Wall clock time and date at job start Tue Mar 9 2021 13:27:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86293 * 109.47081 * 2 1 4 4 C 1.50694 * 109.46934 * 239.99939 * 2 1 3 5 5 C 1.34851 * 125.89125 * 120.03156 * 4 2 1 6 6 C 1.40892 * 107.41892 * 179.97438 * 5 4 2 7 7 C 1.34847 * 107.41388 * 0.02562 * 6 5 4 8 8 C 1.50709 * 125.88721 * 179.97438 * 7 6 5 9 9 C 1.50691 * 109.47324 * 85.02302 * 8 7 6 10 10 O 1.21289 * 120.00113 * 359.97438 * 9 8 7 11 11 N 1.34773 * 120.00316 * 179.97438 * 9 8 7 12 12 C 1.46501 * 120.00122 * 179.97438 * 11 9 8 13 13 H 1.08993 * 112.90929 * 336.25213 * 12 11 9 14 14 C 1.53962 * 113.66387 * 107.55425 * 12 11 9 15 15 C 1.53782 * 87.11063 * 139.88885 * 14 12 11 16 16 H 1.08997 * 113.61225 * 89.18406 * 15 14 12 17 17 C 1.52998 * 113.68747 * 220.07804 * 15 14 12 18 18 N 1.46499 * 109.46882 * 272.53320 * 17 15 14 19 19 C 1.35320 * 125.86393 * 124.72069 * 18 17 15 20 20 C 1.35350 * 106.17498 * 179.90657 * 19 18 17 21 21 N 1.33777 * 106.49340 * 0.34469 * 20 19 18 22 22 N 1.28629 * 108.88499 * 359.78123 * 21 20 19 23 23 C 1.53781 * 87.08260 * 334.63747 * 15 14 12 24 24 N 1.36341 * 108.22344 * 0.25737 * 7 6 5 25 25 H 0.96703 * 113.99632 * 59.99849 * 1 2 3 26 26 H 1.09001 * 109.46509 * 119.99805 * 2 1 3 27 27 H 1.48510 * 110.00351 * 59.99823 * 3 2 1 28 28 H 1.48509 * 110.00147 * 181.31565 * 3 2 1 29 29 H 1.08003 * 126.29013 * 359.97438 * 5 4 2 30 30 H 1.07998 * 126.29159 * 180.02562 * 6 5 4 31 31 H 1.09002 * 109.47029 * 325.01769 * 8 7 6 32 32 H 1.09005 * 109.46740 * 205.02412 * 8 7 6 33 33 H 0.97002 * 120.00080 * 0.02562 * 11 9 8 34 34 H 1.08997 * 113.53543 * 25.33559 * 14 12 11 35 35 H 1.08998 * 113.73879 * 254.47157 * 14 12 11 36 36 H 1.08995 * 109.47742 * 32.53801 * 17 15 14 37 37 H 1.09003 * 109.47049 * 152.53819 * 17 15 14 38 38 H 1.07995 * 126.91433 * 0.02562 * 19 18 17 39 39 H 1.08001 * 126.75285 * 180.13080 * 20 19 18 40 40 H 1.09002 * 113.61445 * 139.98212 * 23 15 14 41 41 H 1.09002 * 113.61408 * 270.79943 * 23 15 14 42 42 H 0.96998 * 125.63942 * 179.73549 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7103 -0.1729 -2.1910 6 6 2.9456 -1.1750 -3.1531 7 6 2.3009 -2.2865 -2.7440 8 6 2.2749 -3.6090 -3.4662 9 6 3.4925 -4.4120 -3.0878 10 8 4.3021 -3.9553 -2.3087 11 7 3.6819 -5.6378 -3.6151 12 6 4.8660 -6.4183 -3.2476 13 1 5.6924 -5.7978 -2.9012 14 6 4.5583 -7.6090 -2.3214 15 6 5.5765 -8.4137 -3.1464 16 1 6.5976 -8.3397 -2.7722 17 6 5.1457 -9.8567 -3.4163 18 7 5.5798 -10.7113 -2.3084 19 6 4.7825 -11.5162 -1.5685 20 6 5.5897 -12.1187 -0.6645 21 7 6.8239 -11.6532 -0.8876 22 7 6.7842 -10.8214 -1.8679 23 6 5.2754 -7.4532 -4.3090 24 7 1.6715 -2.0057 -1.5676 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5615 2.4679 1.2085 28 1 3.5347 1.7703 -0.0320 29 1 3.0850 0.8397 -2.2179 30 1 3.5340 -1.0718 -4.0527 31 1 2.2740 -3.4353 -4.5423 32 1 1.3759 -4.1582 -3.1862 33 1 3.0346 -6.0030 -4.2385 34 1 3.5361 -7.9768 -2.4103 35 1 4.8625 -7.4502 -1.2868 36 1 4.0603 -9.9013 -3.5058 37 1 5.6013 -10.2045 -4.3435 38 1 3.7168 -11.6521 -1.6785 39 1 5.2949 -12.8321 0.0909 40 1 6.1592 -7.1674 -4.8793 41 1 4.4502 -7.7792 -4.9421 42 1 1.1307 -2.6258 -1.0539 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_14644196.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:14 Heat of formation + Delta-G solvation = 107.922529 kcal Electronic energy + Delta-G solvation = -25349.729298 eV Core-core repulsion = 21528.523196 eV Total energy + Delta-G solvation = -3821.206102 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -44.17370 -42.32411 -41.24095 -39.59825 -37.69337 -35.85206 -34.38522 -33.04615 -31.96365 -31.87798 -29.97420 -29.10895 -27.05277 -25.58779 -24.48427 -23.61644 -22.54962 -21.81106 -21.32575 -21.16625 -20.70027 -18.98659 -18.73995 -18.20018 -17.76126 -17.15365 -16.70756 -16.60997 -16.34126 -16.21623 -15.88454 -15.28571 -15.15030 -15.11662 -14.83050 -14.54628 -14.32217 -14.04224 -13.88608 -13.81018 -13.75893 -13.69194 -13.24138 -12.80681 -12.72057 -12.46614 -12.18361 -12.02084 -11.89549 -11.83545 -11.78412 -11.03791 -10.90261 -10.62788 -10.32983 -10.18744 -9.73597 -8.91752 -4.96898 0.64252 1.13233 1.26974 1.31051 1.53603 1.68366 1.72235 1.88072 1.99924 2.22273 2.48618 3.03850 3.12903 3.27110 3.44173 3.45874 3.53577 3.57138 3.70361 3.78701 3.81611 3.90755 3.95469 4.03609 4.11577 4.29090 4.29397 4.30746 4.43816 4.46284 4.51423 4.57246 4.64613 4.74489 4.78036 4.80117 5.00491 5.22781 5.29913 5.33416 5.35501 5.57968 6.03216 6.17693 6.32742 6.51298 6.63932 7.13076 7.58658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.720 3.280 4 C -0.009 4.009 5 C -0.188 4.188 6 C -0.172 4.172 7 C 0.034 3.966 8 C -0.072 4.072 9 C 0.511 3.489 10 O -0.520 6.520 11 N -0.724 5.724 12 C 0.127 3.873 13 H 0.119 0.881 14 C -0.149 4.149 15 C -0.124 4.124 16 H 0.114 0.886 17 C 0.127 3.873 18 N -0.289 5.289 19 C -0.052 4.052 20 C -0.051 4.051 21 N -0.271 5.271 22 N -0.083 5.083 23 C -0.134 4.134 24 N -0.535 5.535 25 H 0.381 0.619 26 H 0.110 0.890 27 H -0.256 1.256 28 H -0.255 1.255 29 H 0.142 0.858 30 H 0.136 0.864 31 H 0.118 0.882 32 H 0.099 0.901 33 H 0.402 0.598 34 H 0.087 0.913 35 H 0.074 0.926 36 H 0.107 0.893 37 H 0.104 0.896 38 H 0.190 0.810 39 H 0.190 0.810 40 H 0.086 0.914 41 H 0.092 0.908 42 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.596 -0.760 -7.066 10.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.123 4.123 5 C -0.213 4.213 6 C -0.197 4.197 7 C -0.080 4.080 8 C -0.112 4.112 9 C 0.297 3.703 10 O -0.395 6.395 11 N -0.376 5.376 12 C 0.022 3.978 13 H 0.137 0.863 14 C -0.188 4.188 15 C -0.144 4.144 16 H 0.132 0.868 17 C 0.006 3.994 18 N -0.083 5.083 19 C -0.203 4.203 20 C -0.208 4.208 21 N -0.137 5.137 22 N -0.064 5.064 23 C -0.173 4.173 24 N -0.130 5.130 25 H 0.229 0.771 26 H 0.127 0.873 27 H -0.181 1.181 28 H -0.179 1.179 29 H 0.159 0.841 30 H 0.154 0.846 31 H 0.136 0.864 32 H 0.118 0.882 33 H 0.236 0.764 34 H 0.106 0.894 35 H 0.093 0.907 36 H 0.125 0.875 37 H 0.122 0.878 38 H 0.207 0.793 39 H 0.207 0.793 40 H 0.104 0.896 41 H 0.111 0.889 42 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -5.062 0.255 -5.602 7.555 hybrid contribution -1.743 -1.710 0.115 2.444 sum -6.804 -1.455 -5.488 8.862 Atomic orbital electron populations 1.86480 1.17445 1.81775 1.49525 1.24850 0.84823 1.10757 0.95604 0.94151 0.81050 0.76273 0.86476 1.20828 1.05992 0.85596 0.99871 1.20659 1.04526 1.00075 0.95991 1.20589 1.04715 0.92574 1.01807 1.19461 1.02870 0.95744 0.89895 1.20133 0.97157 0.91808 1.02126 1.20685 0.87663 0.81229 0.80713 1.90785 1.45327 1.69616 1.33743 1.45960 1.25610 1.17505 1.48490 1.22430 0.89202 0.90576 0.95612 0.86337 1.23632 0.99132 0.96045 0.99978 1.22741 1.01841 0.91085 0.98738 0.86806 1.22176 1.01386 0.88908 0.86943 1.47504 1.06503 1.29683 1.24617 1.23712 1.00109 0.99052 0.97417 1.23691 0.89611 1.04735 1.02796 1.75170 1.21564 1.07638 1.09322 1.78302 1.01955 1.16808 1.09287 1.23357 1.02829 0.94780 0.96320 1.41778 1.40914 1.11109 1.19203 0.77143 0.87254 1.18084 1.17914 0.84088 0.84569 0.86394 0.88232 0.76393 0.89448 0.90687 0.87482 0.87791 0.79340 0.79303 0.89561 0.88906 0.75129 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.15 12.88 -35.23 -0.45 -0.60 16 2 C -0.05 -0.03 3.08 36.00 0.11 0.09 16 3 Si 0.72 -0.35 30.58 -169.99 -5.20 -5.55 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.34 9.37 -39.78 -0.37 -0.71 16 6 C -0.17 -0.34 10.77 -39.78 -0.43 -0.77 16 7 C 0.03 0.03 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.18 6.24 -29.04 -0.18 0.00 16 9 C 0.51 0.02 7.82 -10.99 -0.09 -0.07 16 10 O -0.52 -2.75 15.64 5.55 0.09 -2.66 16 11 N -0.72 2.24 5.36 -52.93 -0.28 1.96 16 12 C 0.13 -0.28 4.25 -67.02 -0.28 -0.57 16 13 H 0.12 0.06 7.47 -51.93 -0.39 -0.33 16 14 C -0.15 0.37 7.44 -25.82 -0.19 0.18 16 15 C -0.12 0.39 3.83 -89.81 -0.34 0.05 16 16 H 0.11 -0.10 7.91 -51.93 -0.41 -0.51 16 17 C 0.13 -0.49 6.29 -4.04 -0.03 -0.51 16 18 N -0.29 -0.03 3.44 -61.26 -0.21 -0.24 16 19 C -0.05 0.05 11.57 -17.04 -0.20 -0.15 16 20 C -0.05 -0.07 12.05 -17.73 -0.21 -0.28 16 21 N -0.27 -1.39 12.41 30.24 0.38 -1.01 16 22 N -0.08 -0.34 12.76 60.35 0.77 0.43 16 23 C -0.13 0.62 7.39 -25.92 -0.19 0.43 16 24 N -0.54 -0.51 6.08 -5.44 -0.03 -0.55 16 25 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 26 H 0.11 0.14 7.96 -51.93 -0.41 -0.28 16 27 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 28 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 29 H 0.14 0.01 6.22 -52.48 -0.33 -0.31 16 30 H 0.14 0.11 8.06 -52.49 -0.42 -0.32 16 31 H 0.12 -0.56 8.14 -51.93 -0.42 -0.99 16 32 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 33 H 0.40 -2.55 8.73 -40.82 -0.36 -2.90 16 34 H 0.09 -0.34 7.90 -51.93 -0.41 -0.76 16 35 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.11 -0.71 7.78 -51.93 -0.40 -1.11 16 37 H 0.10 -0.48 8.14 -51.93 -0.42 -0.91 16 38 H 0.19 -0.95 8.06 -52.49 -0.42 -1.38 16 39 H 0.19 -0.31 8.06 -52.49 -0.42 -0.73 16 40 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 41 H 0.09 -0.62 8.08 -51.93 -0.42 -1.04 16 42 H 0.41 -0.25 8.96 -40.82 -0.37 -0.62 16 LS Contribution 360.20 15.07 5.43 5.43 Total: 0.00 -13.13 360.20 -8.60 -21.73 By element: Atomic # 1 Polarization: -9.97 SS G_CDS: -5.68 Total: -15.64 kcal Atomic # 6 Polarization: 0.12 SS G_CDS: -3.40 Total: -3.29 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: 0.62 Total: 0.58 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -0.37 Total: -3.26 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.20 Total: -5.55 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -13.13 -8.60 -21.73 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_14644196.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.651 kcal (2) G-P(sol) polarization free energy of solvation -13.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.729 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds