Wall clock time and date at job start Tue Mar 9 2021 13:27:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86301 * 109.47510 * 2 1 4 4 C 1.50705 * 109.47235 * 120.00150 * 2 1 3 5 5 C 1.38709 * 120.02708 * 74.97477 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 H 1.08992 * 112.85542 * 23.80244 * 11 10 8 13 13 C 1.53781 * 113.61410 * 155.00026 * 11 10 8 14 14 C 1.53780 * 87.08425 * 139.97714 * 13 11 10 15 15 H 1.09001 * 113.61656 * 89.11293 * 14 13 11 16 16 C 1.53000 * 113.61640 * 219.93503 * 14 13 11 17 17 N 1.46497 * 109.47161 * 184.99872 * 16 14 13 18 18 C 1.35317 * 125.87006 * 124.71359 * 17 16 14 19 19 C 1.35353 * 106.17865 * 179.90439 * 18 17 16 20 20 N 1.33773 * 106.49252 * 0.35345 * 19 18 17 21 21 N 1.28638 * 108.88727 * 359.77286 * 20 19 18 22 22 C 1.53781 * 87.07976 * 334.56530 * 14 13 11 23 23 C 1.38759 * 119.88803 * 180.02562 * 5 4 2 24 24 C 1.38126 * 119.94113 * 359.97438 * 23 5 4 25 25 C 1.38290 * 120.05768 * 359.97438 * 24 23 5 26 26 C 1.38164 * 120.02603 * 255.00183 * 4 2 1 27 27 H 0.96696 * 114.00208 * 300.00257 * 1 2 3 28 28 H 1.08999 * 109.47649 * 239.99596 * 2 1 3 29 29 H 1.48495 * 109.99643 * 300.00260 * 3 2 1 30 30 H 1.48507 * 109.99665 * 61.31626 * 3 2 1 31 31 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 32 32 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 33 33 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 34 34 H 1.09002 * 113.61413 * 254.52759 * 13 11 10 35 35 H 1.09001 * 113.61670 * 25.42599 * 13 11 10 36 36 H 1.09001 * 109.46925 * 305.00125 * 16 14 13 37 37 H 1.09000 * 109.46949 * 64.99543 * 16 14 13 38 38 H 1.08004 * 126.91063 * 0.02562 * 18 17 16 39 39 H 1.07990 * 126.75037 * 180.12275 * 19 18 17 40 40 H 1.08996 * 113.61638 * 270.87884 * 22 14 13 41 41 H 1.09003 * 113.61216 * 139.97880 * 22 14 13 42 42 H 1.07998 * 120.02758 * 179.97438 * 23 5 4 43 43 H 1.07995 * 119.97120 * 179.97438 * 24 23 5 44 44 H 1.07995 * 119.94278 * 180.27458 * 25 24 23 45 45 H 1.08005 * 119.97654 * 359.95318 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8692 -2.0940 1.3071 6 8 1.3558 -2.8107 0.2729 7 6 1.3227 -4.2316 0.4214 8 6 0.7249 -4.8521 -0.8150 9 8 0.3624 -4.1469 -1.7328 10 7 0.5921 -6.1905 -0.9004 11 6 0.0114 -6.7937 -2.1026 12 1 0.1072 -6.1588 -2.9833 13 6 0.4566 -8.2466 -2.3393 14 6 -0.9910 -8.5372 -2.7693 15 1 -1.1707 -8.3792 -3.8327 16 6 -1.5198 -9.8837 -2.2711 17 7 -2.8538 -10.1208 -2.8282 18 6 -3.2333 -11.2054 -3.5427 19 6 -4.5368 -11.0150 -3.8537 20 7 -4.8842 -9.8350 -3.3279 21 7 -3.8648 -9.3307 -2.7268 22 6 -1.4080 -7.3462 -1.8904 23 6 2.3321 -2.7452 2.4416 24 6 2.8539 -2.0145 3.4913 25 6 2.9157 -0.6353 3.4119 26 6 2.4536 0.0159 2.2834 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 1.5615 2.4678 -1.2084 30 1 1.5879 2.4585 1.2243 31 1 2.3367 -4.6059 0.5623 32 1 0.7154 -4.4922 1.2883 33 1 0.8816 -6.7545 -0.1662 34 1 1.1818 -8.3551 -3.1457 35 1 0.7541 -8.7660 -1.4284 36 1 -0.8461 -10.6791 -2.5901 37 1 -1.5774 -9.8712 -1.1827 38 1 -2.6201 -12.0536 -3.8095 39 1 -5.1705 -11.6824 -4.4187 40 1 -1.6203 -7.6195 -0.8568 41 1 -2.1881 -6.7278 -2.3346 42 1 2.2844 -3.8223 2.5039 43 1 3.2139 -2.5208 4.3747 44 1 3.3281 -0.0661 4.2319 45 1 2.5026 1.0932 2.2240 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_2989392.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:28 Heat of formation + Delta-G solvation = 64.919678 kcal Electronic energy + Delta-G solvation = -28888.758292 eV Core-core repulsion = 24684.205025 eV Total energy + Delta-G solvation = -4204.553268 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -44.15329 -41.68674 -41.10323 -39.71768 -38.37783 -37.46416 -35.84949 -34.38303 -32.75396 -31.93670 -31.35662 -30.13880 -28.95793 -26.97950 -26.62056 -24.93884 -23.61896 -23.43846 -22.63060 -22.33787 -21.68313 -20.94022 -19.52241 -18.81763 -18.26289 -17.98249 -17.57732 -17.46487 -17.05278 -16.89300 -16.51033 -16.28868 -16.01455 -15.82550 -15.60975 -15.55227 -15.22656 -15.01923 -14.94550 -14.45857 -14.14936 -13.94195 -13.72674 -13.66439 -13.55614 -13.25827 -13.04645 -12.62545 -12.52687 -12.44026 -12.22955 -12.13166 -11.89960 -11.83201 -11.58160 -11.55626 -11.05405 -10.86177 -10.39342 -10.31090 -10.19752 -10.02019 -9.22802 -4.88987 0.19272 0.38905 0.65732 1.30676 1.38158 1.44360 1.46824 1.63677 1.70308 2.04913 2.52651 2.65927 3.01971 3.16311 3.30643 3.43980 3.47182 3.54288 3.58048 3.71149 3.76960 3.78542 3.84180 3.85230 3.89509 3.96783 4.01023 4.12964 4.24225 4.30994 4.32290 4.39652 4.46842 4.49129 4.51804 4.67548 4.70264 4.76901 4.96264 4.96845 4.98886 5.23608 5.24124 5.29965 5.34327 5.46273 5.60096 5.66966 6.20458 6.35561 6.60834 7.07450 7.61010 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.688 3.312 4 C -0.145 4.145 5 C 0.152 3.848 6 O -0.277 6.277 7 C 0.039 3.961 8 C 0.516 3.484 9 O -0.505 6.505 10 N -0.719 5.719 11 C 0.126 3.874 12 H 0.120 0.880 13 C -0.134 4.134 14 C -0.122 4.122 15 H 0.104 0.896 16 C 0.126 3.874 17 N -0.291 5.291 18 C -0.053 4.053 19 C -0.051 4.051 20 N -0.273 5.273 21 N -0.078 5.078 22 C -0.139 4.139 23 C -0.212 4.212 24 C -0.072 4.072 25 C -0.151 4.151 26 C -0.083 4.083 27 H 0.370 0.630 28 H 0.118 0.882 29 H -0.257 1.257 30 H -0.260 1.260 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.402 0.598 34 H 0.085 0.915 35 H 0.093 0.907 36 H 0.110 0.890 37 H 0.101 0.899 38 H 0.190 0.810 39 H 0.190 0.810 40 H 0.090 0.910 41 H 0.082 0.918 42 H 0.129 0.871 43 H 0.128 0.872 44 H 0.129 0.871 45 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.271 -6.736 4.307 11.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.175 4.175 3 Si 0.590 3.410 4 C -0.146 4.146 5 C 0.106 3.894 6 O -0.189 6.189 7 C -0.040 4.040 8 C 0.301 3.699 9 O -0.378 6.378 10 N -0.372 5.372 11 C 0.021 3.979 12 H 0.138 0.862 13 C -0.173 4.173 14 C -0.142 4.142 15 H 0.122 0.878 16 C 0.005 3.995 17 N -0.086 5.086 18 C -0.204 4.204 19 C -0.208 4.208 20 N -0.139 5.139 21 N -0.058 5.058 22 C -0.178 4.178 23 C -0.231 4.231 24 C -0.091 4.091 25 C -0.169 4.169 26 C -0.101 4.101 27 H 0.217 0.783 28 H 0.136 0.864 29 H -0.182 1.182 30 H -0.186 1.186 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.237 0.763 34 H 0.103 0.897 35 H 0.112 0.888 36 H 0.128 0.872 37 H 0.120 0.880 38 H 0.207 0.793 39 H 0.207 0.793 40 H 0.108 0.892 41 H 0.101 0.899 42 H 0.147 0.853 43 H 0.146 0.854 44 H 0.147 0.853 45 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 7.303 -4.249 3.443 9.124 hybrid contribution -0.344 -2.001 0.757 2.167 sum 6.959 -6.250 4.200 10.253 Atomic orbital electron populations 1.86708 1.17536 1.79599 1.48665 1.24903 0.84039 1.10312 0.98238 0.95154 0.91405 0.74486 0.79948 1.19644 1.05575 0.90989 0.98427 1.18795 0.93070 0.90836 0.86710 1.86241 1.77401 1.16791 1.38476 1.22478 1.02455 0.81503 0.97573 1.20070 0.78979 0.82584 0.88293 1.90811 1.47039 1.60941 1.39018 1.45766 1.64834 1.06267 1.20369 1.22505 0.93323 0.92983 0.89082 0.86243 1.23376 0.95695 0.95479 1.02751 1.22653 0.96736 0.93282 1.01545 0.87781 1.22175 0.77796 0.99504 0.99989 1.47533 1.11581 1.13881 1.35560 1.23747 0.98485 0.95525 1.02654 1.23693 0.94568 0.97138 1.05424 1.75182 1.19594 1.08729 1.10353 1.78359 0.90398 1.17590 1.19496 1.23532 0.97584 0.96311 1.00373 1.21288 1.06525 1.00404 0.94879 1.21024 0.96282 0.94100 0.97653 1.21066 1.02709 0.94573 0.98582 1.21051 0.96552 0.99952 0.92537 0.78341 0.86433 1.18187 1.18554 0.88812 0.88890 0.76324 0.89673 0.88809 0.87213 0.88036 0.79253 0.79306 0.89187 0.89928 0.85304 0.85376 0.85318 0.84760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.26 12.88 -35.23 -0.45 -2.71 16 2 C -0.07 -0.16 2.38 36.01 0.09 -0.07 16 3 Si 0.69 0.31 30.25 -169.99 -5.14 -4.83 16 4 C -0.15 -0.27 5.27 -104.47 -0.55 -0.82 16 5 C 0.15 0.31 6.66 -39.21 -0.26 0.05 16 6 O -0.28 -0.92 9.00 -39.32 -0.35 -1.28 16 7 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 8 C 0.52 0.71 7.91 -10.99 -0.09 0.62 16 9 O -0.51 -3.45 16.10 -14.35 -0.23 -3.68 16 10 N -0.72 1.72 5.35 -53.02 -0.28 1.43 16 11 C 0.13 -0.23 4.24 -67.11 -0.28 -0.52 16 12 H 0.12 0.06 7.46 -51.93 -0.39 -0.32 16 13 C -0.13 0.66 7.39 -25.92 -0.19 0.47 16 14 C -0.12 0.41 3.76 -89.81 -0.34 0.07 16 15 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 16 C 0.13 -0.50 6.29 -4.04 -0.03 -0.53 16 17 N -0.29 -0.01 3.44 -61.26 -0.21 -0.22 16 18 C -0.05 0.06 11.57 -17.04 -0.20 -0.14 16 19 C -0.05 -0.07 12.06 -17.73 -0.21 -0.28 16 20 N -0.27 -1.40 12.41 30.23 0.38 -1.02 16 21 N -0.08 -0.31 12.93 60.35 0.78 0.47 16 22 C -0.14 0.20 7.43 -25.92 -0.19 0.01 16 23 C -0.21 0.05 9.04 -39.43 -0.36 -0.30 16 24 C -0.07 0.06 10.04 -39.60 -0.40 -0.34 16 25 C -0.15 0.09 10.04 -39.56 -0.40 -0.31 16 26 C -0.08 -0.02 8.66 -39.61 -0.34 -0.36 16 27 H 0.37 0.32 8.70 45.56 0.40 0.72 16 28 H 0.12 0.39 7.83 -51.93 -0.41 -0.01 16 29 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 30 H -0.26 -0.39 6.69 56.52 0.38 -0.01 16 31 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 32 H 0.09 -0.28 7.66 -51.93 -0.40 -0.68 16 33 H 0.40 -2.38 8.73 -40.82 -0.36 -2.73 16 34 H 0.08 -0.42 8.14 -51.93 -0.42 -0.85 16 35 H 0.09 -0.64 8.08 -51.93 -0.42 -1.06 16 36 H 0.11 -0.74 8.07 -51.93 -0.42 -1.16 16 37 H 0.10 -0.49 7.85 -51.93 -0.41 -0.90 16 38 H 0.19 -0.98 8.06 -52.48 -0.42 -1.40 16 39 H 0.19 -0.32 8.06 -52.49 -0.42 -0.74 16 40 H 0.09 -0.19 7.90 -51.93 -0.41 -0.60 16 41 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 42 H 0.13 -0.37 6.30 -52.49 -0.33 -0.70 16 43 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 44 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 45 H 0.13 -0.16 4.86 -52.48 -0.26 -0.41 16 LS Contribution 381.87 15.07 5.75 5.75 Total: 0.00 -13.78 381.87 -9.30 -23.08 By element: Atomic # 1 Polarization: -8.72 SS G_CDS: -5.97 Total: -14.70 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -3.56 Total: -2.29 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: 0.66 Total: 0.66 kcal Atomic # 8 Polarization: -6.63 SS G_CDS: -1.04 Total: -7.67 kcal Atomic # 14 Polarization: 0.31 SS G_CDS: -5.14 Total: -4.83 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -13.78 -9.30 -23.08 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_2989392.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.000 kcal (2) G-P(sol) polarization free energy of solvation -13.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.219 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.080 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.920 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds