Wall clock time and date at job start Tue Mar 9 2021 13:26:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86296 * 109.47062 * 2 1 4 4 C 1.50699 * 109.47319 * 119.99959 * 2 1 3 5 5 C 1.38897 * 119.67918 * 245.00341 * 4 2 1 6 6 C 1.36468 * 120.61790 * 180.02562 * 5 4 2 7 7 C 1.40066 * 119.83045 * 359.96821 * 6 5 4 8 8 C 1.41588 * 133.38292 * 179.97438 * 7 6 5 9 9 C 1.35862 * 107.73149 * 180.02562 * 8 7 6 10 10 C 1.47064 * 125.42776 * 180.02562 * 9 8 7 11 11 O 1.21639 * 120.00005 * 359.97438 * 10 9 8 12 12 N 1.34775 * 119.99849 * 179.97438 * 10 9 8 13 13 C 1.46498 * 119.99871 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.84766 * 23.81274 * 13 12 10 15 15 C 1.53787 * 113.61259 * 155.00381 * 13 12 10 16 16 C 1.53775 * 87.07963 * 139.98357 * 15 13 12 17 17 H 1.09006 * 113.61770 * 89.19940 * 16 15 13 18 18 C 1.52999 * 113.61509 * 220.02005 * 16 15 13 19 19 N 1.46495 * 109.47327 * 185.00213 * 18 16 15 20 20 C 1.35319 * 125.87355 * 124.71422 * 19 18 16 21 21 C 1.35345 * 106.17653 * 179.90688 * 20 19 18 22 22 N 1.33769 * 106.50082 * 0.34614 * 21 20 19 23 23 N 1.28635 * 108.88202 * 359.78075 * 22 21 20 24 24 C 1.53781 * 87.08578 * 334.56632 * 16 15 13 25 25 N 1.38146 * 109.14648 * 0.02562 * 9 8 7 26 26 C 1.37495 * 108.79143 * 359.97438 * 25 9 8 27 27 C 1.37716 * 119.67370 * 64.73117 * 4 2 1 28 28 H 0.96703 * 113.99900 * 299.99615 * 1 2 3 29 29 H 1.09003 * 109.47013 * 239.99802 * 2 1 3 30 30 H 1.48501 * 110.00019 * 299.99928 * 3 2 1 31 31 H 1.48497 * 110.00303 * 61.31930 * 3 2 1 32 32 H 1.08004 * 119.69012 * 0.02562 * 5 4 2 33 33 H 1.08002 * 120.08649 * 179.97438 * 6 5 4 34 34 H 1.08002 * 126.13679 * 0.02955 * 8 7 6 35 35 H 0.97005 * 120.00347 * 0.02562 * 12 10 9 36 36 H 1.09003 * 113.61240 * 254.53107 * 15 13 12 37 37 H 1.08997 * 113.61429 * 25.43294 * 15 13 12 38 38 H 1.09008 * 109.46989 * 304.99962 * 18 16 15 39 39 H 1.08997 * 109.47248 * 64.99984 * 18 16 15 40 40 H 1.08001 * 126.90489 * 0.02562 * 20 19 18 41 41 H 1.08003 * 126.74850 * 180.12643 * 21 20 19 42 42 H 1.08999 * 113.61484 * 270.89086 * 24 16 15 43 43 H 1.09000 * 113.61495 * 139.97831 * 24 16 15 44 44 H 0.97000 * 125.60614 * 179.97438 * 25 9 8 45 45 H 1.08004 * 120.09519 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6414 -0.0024 2.1916 6 6 3.1056 -0.6266 3.3129 7 6 2.8649 -1.9937 3.4994 8 6 3.2031 -2.9097 4.5248 9 6 2.7043 -4.1243 4.1756 10 6 2.8321 -5.3577 4.9664 11 8 3.4250 -5.3406 6.0283 12 7 2.2922 -6.5068 4.5144 13 6 2.4199 -7.7356 5.3018 14 1 2.5818 -7.5436 6.3624 15 6 1.3101 -8.7633 5.0241 16 6 2.3999 -9.8451 5.1059 17 1 2.5564 -10.2320 6.1129 18 6 2.2440 -10.9523 4.0616 19 7 3.2516 -11.9896 4.2955 20 6 3.0051 -13.3074 4.4796 21 6 4.2112 -13.8954 4.6571 22 7 5.1240 -12.9205 4.5816 23 7 4.5233 -11.8035 4.3668 24 6 3.4039 -8.7531 4.7006 25 7 2.0580 -4.0161 2.9595 26 6 2.1448 -2.7141 2.5261 27 6 1.6771 -2.0540 1.3935 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5879 2.4586 1.2242 32 1 2.8278 1.0520 2.0503 33 1 3.6571 -0.0679 4.0545 34 1 3.7580 -2.6835 5.4233 35 1 1.8196 -6.5205 3.6673 36 1 0.5679 -8.8301 5.8197 37 1 0.8636 -8.6672 4.0344 38 1 1.2482 -11.3887 4.1405 39 1 2.3789 -10.5330 3.0646 40 1 2.0402 -13.7925 4.4822 41 1 4.3993 -14.9448 4.8296 42 1 3.5299 -8.6541 3.6225 43 1 4.3521 -8.8116 5.2350 44 1 1.6157 -4.7397 2.4886 45 1 1.1199 -2.5948 0.6428 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_13158378.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:26:05 Heat of formation + Delta-G solvation = 129.116203 kcal Electronic energy + Delta-G solvation = -29323.285650 eV Core-core repulsion = 25118.320153 eV Total energy + Delta-G solvation = -4204.965497 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -44.17962 -42.73711 -41.25575 -39.75646 -38.93295 -37.00064 -35.93252 -34.45543 -33.30596 -31.96109 -31.22147 -30.45383 -29.71042 -27.12318 -27.03006 -25.26631 -24.04739 -23.56506 -23.12118 -22.29169 -21.95881 -21.53277 -20.91472 -19.53003 -18.79153 -18.53253 -17.95386 -17.55980 -17.01051 -16.90866 -16.53230 -16.35426 -16.22723 -15.94835 -15.68528 -15.57918 -15.51222 -15.12041 -14.91735 -14.76687 -14.53924 -14.43867 -14.08056 -13.95494 -13.77401 -13.39543 -13.17018 -12.65690 -12.60465 -12.59572 -12.51872 -12.22630 -12.05810 -11.93282 -11.62967 -11.57022 -11.28429 -11.05850 -10.96953 -10.63772 -10.33616 -10.31297 -9.36531 -8.86110 -4.95346 -0.37794 0.49022 0.63140 0.96124 1.26185 1.28954 1.59889 1.67869 1.71135 1.86393 1.96802 2.20250 2.73713 2.97595 3.10901 3.27301 3.33274 3.39949 3.50852 3.55595 3.58434 3.67662 3.74675 3.81483 3.91900 3.98118 4.10533 4.19950 4.25431 4.28722 4.33362 4.38285 4.41989 4.44825 4.47978 4.58751 4.62965 4.73266 4.86426 4.90220 4.91100 4.94207 5.20094 5.21806 5.33219 5.37117 5.49648 5.57348 5.57767 5.92994 6.13381 6.28655 6.36511 6.93198 7.58443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.075 4.075 3 Si 0.691 3.309 4 C -0.085 4.085 5 C -0.148 4.148 6 C -0.050 4.050 7 C -0.116 4.116 8 C -0.098 4.098 9 C 0.012 3.988 10 C 0.587 3.413 11 O -0.514 6.514 12 N -0.719 5.719 13 C 0.124 3.876 14 H 0.123 0.877 15 C -0.135 4.135 16 C -0.122 4.122 17 H 0.105 0.895 18 C 0.126 3.874 19 N -0.292 5.292 20 C -0.053 4.053 21 C -0.051 4.051 22 N -0.272 5.272 23 N -0.079 5.079 24 C -0.139 4.139 25 N -0.579 5.579 26 C 0.116 3.884 27 C -0.104 4.104 28 H 0.377 0.623 29 H 0.118 0.882 30 H -0.258 1.258 31 H -0.259 1.259 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.159 0.841 35 H 0.396 0.604 36 H 0.085 0.915 37 H 0.092 0.908 38 H 0.110 0.890 39 H 0.101 0.899 40 H 0.190 0.810 41 H 0.190 0.810 42 H 0.089 0.911 43 H 0.084 0.916 44 H 0.417 0.583 45 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.227 -1.440 -2.397 5.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.185 4.185 3 Si 0.592 3.408 4 C -0.087 4.087 5 C -0.166 4.166 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.125 4.125 9 C -0.097 4.097 10 C 0.373 3.627 11 O -0.389 6.389 12 N -0.370 5.370 13 C 0.019 3.981 14 H 0.140 0.860 15 C -0.174 4.174 16 C -0.141 4.141 17 H 0.123 0.877 18 C 0.005 3.995 19 N -0.086 5.086 20 C -0.204 4.204 21 C -0.208 4.208 22 N -0.138 5.138 23 N -0.059 5.059 24 C -0.177 4.177 25 N -0.184 5.184 26 C 0.006 3.994 27 C -0.125 4.125 28 H 0.224 0.776 29 H 0.136 0.864 30 H -0.184 1.184 31 H -0.184 1.184 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.176 0.824 35 H 0.230 0.770 36 H 0.104 0.896 37 H 0.111 0.889 38 H 0.128 0.872 39 H 0.119 0.881 40 H 0.207 0.793 41 H 0.207 0.793 42 H 0.108 0.892 43 H 0.102 0.898 44 H 0.254 0.746 45 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -3.835 -0.020 -2.249 4.446 hybrid contribution -2.629 -1.561 -0.136 3.060 sum -6.464 -1.580 -2.386 7.069 Atomic orbital electron populations 1.86600 1.17673 1.80043 1.49384 1.25049 0.83976 1.11202 0.98248 0.94771 0.91689 0.74222 0.80079 1.19970 0.98733 0.93481 0.96549 1.20537 1.01362 0.99863 0.94848 1.20386 0.97504 0.91934 0.97052 1.18234 1.03657 0.94378 0.95816 1.20994 1.01797 0.89919 0.99815 1.20084 1.04938 0.95958 0.88716 1.17225 0.78799 0.81761 0.84888 1.90889 1.41353 1.84942 1.21700 1.45839 1.57741 1.08819 1.24579 1.22560 0.96378 0.81403 0.97709 0.85964 1.23382 0.96700 0.93813 1.03526 1.22652 0.98569 0.93197 0.99725 0.87675 1.22170 0.89415 0.87045 1.00852 1.47523 1.07360 1.07729 1.45953 1.23748 1.02636 0.84414 1.09604 1.23693 0.88872 1.01312 1.06903 1.75181 1.27312 0.95419 1.15898 1.78355 0.88547 1.20256 1.18708 1.23529 0.98800 0.93318 1.02086 1.41873 1.49054 1.08968 1.18486 1.18307 1.00672 0.83909 0.96548 1.19863 1.02657 0.93906 0.96028 0.77567 0.86382 1.18354 1.18428 0.85277 0.84997 0.82355 0.76960 0.89585 0.88945 0.87212 0.88081 0.79256 0.79289 0.89241 0.89767 0.74566 0.85580 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.30 12.82 -35.23 -0.45 -0.75 16 2 C -0.07 0.06 2.79 36.01 0.10 0.17 16 3 Si 0.69 -0.96 29.85 -169.99 -5.07 -6.04 16 4 C -0.09 0.03 5.36 -104.57 -0.56 -0.53 16 5 C -0.15 0.08 8.59 -39.98 -0.34 -0.26 16 6 C -0.05 0.00 10.06 -39.53 -0.40 -0.40 16 7 C -0.12 -0.15 6.16 -106.93 -0.66 -0.81 16 8 C -0.10 -0.16 10.53 -39.16 -0.41 -0.57 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.56 16 10 C 0.59 0.80 7.80 -12.68 -0.10 0.70 16 11 O -0.51 -2.70 16.44 5.24 0.09 -2.61 16 12 N -0.72 1.59 5.35 -54.20 -0.29 1.30 16 13 C 0.12 -0.28 4.24 -67.11 -0.28 -0.56 16 14 H 0.12 -0.03 7.46 -51.93 -0.39 -0.42 16 15 C -0.14 0.69 7.39 -25.92 -0.19 0.50 16 16 C -0.12 0.45 3.76 -89.81 -0.34 0.11 16 17 H 0.11 -0.25 8.14 -51.93 -0.42 -0.68 16 18 C 0.13 -0.53 6.29 -4.04 -0.03 -0.56 16 19 N -0.29 0.08 3.44 -61.26 -0.21 -0.13 16 20 C -0.05 0.07 11.57 -17.05 -0.20 -0.13 16 21 C -0.05 -0.05 12.05 -17.74 -0.21 -0.27 16 22 N -0.27 -1.30 12.41 30.23 0.38 -0.93 16 23 N -0.08 -0.29 12.93 60.35 0.78 0.50 16 24 C -0.14 0.27 7.43 -25.92 -0.19 0.08 16 25 N -0.58 0.74 6.07 -7.35 -0.04 0.69 16 26 C 0.12 0.06 7.25 -83.97 -0.61 -0.55 16 27 C -0.10 0.01 9.68 -39.42 -0.38 -0.38 16 28 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 29 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 30 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 31 H -0.26 -0.13 7.00 56.52 0.40 0.27 16 32 H 0.13 -0.28 4.78 -52.48 -0.25 -0.53 16 33 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 34 H 0.16 0.17 8.06 -52.49 -0.42 -0.25 16 35 H 0.40 -2.05 7.78 -40.82 -0.32 -2.37 16 36 H 0.09 -0.44 8.14 -51.93 -0.42 -0.87 16 37 H 0.09 -0.63 8.08 -51.93 -0.42 -1.05 16 38 H 0.11 -0.76 8.07 -51.92 -0.42 -1.18 16 39 H 0.10 -0.51 7.84 -51.93 -0.41 -0.92 16 40 H 0.19 -1.01 8.06 -52.49 -0.42 -1.43 16 41 H 0.19 -0.36 8.06 -52.48 -0.42 -0.79 16 42 H 0.09 -0.21 7.90 -51.93 -0.41 -0.62 16 43 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 44 H 0.42 -1.88 8.12 -40.82 -0.33 -2.21 16 45 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 LS Contribution 382.75 15.07 5.77 5.77 Total: 0.00 -12.01 382.75 -9.99 -21.99 By element: Atomic # 1 Polarization: -10.21 SS G_CDS: -5.55 Total: -15.76 kcal Atomic # 6 Polarization: 1.35 SS G_CDS: -5.38 Total: -4.03 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: 0.61 Total: 1.43 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.37 Total: -3.36 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.07 Total: -6.04 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -12.01 -9.99 -21.99 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13158378.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 151.109 kcal (2) G-P(sol) polarization free energy of solvation -12.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 139.102 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.992 kcal (6) G-S(sol) free energy of system = (1) + (5) 129.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds