22 6 5 41 41 H 1.07998 * 119.94489 * 179.97438 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0745 -1.4992 1.9673 6 6 1.5400 -2.1524 3.1107 7 6 0.6247 -2.9948 3.9076 8 8 -0.5372 -3.1163 3.5714 9 7 1.0778 -3.6285 5.0074 10 6 0.1687 -4.4590 5.8010 11 1 -0.8777 -4.1815 5.6740 12 6 0.4295 -5.9677 5.6582 13 6 0.1620 -6.0772 7.1686 14 1 -0.8866 -6.2436 7.4154 15 6 1.1029 -7.0433 7.8912 16 7 0.5473 -8.3979 7.8375 17 6 1.1774 -9.4947 7.3567 18 6 0.3078 -10.5220 7.4998 19 7 -0.7999 -10.0087 8.0466 20 7 -0.6260 -8.7481 8.2343 21 6 0.5931 -4.6046 7.2720 22 6 2.8751 -2.0111 3.4947 23 6 3.7250 -1.2242 2.7472 24 6 3.2566 -0.5742 1.6158 25 9 4.0936 0.1961 0.8870 26 1 -0.3933 0.4416 0.7651 27 1 1.7923 -0.5138 -0.8899 28 1 3.5346 1.7703 0.0321 29 1 1.5614 2.4679 -1.2085 30 1 0.0437 -1.6082 1.6639 31 1 2.0049 -3.5313 5.2759 32 1 -0.3103 -6.4827 5.0454 33 1 1.4549 -6.2090 5.3778 34 1 2.0788 -7.0314 7.4058 35 1 1.2108 -6.7359 8.9314 36 1 2.1742 -9.5414 6.9439 37 1 0.4740 -11.5526 7.2232 38 1 1.6631 -4.4731 7.4327 39 1 -0.0147 -4.0192 7.9618 40 1 3.2411 -2.5176 4.3755 41 1 4.7577 -1.1139 3.0434 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:39 Heat of formation + Delta-G solvation = 60.075677 kcal Electronic energy + Delta-G solvation = -27256.712570 eV Core-core repulsion = 23056.715087 eV Total energy + Delta-G solvation = -4199.997484 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.45064 -44.16536 -41.70225 -40.56439 -39.29985 -37.75538 -35.90797 -34.53143 -32.78136 -32.04503 -31.94836 -29.65964 -27.25713 -27.06548 -25.79709 -24.15680 -23.57882 -23.37425 -22.36658 -21.66275 -20.84670 -19.39456 -18.88547 -18.78625 -18.05627 -17.81664 -17.59011 -17.17385 -16.91155 -16.60449 -16.15427 -16.02077 -15.86770 -15.83455 -15.36978 -15.26194 -15.13670 -14.81187 -14.78377 -14.14099 -13.91923 -13.80305 -13.67924 -13.55359 -13.21505 -12.85525 -12.74064 -12.49588 -12.41013 -12.19064 -11.83220 -11.79243 -11.39609 -11.13786 -10.99744 -10.93088 -10.32741 -10.29786 -10.15825 -9.80352 -5.06934 -0.60766 -0.11763 0.64969 1.16768 1.31156 1.54561 1.61538 1.69229 1.88007 1.97730 2.48315 2.88066 3.02900 3.10324 3.13210 3.23540 3.26407 3.41283 3.48280 3.53722 3.56595 3.70151 3.76547 3.81534 3.98405 4.02851 4.12182 4.28183 4.29537 4.30620 4.38777 4.45178 4.51065 4.63402 4.64697 4.71910 4.75095 4.77732 4.91111 4.93550 4.99738 5.23453 5.29420 5.47545 5.58658 6.25545 6.39154 7.01331 7.59386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.682 3.318 4 C -0.154 4.154 5 C -0.019 4.019 6 C -0.143 4.143 7 C 0.562 3.438 8 O -0.526 6.526 9 N -0.717 5.717 10 C 0.127 3.873 11 H 0.122 0.878 12 C -0.149 4.149 13 C -0.124 4.124 14 H 0.115 0.885 15 C 0.127 3.873 16 N -0.289 5.289 17 C -0.052 4.052 18 C -0.051 4.051 19 N -0.271 5.271 20 N -0.083 5.083 21 C -0.135 4.135 22 C -0.060 4.060 23 C -0.152 4.152 24 C 0.119 3.881 25 F -0.120 7.120 26 H 0.382 0.618 27 H 0.123 0.877 28 H -0.228 1.228 29 H -0.258 1.258 30 H 0.156 0.844 31 H 0.400 0.600 32 H 0.077 0.923 33 H 0.088 0.912 34 H 0.107 0.893 35 H 0.104 0.896 36 H 0.190 0.810 37 H 0.190 0.810 38 H 0.092 0.908 39 H 0.087 0.913 40 H 0.137 0.863 41 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.317 2.514 3.540 8.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.176 4.176 3 Si 0.582 3.418 4 C -0.156 4.156 5 C -0.038 4.038 6 C -0.146 4.146 7 C 0.350 3.650 8 O -0.403 6.403 9 N -0.368 5.368 10 C 0.022 3.978 11 H 0.140 0.860 12 C -0.188 4.188 13 C -0.144 4.144 14 H 0.133 0.867 15 C 0.006 3.994 16 N -0.083 5.083 17 C -0.203 4.203 18 C -0.208 4.208 19 N -0.137 5.137 20 N -0.064 5.064 21 C -0.173 4.173 22 C -0.078 4.078 23 C -0.171 4.171 24 C 0.099 3.901 25 F -0.099 7.099 26 H 0.230 0.770 27 H 0.140 0.860 28 H -0.152 1.152 29 H -0.183 1.183 30 H 0.174 0.826 31 H 0.236 0.764 32 H 0.096 0.904 33 H 0.107 0.893 34 H 0.125 0.875 35 H 0.122 0.878 36 H 0.207 0.793 37 H 0.207 0.793 38 H 0.111 0.889 39 H 0.106 0.894 40 H 0.155 0.845 41 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 5.756 3.231 2.923 7.219 hybrid contribution 2.006 -0.923 -0.666 2.306 sum 7.761 2.308 2.257 8.406 Atomic orbital electron populations 1.86524 1.16558 1.81443 1.49517 1.25016 0.85669 1.10327 0.96590 0.95250 0.81713 0.76443 0.88412 1.20386 0.92766 1.02146 1.00256 1.20986 1.00998 0.90829 0.90979 1.19971 0.94221 1.02264 0.98190 1.18172 0.87349 0.79050 0.80447 1.90833 1.17702 1.62600 1.69129 1.45859 1.13950 1.49840 1.27192 1.22470 0.96141 0.89358 0.89828 0.86015 1.23612 1.02927 0.96763 0.95474 1.22748 1.01364 0.94202 0.96082 0.86705 1.22174 0.97185 0.76186 1.03883 1.47501 1.11340 1.09816 1.39665 1.23712 1.02518 0.86796 1.07232 1.23687 0.91021 1.01336 1.04776 1.75168 1.23077 1.00158 1.15277 1.78304 1.00285 1.09069 1.18692 1.23374 1.02591 0.94839 0.96531 1.21146 0.91885 0.96164 0.98636 1.21093 1.01751 0.99256 0.94962 1.17781 0.87598 0.93087 0.91598 1.91586 1.71022 1.71482 1.75800 0.77046 0.85960 1.15225 1.18292 0.82625 0.76368 0.90435 0.89341 0.87480 0.87797 0.79340 0.79314 0.88919 0.89422 0.84546 0.83581 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.02 11.64 -35.23 -0.41 -0.39 16 2 C -0.07 0.02 2.96 36.01 0.11 0.13 16 3 Si 0.68 -0.56 30.81 -169.99 -5.24 -5.80 16 4 C -0.15 0.08 5.12 -104.61 -0.54 -0.46 16 5 C -0.02 0.00 8.78 -39.20 -0.34 -0.34 16 6 C -0.14 0.14 5.87 -104.96 -0.62 -0.47 16 7 C 0.56 0.17 7.77 -12.38 -0.10 0.07 16 8 O -0.53 -2.33 15.94 5.31 0.08 -2.25 16 9 N -0.72 2.17 5.31 -54.00 -0.29 1.88 16 10 C 0.13 -0.35 4.24 -67.12 -0.28 -0.63 16 11 H 0.12 -0.06 7.46 -51.93 -0.39 -0.45 16 12 C -0.15 0.44 7.43 -25.92 -0.19 0.25 16 13 C -0.12 0.46 3.83 -89.80 -0.34 0.11 16 14 H 0.11 -0.17 7.91 -51.93 -0.41 -0.58 16 15 C 0.13 -0.54 6.30 -4.04 -0.03 -0.56 16 16 N -0.29 0.06 3.44 -61.26 -0.21 -0.15 16 17 C -0.05 0.06 11.57 -17.04 -0.20 -0.13 16 18 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 19 N -0.27 -1.31 12.41 30.23 0.38 -0.94 16 20 N -0.08 -0.31 12.76 60.35 0.77 0.46 16 21 C -0.13 0.70 7.39 -25.91 -0.19 0.51 16 22 C -0.06 0.20 9.54 -39.20 -0.37 -0.17 16 23 C -0.15 0.39 10.01 -39.57 -0.40 -0.01 16 24 C 0.12 -0.07 6.67 -39.27 -0.26 -0.33 16 25 F -0.12 -0.10 12.82 2.25 0.03 -0.07 16 26 H 0.38 -1.49 8.44 45.56 0.38 -1.10 16 27 H 0.12 0.01 7.96 -51.93 -0.41 -0.40 16 28 H -0.23 -0.30 5.27 56.52 0.30 0.00 16 29 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 30 H 0.16 0.08 6.67 -52.49 -0.35 -0.27 16 31 H 0.40 -2.44 6.76 -40.82 -0.28 -2.71 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.09 -0.38 7.90 -51.93 -0.41 -0.79 16 34 H 0.11 -0.75 7.77 -51.93 -0.40 -1.15 16 35 H 0.10 -0.52 8.14 -51.93 -0.42 -0.95 16 36 H 0.19 -0.99 8.06 -52.49 -0.42 -1.41 16 37 H 0.19 -0.34 8.06 -52.49 -0.42 -0.77 16 38 H 0.09 -0.67 8.08 -51.93 -0.42 -1.09 16 39 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 40 H 0.14 -0.92 6.40 -52.49 -0.34 -1.25 16 41 H 0.15 -0.65 8.06 -52.49 -0.42 -1.07 16 LS Contribution 350.99 15.07 5.29 5.29 Total: 0.00 -11.41 350.99 -8.43 -19.84 By element: Atomic # 1 Polarization: -10.70 SS G_CDS: -4.86 Total: -15.56 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -3.97 Total: -2.31 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: 0.65 Total: 1.26 kcal Atomic # 8 Polarization: -2.32 SS G_CDS: -0.33 Total: -2.64 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.03 Total: -0.07 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.24 Total: -5.80 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -11.41 -8.43 -19.84 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.915 kcal (2) G-P(sol) polarization free energy of solvation -11.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.501 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.840 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.076 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds