Wall clock time and date at job start Tue Mar 9 2021 13:26:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86307 * 109.47258 * 2 1 4 4 C 1.50691 * 109.47153 * 240.00090 * 2 1 3 5 5 C 1.38588 * 120.32682 * 300.02327 * 4 2 1 6 6 C 1.38634 * 118.48822 * 179.72653 * 5 4 2 7 7 C 1.39261 * 119.06314 * 0.51310 * 6 5 4 8 8 C 1.48171 * 119.72397 * 179.74846 * 7 6 5 9 9 O 1.21513 * 119.99744 * 359.73133 * 8 7 6 10 10 N 1.34773 * 119.99665 * 179.72392 * 8 7 6 11 11 C 1.46508 * 119.99594 * 180.02562 * 10 8 7 12 12 H 1.09006 * 112.85122 * 336.19708 * 11 10 8 13 13 C 1.53779 * 113.69115 * 107.46541 * 11 10 8 14 14 C 1.53784 * 87.08045 * 139.99342 * 13 11 10 15 15 H 1.08994 * 113.61477 * 89.11454 * 14 13 11 16 16 C 1.52997 * 113.61270 * 220.02125 * 14 13 11 17 17 N 1.46498 * 109.47070 * 272.49429 * 16 14 13 18 18 C 1.35323 * 125.86761 * 124.99944 * 17 16 14 19 19 C 1.35350 * 106.17320 * 180.02562 * 18 17 16 20 20 N 1.33775 * 106.50089 * 359.97438 * 19 18 17 21 21 N 1.28644 * 108.88136 * 359.73575 * 20 19 18 22 22 C 1.53779 * 113.61245 * 205.00346 * 11 10 8 23 23 N 1.32748 * 120.55424 * 359.47467 * 7 6 5 24 24 C 1.31494 * 121.64083 * 0.25570 * 23 7 6 25 25 H 0.96697 * 114.00208 * 59.99726 * 1 2 3 26 26 H 1.09004 * 109.47070 * 119.99661 * 2 1 3 27 27 H 1.48499 * 109.99986 * 298.68203 * 3 2 1 28 28 H 1.48503 * 109.99870 * 60.00181 * 3 2 1 29 29 H 1.07999 * 120.75370 * 359.97150 * 5 4 2 30 30 H 1.07997 * 120.46534 * 180.26415 * 6 5 4 31 31 H 0.96996 * 120.00779 * 0.02562 * 10 8 7 32 32 H 1.09002 * 113.61557 * 25.44454 * 13 11 10 33 33 H 1.09004 * 113.61501 * 254.53874 * 13 11 10 34 34 H 1.08998 * 109.47573 * 32.49481 * 16 14 13 35 35 H 1.09003 * 109.47157 * 152.50001 * 16 14 13 36 36 H 1.07993 * 126.91161 * 359.97438 * 18 17 16 37 37 H 1.08004 * 126.74827 * 179.97438 * 19 18 17 38 38 H 1.08997 * 113.61646 * 105.38794 * 22 11 10 39 39 H 1.09000 * 113.61527 * 334.48065 * 22 11 10 40 40 H 1.08005 * 119.54694 * 180.02562 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2304 5 6 1.6002 -2.0369 -1.4567 6 6 2.0783 -2.6514 -2.6038 7 6 2.8792 -1.9215 -3.4786 8 6 3.4027 -2.5653 -4.7061 9 8 3.1368 -3.7270 -4.9435 10 7 4.1737 -1.8624 -5.5593 11 6 4.6908 -2.4989 -6.7733 12 1 4.7516 -3.5840 -6.6894 13 6 4.0051 -2.0183 -8.0631 14 6 5.3959 -2.0445 -8.7189 15 1 5.6493 -3.0053 -9.1668 16 6 5.6535 -0.8636 -9.6569 17 7 5.1694 -1.1922 -11.0000 18 6 4.2880 -0.4650 -11.7250 19 6 4.1240 -1.1275 -12.8938 20 7 4.9032 -2.2129 -12.8279 21 7 5.5138 -2.2189 -11.6956 22 6 5.9778 -1.8495 -7.3088 23 7 3.1730 -0.6520 -3.2246 24 6 2.7285 -0.0433 -2.1472 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5138 0.8900 27 1 1.5879 2.4586 -1.2242 28 1 1.5615 2.4679 1.2085 29 1 0.9806 -2.5785 -0.7574 30 1 1.8364 -3.6827 -2.8139 31 1 4.3861 -0.9352 -5.3697 32 1 3.5784 -1.0183 -7.9842 33 1 3.3099 -2.7443 -8.4846 34 1 5.1277 0.0163 -9.2863 35 1 6.7232 -0.6578 -9.6966 36 1 3.8107 0.4577 -11.4299 37 1 3.4890 -0.8370 -13.7177 38 1 6.8751 -2.4393 -7.1215 39 1 6.0904 -0.8035 -7.0237 40 1 2.9881 0.9907 -1.9743 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_13287726.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:26:22 Heat of formation + Delta-G solvation = 106.239709 kcal Electronic energy + Delta-G solvation = -24881.352980 eV Core-core repulsion = 21087.385383 eV Total energy + Delta-G solvation = -3793.967596 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.132 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -44.13308 -41.99332 -40.99818 -39.51914 -38.12731 -35.86081 -34.56767 -33.62227 -33.04354 -31.92485 -29.74227 -27.95610 -27.00472 -25.26253 -24.98574 -23.76725 -23.48717 -22.41099 -21.74088 -20.93379 -19.23950 -18.83035 -18.70215 -17.95124 -17.50212 -16.91170 -16.73722 -16.60282 -16.48288 -16.17539 -16.10708 -15.84029 -15.26888 -15.09453 -14.92483 -14.48313 -14.44453 -14.39738 -13.84380 -13.72907 -13.57846 -13.19770 -12.78513 -12.70712 -12.45553 -12.22302 -12.13735 -11.80025 -11.74444 -11.37420 -11.19699 -10.95892 -10.85145 -10.71321 -10.42259 -10.29119 -10.12895 -5.16883 -0.65770 -0.02690 0.68189 1.02195 1.34700 1.38942 1.54128 1.71857 1.78168 1.91525 2.60277 2.84321 3.08274 3.10119 3.17310 3.31672 3.34049 3.50045 3.57745 3.58182 3.65776 3.75798 3.84312 3.86437 4.04601 4.08211 4.15519 4.27850 4.33010 4.38246 4.45383 4.50396 4.51602 4.68262 4.77389 4.79211 4.82139 4.87956 5.03856 5.26210 5.27000 5.37839 5.61972 6.13924 6.23435 6.53429 7.04670 7.62216 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.074 4.074 3 Si 0.686 3.314 4 C -0.148 4.148 5 C -0.053 4.053 6 C -0.107 4.107 7 C 0.079 3.921 8 C 0.574 3.426 9 O -0.526 6.526 10 N -0.701 5.701 11 C 0.124 3.876 12 H 0.121 0.879 13 C -0.149 4.149 14 C -0.124 4.124 15 H 0.115 0.885 16 C 0.127 3.873 17 N -0.289 5.289 18 C -0.052 4.052 19 C -0.051 4.051 20 N -0.272 5.272 21 N -0.084 5.084 22 C -0.133 4.133 23 N -0.454 5.454 24 C 0.104 3.896 25 H 0.378 0.622 26 H 0.126 0.874 27 H -0.255 1.255 28 H -0.251 1.251 29 H 0.148 0.852 30 H 0.153 0.847 31 H 0.412 0.588 32 H 0.089 0.911 33 H 0.076 0.924 34 H 0.108 0.892 35 H 0.104 0.896 36 H 0.190 0.810 37 H 0.190 0.810 38 H 0.087 0.913 39 H 0.094 0.906 40 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.335 6.788 4.199 8.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.185 4.185 3 Si 0.586 3.414 4 C -0.150 4.150 5 C -0.079 4.079 6 C -0.128 4.128 7 C -0.059 4.059 8 C 0.359 3.641 9 O -0.402 6.402 10 N -0.352 5.352 11 C 0.019 3.981 12 H 0.139 0.861 13 C -0.187 4.187 14 C -0.144 4.144 15 H 0.133 0.867 16 C 0.005 3.995 17 N -0.083 5.083 18 C -0.202 4.202 19 C -0.209 4.209 20 N -0.137 5.137 21 N -0.064 5.064 22 C -0.172 4.172 23 N -0.165 5.165 24 C -0.056 4.056 25 H 0.226 0.774 26 H 0.144 0.856 27 H -0.180 1.180 28 H -0.176 1.176 29 H 0.166 0.834 30 H 0.170 0.830 31 H 0.249 0.751 32 H 0.107 0.893 33 H 0.095 0.905 34 H 0.126 0.874 35 H 0.122 0.878 36 H 0.207 0.793 37 H 0.207 0.793 38 H 0.106 0.894 39 H 0.113 0.887 40 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.427 5.620 3.924 7.271 hybrid contribution -2.245 0.987 0.299 2.471 sum 0.182 6.606 4.223 7.843 Atomic orbital electron populations 1.86639 1.17183 1.79949 1.49409 1.25026 0.84300 1.11351 0.97782 0.95051 0.91398 0.73938 0.81045 1.21603 0.99166 0.95935 0.98336 1.21574 0.96386 0.93639 0.96257 1.22239 0.95197 1.02142 0.93240 1.21156 0.97964 0.90731 0.96015 1.17900 0.78491 0.85617 0.82114 1.90829 1.58173 1.16138 1.75018 1.45780 1.50908 1.16116 1.22361 1.22512 0.93723 0.99523 0.82358 0.86100 1.23612 0.96438 1.02807 0.95874 1.22743 0.97996 0.99491 0.94120 0.86728 1.22186 1.02080 0.98943 0.76248 1.47506 1.29188 1.16655 1.14918 1.23715 0.99814 1.02261 0.94450 1.23682 1.03686 0.94094 0.99409 1.75170 1.08353 1.19408 1.10806 1.78305 1.20576 1.07425 1.00068 1.23363 0.98014 1.02429 0.93412 1.67512 1.20479 1.09041 1.19428 1.22623 0.94028 0.99777 0.89177 0.77423 0.85631 1.17961 1.17556 0.83401 0.82954 0.75091 0.89268 0.90475 0.87406 0.87777 0.79340 0.79333 0.89438 0.88740 0.81860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.51 12.78 -35.23 -0.45 0.06 16 2 C -0.07 0.19 2.83 36.00 0.10 0.30 16 3 Si 0.69 -2.25 29.82 -169.99 -5.07 -7.32 16 4 C -0.15 0.28 5.40 -104.36 -0.56 -0.28 16 5 C -0.05 0.06 9.76 -39.31 -0.38 -0.32 16 6 C -0.11 -0.02 9.63 -39.06 -0.38 -0.40 16 7 C 0.08 0.07 6.75 -83.01 -0.56 -0.49 16 8 C 0.57 1.09 7.81 -12.18 -0.10 1.00 16 9 O -0.53 -2.69 15.92 5.35 0.09 -2.61 16 10 N -0.70 0.67 5.35 -53.85 -0.29 0.38 16 11 C 0.12 -0.20 4.24 -67.12 -0.28 -0.48 16 12 H 0.12 0.03 7.46 -51.93 -0.39 -0.35 16 13 C -0.15 0.31 7.43 -25.92 -0.19 0.12 16 14 C -0.12 0.36 3.84 -89.80 -0.34 0.02 16 15 H 0.11 -0.11 7.92 -51.93 -0.41 -0.52 16 16 C 0.13 -0.45 6.29 -4.04 -0.03 -0.47 16 17 N -0.29 -0.08 3.44 -61.26 -0.21 -0.29 16 18 C -0.05 0.04 11.57 -17.04 -0.20 -0.16 16 19 C -0.05 -0.07 12.05 -17.73 -0.21 -0.29 16 20 N -0.27 -1.40 12.41 30.24 0.38 -1.03 16 21 N -0.08 -0.35 12.77 60.35 0.77 0.43 16 22 C -0.13 0.55 7.39 -25.92 -0.19 0.36 16 23 N -0.45 0.10 9.54 -9.80 -0.09 0.01 16 24 C 0.10 -0.18 9.84 -17.56 -0.17 -0.36 16 25 H 0.38 -1.39 8.70 45.56 0.40 -1.00 16 26 H 0.13 -0.43 7.96 -51.93 -0.41 -0.84 16 27 H -0.25 0.38 7.11 56.52 0.40 0.78 16 28 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 29 H 0.15 -0.36 8.06 -52.49 -0.42 -0.78 16 30 H 0.15 0.00 7.64 -52.49 -0.40 -0.40 16 31 H 0.41 -1.10 8.06 -40.82 -0.33 -1.43 16 32 H 0.09 -0.28 7.90 -51.93 -0.41 -0.69 16 33 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 34 H 0.11 -0.67 7.77 -51.93 -0.40 -1.07 16 35 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 36 H 0.19 -0.90 8.06 -52.49 -0.42 -1.33 16 37 H 0.19 -0.29 8.06 -52.48 -0.42 -0.71 16 38 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.09 -0.55 8.08 -51.93 -0.42 -0.97 16 40 H 0.16 -0.67 4.89 -52.48 -0.26 -0.93 16 LS Contribution 346.06 15.07 5.22 5.22 Total: 0.00 -10.68 346.06 -7.93 -18.61 By element: Atomic # 1 Polarization: -7.23 SS G_CDS: -4.77 Total: -12.00 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -3.50 Total: -1.46 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: 0.55 Total: -0.50 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -0.36 Total: -2.55 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: -5.07 Total: -7.32 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -10.68 -7.93 -18.61 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13287726.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 124.849 kcal (2) G-P(sol) polarization free energy of solvation -10.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.173 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.609 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds