Wall clock time and date at job start Tue Mar 9 2021 13:27:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86293 * 109.47326 * 2 1 4 4 C 1.50700 * 109.47072 * 239.99857 * 2 1 3 5 5 C 1.38268 * 119.94654 * 300.00647 * 4 2 1 6 6 C 1.38141 * 120.05779 * 180.02562 * 5 4 2 7 7 C 1.38738 * 119.94312 * 359.97438 * 6 5 4 8 8 O 1.35898 * 120.05211 * 180.02562 * 7 6 5 9 9 C 1.42902 * 116.99734 * 180.02562 * 8 7 6 10 10 C 1.53002 * 109.47361 * 180.02562 * 9 8 7 11 11 C 1.50695 * 109.47004 * 180.02562 * 10 9 8 12 12 O 1.21274 * 120.00413 * 0.27039 * 11 10 9 13 13 N 1.34784 * 119.99635 * 179.97438 * 11 10 9 14 14 C 1.46499 * 119.99971 * 179.97438 * 13 11 10 15 15 H 1.09006 * 112.84822 * 23.79911 * 14 13 11 16 16 C 1.53775 * 113.61462 * 154.99913 * 14 13 11 17 17 C 1.53780 * 87.08390 * 139.98289 * 16 14 13 18 18 H 1.09003 * 113.61528 * 89.11243 * 17 16 14 19 19 C 1.52992 * 113.62018 * 220.02217 * 17 16 14 20 20 N 1.46498 * 109.47866 * 184.99949 * 19 17 16 21 21 C 1.35306 * 125.87101 * 124.71125 * 20 19 17 22 22 C 1.35352 * 106.17356 * 179.90998 * 21 20 19 23 23 N 1.33767 * 106.49727 * 0.34711 * 22 21 20 24 24 N 1.28633 * 108.88821 * 359.78140 * 23 22 21 25 25 C 1.53784 * 113.61488 * 252.49901 * 14 13 11 26 26 C 1.38731 * 119.88677 * 0.28222 * 7 6 5 27 27 C 1.38139 * 119.94589 * 359.46709 * 26 7 6 28 28 H 0.96700 * 113.99751 * 59.99747 * 1 2 3 29 29 H 1.09005 * 109.46959 * 120.00439 * 2 1 3 30 30 H 1.48506 * 110.00242 * 298.68108 * 3 2 1 31 31 H 1.48502 * 109.99955 * 59.99882 * 3 2 1 32 32 H 1.08002 * 119.97074 * 0.02562 * 5 4 2 33 33 H 1.08003 * 120.03156 * 179.97438 * 6 5 4 34 34 H 1.08997 * 109.47292 * 59.99980 * 9 8 7 35 35 H 1.09002 * 109.47330 * 300.00244 * 9 8 7 36 36 H 1.09005 * 109.47089 * 59.99854 * 10 9 8 37 37 H 1.09002 * 109.46787 * 300.00196 * 10 9 8 38 38 H 0.96999 * 120.00044 * 0.02562 * 13 11 10 39 39 H 1.09005 * 113.61447 * 254.53082 * 16 14 13 40 40 H 1.08999 * 113.61356 * 25.34833 * 16 14 13 41 41 H 1.09005 * 109.46868 * 305.00163 * 19 17 16 42 42 H 1.09004 * 109.47597 * 64.99227 * 19 17 16 43 43 H 1.07998 * 126.91792 * 0.02562 * 21 20 19 44 44 H 1.08007 * 126.75021 * 180.13164 * 22 21 20 45 45 H 1.08996 * 113.60949 * 334.56614 * 25 14 13 46 46 H 1.09001 * 113.61595 * 105.46866 * 25 14 13 47 47 H 1.08006 * 120.02485 * 179.71910 * 26 7 6 48 48 H 1.08001 * 119.97508 * 180.28039 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5965 -2.0342 -1.4482 6 6 2.0562 -2.6878 -2.5750 7 6 2.8540 -2.0147 -3.4890 8 8 3.3069 -2.6554 -4.5986 9 6 4.1240 -1.9004 -5.4955 10 6 4.5345 -2.7823 -6.6765 11 6 5.3966 -1.9862 -7.6220 12 8 5.6612 -0.8291 -7.3731 13 7 5.8787 -2.5620 -8.7413 14 6 6.7163 -1.7880 -9.6607 15 1 7.2131 -0.9478 -9.1753 16 6 7.6604 -2.6541 -10.5112 17 6 7.3347 -1.7166 -11.6859 18 1 8.0002 -0.8562 -11.7554 19 6 7.1605 -2.4440 -13.0206 20 7 6.9729 -1.4619 -14.0913 21 6 7.7156 -1.3661 -15.2183 22 6 7.1999 -0.3318 -15.9228 23 7 6.1854 0.1530 -15.1983 24 7 6.0768 -0.5383 -14.1189 25 6 6.0068 -1.4123 -10.9724 26 6 3.1929 -0.6881 -3.2655 27 6 2.7265 -0.0375 -2.1398 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5139 0.8900 30 1 1.5880 2.4586 -1.2243 31 1 1.5616 2.4678 1.2085 32 1 0.9751 -2.5576 -0.7366 33 1 1.7947 -3.7219 -2.7445 34 1 5.0156 -1.5556 -4.9719 35 1 3.5628 -1.0409 -5.8621 36 1 3.6426 -3.1267 -7.2000 37 1 5.0956 -3.6420 -6.3102 38 1 5.6703 -3.4886 -8.9383 39 1 8.7015 -2.6083 -10.1917 40 1 7.3061 -3.6749 -10.6543 41 1 8.0483 -3.0417 -13.2272 42 1 6.2882 -3.0955 -12.9682 43 1 8.5505 -1.9905 -15.5000 44 1 7.5427 0.0328 -16.8800 45 1 5.1998 -2.0932 -11.2427 46 1 5.7130 -0.3640 -11.0251 47 1 3.8176 -0.1633 -3.9732 48 1 2.9863 0.9966 -1.9676 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:36 Heat of formation + Delta-G solvation = 51.472498 kcal Electronic energy + Delta-G solvation = -29825.187888 eV Core-core repulsion = 25464.513888 eV Total energy + Delta-G solvation = -4360.674000 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -44.17371 -41.54051 -41.14896 -39.85170 -39.08694 -37.23613 -35.88938 -34.42949 -33.30915 -32.00795 -31.95216 -31.40764 -29.67932 -27.00742 -26.74826 -25.84140 -24.54700 -23.59301 -23.37668 -22.38541 -22.09381 -21.65595 -20.89382 -19.49631 -18.80113 -18.41310 -17.80777 -17.65441 -17.51207 -17.07965 -16.87815 -16.48211 -16.29005 -16.14606 -16.03371 -15.85321 -15.60713 -15.44723 -14.91450 -14.68133 -14.61375 -14.42678 -14.22642 -14.06812 -13.92628 -13.73834 -13.40802 -13.33537 -12.91948 -12.89294 -12.63635 -12.47871 -12.19127 -12.16267 -12.03669 -11.92161 -11.80622 -11.60606 -11.54319 -11.09926 -10.98929 -10.55121 -10.32976 -10.21884 -9.98853 -9.16167 -4.92619 0.33628 0.36037 0.63868 1.29774 1.33304 1.44287 1.63283 1.64422 1.68421 1.99929 2.40781 2.70707 2.99971 3.14549 3.31790 3.41511 3.42009 3.45917 3.55692 3.70883 3.75489 3.79417 3.80802 3.84791 3.85105 3.95282 3.98829 4.11243 4.24178 4.29190 4.30710 4.37895 4.39330 4.44848 4.48970 4.54783 4.57983 4.61423 4.65740 4.74956 4.76437 4.91979 4.97612 5.00029 5.22253 5.22330 5.32895 5.33326 5.53632 5.58194 5.75169 6.25701 6.37375 6.44726 7.01980 7.58944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.680 3.320 4 C -0.157 4.157 5 C -0.053 4.053 6 C -0.151 4.151 7 C 0.137 3.863 8 O -0.316 6.316 9 C 0.073 3.927 10 C -0.142 4.142 11 C 0.522 3.478 12 O -0.536 6.536 13 N -0.719 5.719 14 C 0.123 3.877 15 H 0.119 0.881 16 C -0.135 4.135 17 C -0.122 4.122 18 H 0.104 0.896 19 C 0.126 3.874 20 N -0.291 5.291 21 C -0.053 4.053 22 C -0.051 4.051 23 N -0.273 5.273 24 N -0.079 5.079 25 C -0.139 4.139 26 C -0.203 4.203 27 C -0.075 4.075 28 H 0.376 0.624 29 H 0.118 0.882 30 H -0.261 1.261 31 H -0.257 1.257 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.107 0.893 37 H 0.108 0.892 38 H 0.404 0.596 39 H 0.084 0.916 40 H 0.093 0.907 41 H 0.110 0.890 42 H 0.102 0.898 43 H 0.191 0.809 44 H 0.190 0.810 45 H 0.089 0.911 46 H 0.081 0.919 47 H 0.134 0.866 48 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.148 -6.945 -2.305 9.558 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.582 3.418 4 C -0.157 4.157 5 C -0.071 4.071 6 C -0.169 4.169 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.308 3.692 12 O -0.412 6.412 13 N -0.370 5.370 14 C 0.018 3.982 15 H 0.137 0.863 16 C -0.174 4.174 17 C -0.142 4.142 18 H 0.122 0.878 19 C 0.005 3.995 20 N -0.085 5.085 21 C -0.204 4.204 22 C -0.208 4.208 23 N -0.139 5.139 24 N -0.059 5.059 25 C -0.178 4.178 26 C -0.221 4.221 27 C -0.093 4.093 28 H 0.223 0.777 29 H 0.135 0.865 30 H -0.186 1.186 31 H -0.182 1.182 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.126 0.874 37 H 0.126 0.874 38 H 0.238 0.762 39 H 0.103 0.897 40 H 0.112 0.888 41 H 0.128 0.872 42 H 0.120 0.880 43 H 0.208 0.792 44 H 0.207 0.793 45 H 0.108 0.892 46 H 0.100 0.900 47 H 0.152 0.848 48 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.997 -5.142 -0.873 7.224 hybrid contribution 0.013 -1.122 -1.442 1.827 sum 5.010 -6.264 -2.315 8.349 Atomic orbital electron populations 1.86590 1.17864 1.79934 1.49355 1.24933 0.83826 1.10701 0.98411 0.95072 0.91806 0.74737 0.80226 1.20185 1.02002 0.95524 0.98020 1.20829 0.96938 0.93438 0.95938 1.20502 1.00930 1.01055 0.94444 1.18993 0.94061 0.91022 0.86714 1.85973 1.65050 1.40454 1.31528 1.22429 0.94757 0.93852 0.89186 1.21478 1.01359 0.99913 0.95442 1.20338 0.79913 0.87440 0.81492 1.90760 1.58555 1.17324 1.74550 1.45912 1.52364 1.15779 1.22963 1.22506 0.91859 0.95622 0.88244 0.86316 1.23370 1.00990 0.98746 0.94263 1.22654 1.00151 0.99798 0.91599 0.87815 1.22180 1.04651 0.88613 0.84056 1.47529 1.21536 1.23455 1.16010 1.23747 1.02610 1.04398 0.89634 1.23693 0.96895 0.97343 1.02882 1.75175 1.17342 1.21409 0.99946 1.78353 1.11505 0.98989 1.17052 1.23525 0.96148 1.03801 0.94294 1.21267 1.05754 0.94398 1.00697 1.20807 0.96039 0.99226 0.93192 0.77671 0.86470 1.18574 1.18223 0.84893 0.84878 0.90778 0.90896 0.87440 0.87396 0.76152 0.89744 0.88814 0.87217 0.88018 0.79246 0.79303 0.89202 0.90010 0.84790 0.85340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.93 12.77 -35.23 -0.45 -1.38 16 2 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.68 -0.15 29.78 -169.99 -5.06 -5.22 16 4 C -0.16 -0.13 5.39 -104.60 -0.56 -0.70 16 5 C -0.05 -0.06 9.60 -39.61 -0.38 -0.44 16 6 C -0.15 -0.20 9.99 -39.43 -0.39 -0.59 16 7 C 0.14 0.25 6.69 -39.21 -0.26 -0.02 16 8 O -0.32 -0.42 10.14 -19.42 -0.20 -0.61 16 9 C 0.07 -0.01 4.03 37.16 0.15 0.14 16 10 C -0.14 0.35 6.07 -27.88 -0.17 0.18 16 11 C 0.52 -0.27 7.83 -10.98 -0.09 -0.36 16 12 O -0.54 -1.98 15.58 5.56 0.09 -1.90 16 13 N -0.72 2.26 5.35 -53.02 -0.28 1.98 16 14 C 0.12 -0.32 4.24 -67.12 -0.28 -0.60 16 15 H 0.12 -0.05 7.46 -51.93 -0.39 -0.44 16 16 C -0.13 0.71 7.39 -25.92 -0.19 0.52 16 17 C -0.12 0.46 3.76 -89.81 -0.34 0.12 16 18 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 19 C 0.13 -0.54 6.29 -4.05 -0.03 -0.56 16 20 N -0.29 0.09 3.44 -61.27 -0.21 -0.12 16 21 C -0.05 0.07 11.57 -17.05 -0.20 -0.13 16 22 C -0.05 -0.05 12.05 -17.74 -0.21 -0.26 16 23 N -0.27 -1.30 12.41 30.24 0.38 -0.92 16 24 N -0.08 -0.28 12.93 60.35 0.78 0.50 16 25 C -0.14 0.29 7.43 -25.91 -0.19 0.10 16 26 C -0.20 -0.24 9.04 -39.44 -0.36 -0.59 16 27 C -0.08 -0.05 8.66 -39.61 -0.34 -0.39 16 28 H 0.38 -0.34 8.70 45.56 0.40 0.06 16 29 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 30 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 31 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 32 H 0.13 0.02 8.06 -52.49 -0.42 -0.41 16 33 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 34 H 0.07 0.00 7.61 -51.93 -0.39 -0.39 16 35 H 0.07 0.03 7.63 -51.93 -0.40 -0.37 16 36 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 37 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 38 H 0.40 -2.44 8.73 -40.82 -0.36 -2.80 16 39 H 0.08 -0.44 8.14 -51.93 -0.42 -0.87 16 40 H 0.09 -0.65 8.08 -51.93 -0.42 -1.07 16 41 H 0.11 -0.77 8.07 -51.93 -0.42 -1.18 16 42 H 0.10 -0.52 7.84 -51.93 -0.41 -0.92 16 43 H 0.19 -1.02 8.06 -52.49 -0.42 -1.45 16 44 H 0.19 -0.37 8.06 -52.48 -0.42 -0.79 16 45 H 0.09 -0.23 7.90 -51.93 -0.41 -0.64 16 46 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 47 H 0.13 0.02 6.30 -52.48 -0.33 -0.31 16 48 H 0.13 -0.13 4.87 -52.49 -0.26 -0.39 16 LS Contribution 403.57 15.07 6.08 6.08 Total: 0.00 -11.74 403.57 -9.42 -21.16 By element: Atomic # 1 Polarization: -9.26 SS G_CDS: -6.80 Total: -16.05 kcal Atomic # 6 Polarization: 0.24 SS G_CDS: -3.75 Total: -3.51 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: 0.66 Total: 1.43 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.56 Total: -3.89 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.06 Total: -5.22 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.74 -9.42 -21.16 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.633 kcal (2) G-P(sol) polarization free energy of solvation -11.737 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.161 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds