Wall clock time and date at job start Tue Mar 9 2021 13:25:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.46920 * 2 1 4 4 C 1.50703 * 109.47178 * 119.99744 * 2 1 3 5 5 C 1.37813 * 119.93969 * 15.28259 * 4 2 1 6 6 C 1.39672 * 119.87771 * 180.27174 * 5 4 2 7 7 C 1.47730 * 120.11552 * 179.74565 * 6 5 4 8 8 O 1.21563 * 120.00145 * 359.72435 * 7 6 5 9 9 N 1.34777 * 119.99572 * 179.72130 * 7 6 5 10 10 C 1.46499 * 119.99665 * 179.72382 * 9 7 6 11 11 H 1.08998 * 112.85361 * 336.47110 * 10 9 7 12 12 C 1.53778 * 113.61557 * 107.77998 * 10 9 7 13 13 C 1.53785 * 87.08457 * 139.98112 * 12 10 9 14 14 H 1.08997 * 113.61414 * 89.11579 * 13 12 10 15 15 C 1.52995 * 113.69293 * 220.01437 * 13 12 10 16 16 N 1.46504 * 109.46802 * 272.52972 * 15 13 12 17 17 C 1.35320 * 125.86308 * 124.71374 * 16 15 13 18 18 C 1.35354 * 106.17054 * 179.90772 * 17 16 15 19 19 N 1.33770 * 106.49756 * 0.35111 * 18 17 16 20 20 N 1.28633 * 108.88719 * 359.77578 * 19 18 17 21 21 C 1.53786 * 113.61394 * 205.27970 * 10 9 7 22 22 C 1.39631 * 119.76537 * 359.46708 * 6 5 4 23 23 C 1.37854 * 119.87855 * 0.25527 * 22 6 5 24 24 C 1.38637 * 120.11912 * 359.97438 * 23 22 6 25 25 F 1.35097 * 119.88191 * 179.97438 * 24 23 22 26 26 H 0.96698 * 114.00104 * 299.99400 * 1 2 3 27 27 H 1.08994 * 109.47151 * 239.99872 * 2 1 3 28 28 H 1.48506 * 109.99937 * 178.68034 * 3 2 1 29 29 H 1.48494 * 110.00044 * 299.99892 * 3 2 1 30 30 H 1.08000 * 120.06543 * 359.97438 * 5 4 2 31 31 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 32 32 H 1.08997 * 113.61721 * 254.52733 * 12 10 9 33 33 H 1.09004 * 113.61436 * 25.43627 * 12 10 9 34 34 H 1.08997 * 109.47576 * 32.52960 * 15 13 12 35 35 H 1.09000 * 109.47801 * 152.53522 * 15 13 12 36 36 H 1.07991 * 126.91775 * 0.02562 * 17 16 15 37 37 H 1.07993 * 126.75333 * 180.12411 * 18 17 16 38 38 H 1.08999 * 113.61272 * 334.56869 * 21 10 9 39 39 H 1.09001 * 113.61514 * 105.47520 * 21 10 9 40 40 H 1.07998 * 120.05863 * 180.27157 * 22 6 5 41 41 H 1.07998 * 119.94489 * 179.97438 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0745 -1.4992 1.9673 6 6 1.5400 -2.1524 3.1107 7 6 0.6247 -2.9948 3.9076 8 8 -0.5372 -3.1163 3.5714 9 7 1.0778 -3.6285 5.0074 10 6 0.1687 -4.4590 5.8010 11 1 -0.8777 -4.1815 5.6740 12 6 0.4295 -5.9677 5.6582 13 6 0.1620 -6.0772 7.1686 14 1 -0.8866 -6.2436 7.4154 15 6 1.1029 -7.0433 7.8912 16 7 0.5473 -8.3979 7.8375 17 6 1.1774 -9.4947 7.3567 18 6 0.3078 -10.5220 7.4998 19 7 -0.7999 -10.0087 8.0466 20 7 -0.6260 -8.7481 8.2343 21 6 0.5931 -4.6046 7.2720 22 6 2.8751 -2.0111 3.4947 23 6 3.7250 -1.2242 2.7472 24 6 3.2566 -0.5742 1.6158 25 9 4.0936 0.1961 0.8870 26 1 -0.3933 0.4416 0.7651 27 1 1.7923 -0.5138 -0.8899 28 1 3.5346 1.7703 0.0321 29 1 1.5614 2.4679 -1.2085 30 1 0.0437 -1.6082 1.6639 31 1 2.0049 -3.5313 5.2759 32 1 -0.3103 -6.4827 5.0454 33 1 1.4549 -6.2090 5.3778 34 1 2.0788 -7.0314 7.4058 35 1 1.2108 -6.7359 8.9314 36 1 2.1742 -9.5414 6.9439 37 1 0.4740 -11.5526 7.2232 38 1 1.6631 -4.4731 7.4327 39 1 -0.0147 -4.0192 7.9618 40 1 3.2411 -2.5176 4.3755 41 1 4.7577 -1.1139 3.0434 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:38 Heat of formation + Delta-G solvation = 56.766032 kcal Electronic energy + Delta-G solvation = -27256.856087 eV Core-core repulsion = 23056.715087 eV Total energy + Delta-G solvation = -4200.141001 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -50.41440 -44.14671 -41.59815 -40.38067 -39.24686 -37.70667 -35.82337 -34.47262 -32.65940 -31.94662 -31.89717 -29.47807 -27.17841 -26.75657 -25.68564 -24.07581 -23.52182 -23.24458 -22.26958 -21.57671 -20.61303 -19.26588 -18.80872 -18.65125 -17.93812 -17.76556 -17.49164 -17.12983 -16.84314 -16.39781 -16.10701 -15.95753 -15.80898 -15.76896 -15.26375 -15.11525 -15.01016 -14.73232 -14.61122 -14.02968 -13.76593 -13.62081 -13.47103 -13.40625 -13.04015 -12.77077 -12.67609 -12.39194 -12.33289 -11.98864 -11.81176 -11.56230 -11.43661 -11.16712 -10.93857 -10.86126 -10.30797 -10.20978 -10.01802 -9.70069 -5.05186 -0.50092 0.03762 0.71251 1.20229 1.53858 1.59005 1.61588 1.64613 1.93539 2.04596 2.59249 3.00523 3.24789 3.33641 3.35064 3.40674 3.52885 3.62566 3.69478 3.71627 3.77397 4.00848 4.03094 4.09011 4.10857 4.32429 4.35070 4.36767 4.42642 4.56834 4.65542 4.69754 4.77344 4.80650 4.84974 4.91242 4.96790 5.02760 5.05219 5.10223 5.19077 5.29519 5.51916 5.62676 5.74781 6.46514 6.59416 7.13702 7.56182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.073 4.073 3 Si 0.763 3.237 4 C -0.158 4.158 5 C -0.032 4.032 6 C -0.151 4.151 7 C 0.559 3.441 8 O -0.580 6.580 9 N -0.695 5.695 10 C 0.117 3.883 11 H 0.088 0.912 12 C -0.145 4.145 13 C -0.122 4.122 14 H 0.082 0.918 15 C 0.119 3.881 16 N -0.284 5.284 17 C -0.033 4.033 18 C -0.075 4.075 19 N -0.324 5.324 20 N -0.128 5.128 21 C -0.111 4.111 22 C -0.041 4.041 23 C -0.145 4.145 24 C 0.104 3.896 25 F -0.131 7.131 26 H 0.396 0.604 27 H 0.113 0.887 28 H -0.254 1.254 29 H -0.306 1.306 30 H 0.139 0.861 31 H 0.420 0.580 32 H 0.043 0.957 33 H 0.115 0.885 34 H 0.150 0.850 35 H 0.117 0.883 36 H 0.236 0.764 37 H 0.208 0.792 38 H 0.131 0.869 39 H 0.086 0.914 40 H 0.180 0.820 41 H 0.173 0.827 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.951 2.482 5.101 12.333 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.182 4.182 3 Si 0.667 3.333 4 C -0.159 4.159 5 C -0.051 4.051 6 C -0.154 4.154 7 C 0.347 3.653 8 O -0.461 6.461 9 N -0.347 5.347 10 C 0.011 3.989 11 H 0.106 0.894 12 C -0.183 4.183 13 C -0.142 4.142 14 H 0.101 0.899 15 C 0.000 4.000 16 N -0.078 5.078 17 C -0.185 4.185 18 C -0.233 4.233 19 N -0.189 5.189 20 N -0.107 5.107 21 C -0.150 4.150 22 C -0.059 4.059 23 C -0.163 4.163 24 C 0.085 3.915 25 F -0.110 7.110 26 H 0.247 0.753 27 H 0.130 0.870 28 H -0.179 1.179 29 H -0.234 1.234 30 H 0.157 0.843 31 H 0.260 0.740 32 H 0.062 0.938 33 H 0.133 0.867 34 H 0.168 0.832 35 H 0.135 0.865 36 H 0.253 0.747 37 H 0.225 0.775 38 H 0.149 0.851 39 H 0.104 0.896 40 H 0.197 0.803 41 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges 9.401 3.203 4.550 10.924 hybrid contribution 0.912 -0.926 -1.198 1.767 sum 10.313 2.277 3.353 11.081 Atomic orbital electron populations 1.86477 1.16885 1.81936 1.50709 1.25090 0.85595 1.10855 0.96658 0.94349 0.78767 0.74318 0.85848 1.20252 0.93083 1.02521 1.00086 1.20893 1.00475 0.91752 0.91934 1.19970 0.95251 1.02286 0.97880 1.18448 0.86792 0.79053 0.80998 1.90814 1.20020 1.64597 1.70651 1.45690 1.14798 1.48443 1.25803 1.22425 0.94901 0.89602 0.91934 0.89392 1.23620 1.03351 0.95891 0.95458 1.22576 1.00118 0.95842 0.95619 0.89945 1.22613 0.98252 0.74004 1.05130 1.47859 1.10366 1.11388 1.38161 1.24405 1.03506 0.85489 1.05068 1.24229 0.90824 1.03106 1.05167 1.75084 1.25445 1.01139 1.17215 1.78217 1.02554 1.08966 1.20957 1.23323 1.04720 0.92991 0.93940 1.21520 0.90178 0.94981 0.99233 1.21422 1.03038 0.98108 0.93747 1.18042 0.87326 0.93689 0.92482 1.91555 1.71219 1.71950 1.76279 0.75310 0.86969 1.17910 1.23435 0.84312 0.74040 0.93803 0.86702 0.83224 0.86524 0.74728 0.77521 0.85113 0.89575 0.80320 0.80976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.97 11.64 -148.98 -1.73 -2.70 16 2 C -0.07 -0.05 2.96 71.24 0.21 0.16 16 3 Si 0.76 -0.35 30.81 68.60 2.11 1.77 16 4 C -0.16 0.06 5.12 -19.86 -0.10 -0.04 16 5 C -0.03 -0.02 8.78 22.52 0.20 0.18 16 6 C -0.15 0.40 5.87 -20.09 -0.12 0.28 16 7 C 0.56 0.43 7.77 86.75 0.67 1.10 16 8 O -0.58 -6.50 15.94 -3.91 -0.06 -6.57 16 9 N -0.70 5.34 5.31 -443.02 -2.35 2.99 16 10 C 0.12 -0.67 4.24 45.52 0.19 -0.47 16 11 H 0.09 0.13 7.46 -2.39 -0.02 0.12 16 12 C -0.14 0.94 7.43 31.12 0.23 1.18 16 13 C -0.12 0.98 3.83 -10.26 -0.04 0.94 16 14 H 0.08 -0.08 7.91 -2.39 -0.02 -0.10 16 15 C 0.12 -1.32 6.30 86.38 0.54 -0.77 16 16 N -0.28 0.38 3.44 -347.73 -1.20 -0.81 16 17 C -0.03 0.14 11.57 83.49 0.97 1.11 16 18 C -0.08 -0.17 12.05 83.73 1.01 0.84 16 19 N -0.32 -3.70 12.41 -58.26 -0.72 -4.43 16 20 N -0.13 -1.13 12.76 37.02 0.47 -0.66 16 21 C -0.11 1.40 7.39 31.13 0.23 1.63 16 22 C -0.04 0.40 9.54 22.52 0.21 0.61 16 23 C -0.14 1.12 10.01 22.27 0.22 1.34 16 24 C 0.10 -0.19 6.67 22.47 0.15 -0.04 16 25 F -0.13 -0.20 12.82 44.97 0.58 0.37 16 26 H 0.40 -2.42 8.44 -74.06 -0.62 -3.04 16 27 H 0.11 0.25 7.96 -2.39 -0.02 0.23 16 28 H -0.25 -0.89 5.27 99.48 0.52 -0.37 16 29 H -0.31 -2.24 7.11 99.48 0.71 -1.54 16 30 H 0.14 0.52 6.67 -2.91 -0.02 0.50 16 31 H 0.42 -6.80 6.76 -92.71 -0.63 -7.42 16 32 H 0.04 0.03 8.14 -2.39 -0.02 0.01 16 33 H 0.11 -1.36 7.90 -2.39 -0.02 -1.38 16 34 H 0.15 -2.91 7.77 -2.39 -0.02 -2.93 16 35 H 0.12 -1.51 8.14 -2.39 -0.02 -1.53 16 36 H 0.24 -3.53 8.06 -2.92 -0.02 -3.55 16 37 H 0.21 -0.75 8.06 -2.91 -0.02 -0.77 16 38 H 0.13 -2.58 8.08 -2.39 -0.02 -2.60 16 39 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 40 H 0.18 -3.37 6.40 -2.91 -0.02 -3.39 16 41 H 0.17 -2.21 8.06 -2.91 -0.02 -2.23 16 Total: 0.00 -34.38 350.99 1.38 -32.99 By element: Atomic # 1 Polarization: -30.68 SS G_CDS: -0.30 Total: -30.98 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: 4.58 Total: 8.03 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -3.80 Total: -2.90 kcal Atomic # 8 Polarization: -7.47 SS G_CDS: -1.80 Total: -9.27 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.58 Total: 0.37 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: 2.11 Total: 1.77 kcal Total: -34.38 1.38 -32.99 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.759 kcal (2) G-P(sol) polarization free energy of solvation -34.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.993 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds