Wall clock time and date at job start Tue Mar 9 2021 13:27:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.46922 * 2 1 4 4 C 1.50701 * 109.46980 * 239.99999 * 2 1 3 5 5 C 1.38243 * 119.96851 * 120.25500 * 4 2 1 6 6 C 1.38288 * 120.10724 * 180.25848 * 5 4 2 7 7 C 1.38126 * 120.05386 * 359.48327 * 6 5 4 8 8 C 1.38746 * 119.94576 * 0.26200 * 7 6 5 9 9 O 1.35908 * 120.05602 * 179.97438 * 8 7 6 10 10 C 1.42892 * 116.99907 * 359.97438 * 9 8 7 11 11 C 1.52997 * 109.47378 * 180.02562 * 10 9 8 12 12 C 1.50698 * 109.47463 * 180.02562 * 11 10 9 13 13 O 1.21276 * 120.00270 * 0.02562 * 12 11 10 14 14 N 1.34778 * 120.00027 * 180.02562 * 12 11 10 15 15 C 1.46505 * 120.00022 * 180.02562 * 14 12 11 16 16 H 1.08998 * 112.84680 * 23.79678 * 15 14 12 17 17 C 1.53776 * 113.61313 * 154.99973 * 15 14 12 18 18 C 1.53780 * 87.07909 * 139.98082 * 17 15 14 19 19 H 1.08996 * 113.62004 * 89.11993 * 18 17 15 20 20 C 1.53010 * 113.61324 * 219.93516 * 18 17 15 21 21 N 1.46499 * 109.47159 * 185.00105 * 20 18 17 22 22 C 1.35311 * 125.87134 * 124.99865 * 21 20 18 23 23 C 1.35353 * 106.17725 * 179.97438 * 22 21 20 24 24 N 1.33769 * 106.49493 * 0.02562 * 23 22 21 25 25 N 1.28636 * 108.88606 * 359.72801 * 24 23 22 26 26 C 1.53778 * 113.61036 * 252.49722 * 15 14 12 27 27 C 1.38166 * 119.97212 * 299.99951 * 4 2 1 28 28 H 0.96705 * 114.00185 * 299.99973 * 1 2 3 29 29 H 1.08997 * 109.47022 * 119.99963 * 2 1 3 30 30 H 1.48503 * 109.99885 * 178.68112 * 3 2 1 31 31 H 1.48496 * 110.00198 * 300.00080 * 3 2 1 32 32 H 1.07993 * 119.94940 * 359.97438 * 5 4 2 33 33 H 1.08002 * 119.97454 * 179.76977 * 6 5 4 34 34 H 1.07999 * 120.02656 * 180.27809 * 7 6 5 35 35 H 1.08998 * 109.47662 * 300.00790 * 10 9 8 36 36 H 1.09009 * 109.47105 * 60.00844 * 10 9 8 37 37 H 1.09006 * 109.47089 * 300.00606 * 11 10 9 38 38 H 1.09000 * 109.47040 * 60.00307 * 11 10 9 39 39 H 0.96999 * 119.99985 * 0.02562 * 14 12 11 40 40 H 1.09000 * 113.61335 * 254.52496 * 17 15 14 41 41 H 1.08996 * 113.61814 * 25.34765 * 17 15 14 42 42 H 1.08999 * 109.46711 * 304.99815 * 20 18 17 43 43 H 1.08992 * 109.47134 * 64.99638 * 20 18 17 44 44 H 1.08004 * 126.91002 * 0.02562 * 22 21 20 45 45 H 1.08000 * 126.75191 * 180.02562 * 23 22 21 46 46 H 1.09001 * 113.61726 * 334.56664 * 26 15 14 47 47 H 1.08998 * 113.61851 * 105.46780 * 26 15 14 48 48 H 1.08006 * 120.02853 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7304 -0.0395 -2.1374 6 6 3.1885 -0.6870 -3.2702 7 6 2.8573 -2.0094 -3.4927 8 6 2.0598 -2.6865 -2.5813 9 8 1.7321 -3.9875 -2.7983 10 6 2.2431 -4.5957 -3.9860 11 6 1.7719 -6.0495 -4.0579 12 6 2.3113 -6.6912 -5.3102 13 8 3.0048 -6.0492 -6.0702 14 7 2.0230 -7.9787 -5.5856 15 6 2.5479 -8.6027 -6.8028 16 1 3.4473 -8.1126 -7.1756 17 6 2.6748 -10.1321 -6.7054 18 6 2.1661 -10.1879 -8.1555 19 1 2.9607 -10.1316 -8.8995 20 6 1.1869 -11.3340 -8.4178 21 7 0.8545 -11.3755 -9.8440 22 6 0.9882 -12.4479 -10.6584 23 6 0.5682 -12.0475 -11.8812 24 7 0.2034 -10.7665 -11.7568 25 7 0.3801 -10.3998 -10.5366 26 6 1.4798 -8.8389 -7.8836 27 6 1.5972 -2.0332 -1.4485 28 1 -0.3934 0.4417 0.7651 29 1 1.7923 -0.5138 0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5614 2.4679 -1.2084 32 1 2.9935 0.9933 -1.9633 33 1 3.8096 -0.1597 -3.9791 34 1 3.2190 -2.5160 -4.3752 35 1 1.8790 -4.0526 -4.8581 36 1 3.3327 -4.5671 -3.9690 37 1 2.1357 -6.5930 -3.1858 38 1 0.6824 -6.0779 -4.0751 39 1 1.4680 -8.4921 -4.9780 40 1 3.7018 -10.4784 -6.5893 41 1 1.9924 -10.5819 -5.9842 42 1 1.6455 -12.2781 -8.1240 43 1 0.2781 -11.1753 -7.8374 44 1 1.3554 -13.4266 -10.3870 45 1 0.5342 -12.6447 -12.7804 46 1 0.4696 -8.9352 -7.4856 47 1 1.5419 -8.1412 -8.7188 48 1 0.9759 -2.5580 -0.7378 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:40 Heat of formation + Delta-G solvation = 53.783647 kcal Electronic energy + Delta-G solvation = -29851.265719 eV Core-core repulsion = 25490.691938 eV Total energy + Delta-G solvation = -4360.573781 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -44.16542 -41.52564 -41.12854 -39.82840 -38.94745 -37.29287 -35.88012 -34.41926 -33.23546 -32.54440 -31.94656 -30.86707 -29.64193 -27.04428 -26.99305 -25.89760 -24.27389 -23.63853 -23.54115 -22.43350 -21.85504 -21.58894 -20.87739 -19.12187 -18.78705 -18.40283 -17.97837 -17.65465 -17.48511 -17.28640 -17.05410 -16.87330 -16.36290 -16.11323 -15.86376 -15.77715 -15.44385 -15.37525 -14.92178 -14.59942 -14.50086 -14.39768 -14.12953 -14.00200 -13.91790 -13.72890 -13.39589 -13.32465 -12.95040 -12.80700 -12.62789 -12.47075 -12.28565 -12.17950 -12.04066 -11.91331 -11.81708 -11.70122 -11.59836 -11.08970 -10.97871 -10.39488 -10.32210 -10.20792 -9.82594 -9.21002 -4.95791 0.25092 0.43738 0.64713 1.27490 1.30583 1.45618 1.65675 1.66587 1.69239 1.99979 2.42080 2.68368 3.00910 3.15301 3.32475 3.38623 3.42898 3.47631 3.56679 3.73618 3.77918 3.81307 3.84009 3.87039 3.90125 3.97049 4.03662 4.11939 4.24794 4.24992 4.29218 4.29909 4.39017 4.45581 4.46589 4.50046 4.56792 4.59750 4.66481 4.71214 4.75921 4.93119 4.98673 5.01135 5.23007 5.28312 5.34024 5.40199 5.48107 5.58961 5.69746 6.27030 6.39853 6.62214 7.03331 7.59769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.073 4.073 3 Si 0.687 3.313 4 C -0.038 4.038 5 C -0.163 4.163 6 C -0.071 4.071 7 C -0.203 4.203 8 C 0.134 3.866 9 O -0.315 6.315 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.522 3.478 13 O -0.536 6.536 14 N -0.719 5.719 15 C 0.122 3.878 16 H 0.119 0.881 17 C -0.135 4.135 18 C -0.122 4.122 19 H 0.103 0.897 20 C 0.126 3.874 21 N -0.291 5.291 22 C -0.053 4.053 23 C -0.051 4.051 24 N -0.273 5.273 25 N -0.079 5.079 26 C -0.139 4.139 27 C -0.121 4.121 28 H 0.383 0.617 29 H 0.077 0.923 30 H -0.255 1.255 31 H -0.250 1.250 32 H 0.119 0.881 33 H 0.130 0.870 34 H 0.134 0.866 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.108 0.892 38 H 0.108 0.892 39 H 0.404 0.596 40 H 0.084 0.916 41 H 0.094 0.906 42 H 0.110 0.890 43 H 0.102 0.898 44 H 0.190 0.810 45 H 0.190 0.810 46 H 0.090 0.910 47 H 0.081 0.919 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.612 -5.698 6.843 8.926 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.183 4.183 3 Si 0.588 3.412 4 C -0.038 4.038 5 C -0.180 4.180 6 C -0.089 4.089 7 C -0.221 4.221 8 C 0.089 3.911 9 O -0.229 6.229 10 C -0.002 4.002 11 C -0.182 4.182 12 C 0.308 3.692 13 O -0.412 6.412 14 N -0.370 5.370 15 C 0.018 3.982 16 H 0.137 0.863 17 C -0.174 4.174 18 C -0.142 4.142 19 H 0.122 0.878 20 C 0.005 3.995 21 N -0.085 5.085 22 C -0.204 4.204 23 C -0.208 4.208 24 N -0.139 5.139 25 N -0.059 5.059 26 C -0.178 4.178 27 C -0.140 4.140 28 H 0.231 0.769 29 H 0.095 0.905 30 H -0.180 1.180 31 H -0.175 1.175 32 H 0.137 0.863 33 H 0.148 0.852 34 H 0.152 0.848 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.239 0.761 40 H 0.102 0.898 41 H 0.112 0.888 42 H 0.128 0.872 43 H 0.120 0.880 44 H 0.208 0.792 45 H 0.207 0.793 46 H 0.108 0.892 47 H 0.100 0.900 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.128 -3.604 5.465 6.643 hybrid contribution 0.320 -2.183 -0.092 2.208 sum 1.448 -5.787 5.373 8.028 Atomic orbital electron populations 1.86501 1.17046 1.81836 1.49689 1.24717 0.85854 1.10477 0.97277 0.95413 0.80589 0.77806 0.87380 1.19116 0.96541 0.93207 0.94922 1.20779 1.01998 0.99358 0.95892 1.20874 0.97857 0.93850 0.96342 1.21374 1.03226 0.96341 1.01181 1.18923 0.94518 0.83216 0.94424 1.85969 1.71201 1.22668 1.43059 1.22423 0.99335 0.92123 0.86327 1.21475 1.03987 0.95412 0.97289 1.20338 0.80001 0.81961 0.86866 1.90759 1.37916 1.62459 1.50094 1.45909 1.53661 1.12212 1.25223 1.22505 0.98475 0.92307 0.84956 0.86349 1.23369 1.02938 0.95661 0.95396 1.22653 0.98533 0.94821 0.98187 0.87833 1.22179 1.00606 1.01617 0.75091 1.47529 1.41403 1.08490 1.11105 1.23749 1.09288 0.95631 0.91737 1.23691 1.04670 0.93622 0.98823 1.75178 1.17873 1.12109 1.08716 1.78353 1.15114 1.13577 0.98842 1.23521 0.98812 0.96156 0.99264 1.20206 1.02716 0.93885 0.97206 0.76947 0.90527 1.17976 1.17496 0.86326 0.85163 0.84794 0.90875 0.90910 0.87405 0.87362 0.76140 0.89758 0.88800 0.87210 0.88019 0.79248 0.79302 0.89177 0.90012 0.84619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.43 12.74 -35.23 -0.45 -0.88 16 2 C -0.07 -0.05 2.81 36.01 0.10 0.05 16 3 Si 0.69 -0.37 29.79 -169.99 -5.06 -5.43 16 4 C -0.04 -0.13 5.42 -104.65 -0.57 -0.69 16 5 C -0.16 -0.55 8.67 -39.56 -0.34 -0.90 16 6 C -0.07 -0.20 10.04 -39.60 -0.40 -0.59 16 7 C -0.20 -0.60 9.04 -39.43 -0.36 -0.96 16 8 C 0.13 0.49 6.69 -39.22 -0.26 0.23 16 9 O -0.32 -0.85 10.14 -19.45 -0.20 -1.05 16 10 C 0.07 0.07 4.03 37.16 0.15 0.22 16 11 C -0.14 0.24 6.07 -27.89 -0.17 0.07 16 12 C 0.52 0.09 7.83 -10.99 -0.09 0.00 16 13 O -0.54 -2.38 15.58 5.56 0.09 -2.30 16 14 N -0.72 1.87 5.35 -53.02 -0.28 1.59 16 15 C 0.12 -0.26 4.24 -67.12 -0.28 -0.55 16 16 H 0.12 0.01 7.46 -51.93 -0.39 -0.38 16 17 C -0.13 0.66 7.39 -25.92 -0.19 0.47 16 18 C -0.12 0.41 3.76 -89.80 -0.34 0.07 16 19 H 0.10 -0.21 8.14 -51.93 -0.42 -0.64 16 20 C 0.13 -0.50 6.30 -4.04 -0.03 -0.53 16 21 N -0.29 0.01 3.44 -61.26 -0.21 -0.20 16 22 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 23 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 24 N -0.27 -1.36 12.41 30.23 0.38 -0.99 16 25 N -0.08 -0.30 12.94 60.35 0.78 0.48 16 26 C -0.14 0.23 7.43 -25.92 -0.19 0.04 16 27 C -0.12 -0.45 9.55 -39.43 -0.38 -0.82 16 28 H 0.38 -1.71 8.74 45.56 0.40 -1.31 16 29 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 30 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 31 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 32 H 0.12 0.31 4.87 -52.49 -0.26 0.06 16 33 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 34 H 0.13 0.22 6.30 -52.49 -0.33 -0.11 16 35 H 0.07 0.11 7.62 -51.93 -0.40 -0.28 16 36 H 0.07 0.08 7.62 -51.92 -0.40 -0.31 16 37 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 38 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.40 -2.24 8.73 -40.82 -0.36 -2.59 16 40 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 41 H 0.09 -0.62 8.08 -51.93 -0.42 -1.04 16 42 H 0.11 -0.74 8.07 -51.93 -0.42 -1.16 16 43 H 0.10 -0.49 7.85 -51.93 -0.41 -0.89 16 44 H 0.19 -0.98 8.06 -52.48 -0.42 -1.41 16 45 H 0.19 -0.33 8.06 -52.49 -0.42 -0.75 16 46 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 47 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 48 H 0.14 0.39 8.06 -52.48 -0.42 -0.03 16 LS Contribution 403.64 15.07 6.08 6.08 Total: 0.00 -12.96 403.64 -9.42 -22.38 By element: Atomic # 1 Polarization: -8.58 SS G_CDS: -6.80 Total: -15.37 kcal Atomic # 6 Polarization: -0.55 SS G_CDS: -3.75 Total: -4.30 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: 0.66 Total: 0.87 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.56 Total: -4.23 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.06 Total: -5.43 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -12.96 -9.42 -22.38 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.164 kcal (2) G-P(sol) polarization free energy of solvation -12.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.380 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.784 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds