Wall clock time and date at job start Tue Mar 9 2021 12:51:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35983 * 116.99905 * 2 1 4 4 C 1.38675 * 120.00525 * 179.97438 * 3 2 1 5 5 C 1.38153 * 120.00439 * 180.02562 * 4 3 2 6 6 C 1.50700 * 120.00154 * 180.02562 * 5 4 3 7 7 O 1.42903 * 109.46863 * 254.97816 * 6 5 4 8 8 Si 1.86300 * 109.46981 * 14.97902 * 6 5 4 9 9 C 1.38674 * 119.99822 * 0.02562 * 5 4 3 10 10 O 1.35986 * 119.99838 * 180.02562 * 9 5 4 11 11 C 1.42900 * 116.99998 * 180.02562 * 10 9 5 12 12 C 1.50699 * 109.47251 * 179.97438 * 11 10 9 13 13 O 1.21278 * 119.99881 * 0.02562 * 12 11 10 14 14 N 1.34773 * 119.99956 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99998 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.84818 * 23.79737 * 15 14 12 17 17 C 1.53784 * 113.61873 * 155.00181 * 15 14 12 18 18 C 1.53775 * 87.08264 * 139.97496 * 17 15 14 19 19 H 1.09009 * 113.61441 * 89.19974 * 18 17 15 20 20 C 1.52998 * 113.61828 * 220.01603 * 18 17 15 21 21 N 1.46492 * 109.47661 * 185.00296 * 20 18 17 22 22 C 1.35317 * 125.86956 * 125.01469 * 21 20 18 23 23 C 1.35349 * 106.17446 * 179.97438 * 22 21 20 24 24 N 1.33777 * 106.49799 * 0.02562 * 23 22 21 25 25 N 1.28634 * 108.88349 * 359.97438 * 24 23 22 26 26 C 1.53782 * 87.08553 * 334.57075 * 18 17 15 27 27 C 1.38722 * 120.00279 * 0.27256 * 9 5 4 28 28 C 1.38116 * 119.99475 * 359.44745 * 27 9 5 29 29 H 1.08998 * 109.47167 * 299.99917 * 1 2 3 30 30 H 1.08994 * 109.47492 * 60.00085 * 1 2 3 31 31 H 1.09000 * 109.47114 * 180.02562 * 1 2 3 32 32 H 1.07998 * 119.99852 * 0.04984 * 4 3 2 33 33 H 1.08999 * 109.46990 * 134.97962 * 6 5 4 34 34 H 0.96692 * 113.99858 * 300.00064 * 7 6 5 35 35 H 1.48509 * 109.99961 * 298.68073 * 8 6 5 36 36 H 1.48492 * 110.00183 * 60.00013 * 8 6 5 37 37 H 1.09005 * 109.47493 * 59.99077 * 11 10 9 38 38 H 1.09003 * 109.46898 * 299.99507 * 11 10 9 39 39 H 0.97007 * 120.00261 * 0.02562 * 14 12 11 40 40 H 1.09001 * 113.61059 * 25.42716 * 17 15 14 41 41 H 1.08997 * 113.68954 * 254.53817 * 17 15 14 42 42 H 1.09000 * 109.46764 * 64.99644 * 20 18 17 43 43 H 1.09002 * 109.47236 * 305.00587 * 20 18 17 44 44 H 1.07995 * 126.91332 * 0.02562 * 22 21 20 45 45 H 1.07997 * 126.75241 * 179.97438 * 23 22 21 46 46 H 1.08995 * 113.61616 * 139.98387 * 26 18 17 47 47 H 1.09007 * 113.60659 * 270.88658 * 26 18 17 48 48 H 1.07991 * 120.00365 * 179.70407 * 27 9 5 49 49 H 1.07995 * 119.99597 * 180.24729 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4311 1.2844 0.0005 5 6 4.0583 2.5153 0.0011 6 6 5.5632 2.5943 0.0011 7 8 6.0206 2.9674 1.3025 8 14 6.2722 0.9326 -0.4537 9 6 3.3029 3.6783 0.0016 10 8 3.9203 4.8900 0.0016 11 6 3.0803 6.0460 0.0027 12 6 3.9344 7.2876 0.0032 13 8 5.1434 7.1919 0.0021 14 7 3.3547 8.5043 0.0038 15 6 4.1850 9.7113 0.0036 16 1 5.1819 9.5391 -0.4022 17 6 3.4818 10.9428 -0.5912 18 6 4.1368 11.7621 0.5332 19 1 5.1205 12.1529 0.2727 20 6 3.2151 12.8257 1.1334 21 7 3.9622 13.6270 2.1059 22 6 4.0862 14.9744 2.0948 23 6 4.8522 15.2914 3.1647 24 7 5.1558 14.1376 3.7698 25 7 4.6133 13.1703 3.1180 26 6 4.1857 10.4586 1.3477 27 6 1.9176 3.6057 0.0073 28 6 1.2907 2.3750 0.0009 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 4.0194 0.3787 0.0001 33 1 5.8880 3.3391 -0.7255 34 1 5.6899 3.8242 1.6049 35 1 5.8628 -0.0854 0.5471 36 1 5.8040 0.5332 -1.8051 37 1 2.4516 6.0375 0.8932 38 1 2.4504 6.0383 -0.8868 39 1 2.3877 8.5809 0.0042 40 1 2.3948 10.8998 -0.5238 41 1 3.8339 11.2094 -1.5877 42 1 2.3757 12.3400 1.6310 43 1 2.8418 13.4728 0.3397 44 1 3.6592 15.6592 1.3771 45 1 5.1588 16.2811 3.4695 46 1 5.1069 10.3334 1.9165 47 1 3.2909 10.2833 1.9451 48 1 1.3294 4.5113 0.0126 49 1 0.2122 2.3185 0.0014 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:48 Heat of formation + Delta-G solvation = 21.441993 kcal Electronic energy + Delta-G solvation = -33102.612628 eV Core-core repulsion = 28421.954216 eV Total energy + Delta-G solvation = -4680.658412 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -44.14859 -41.94430 -41.25452 -40.26121 -39.44183 -38.14290 -37.01499 -35.80677 -34.38601 -32.93735 -31.92592 -31.22542 -30.05139 -28.92647 -28.06435 -26.74458 -26.65628 -24.90631 -23.77264 -23.47707 -22.51669 -22.33770 -21.68886 -20.76901 -19.64506 -18.92757 -18.72865 -18.40527 -18.09099 -17.59609 -17.52833 -17.39718 -16.85677 -16.75701 -16.24730 -16.12967 -15.86969 -15.78735 -15.60495 -15.53162 -15.36585 -15.18060 -14.73675 -14.35057 -14.16941 -13.98899 -13.75324 -13.65248 -13.51945 -13.45656 -13.17023 -13.11471 -12.62197 -12.59724 -12.37953 -12.29516 -12.23536 -11.99985 -11.92144 -11.55578 -11.42593 -11.30431 -11.14515 -11.03831 -10.93881 -10.30867 -10.25836 -10.14091 -8.95334 -4.88434 -0.08801 0.19553 0.70679 1.30012 1.40672 1.41536 1.55265 1.57369 1.64435 1.87941 2.21242 2.40765 2.54042 3.29878 3.39476 3.42660 3.46125 3.57259 3.63421 3.66780 3.74866 3.81242 3.90456 3.96900 4.01938 4.02382 4.07063 4.10858 4.16255 4.25229 4.26829 4.32313 4.32706 4.35095 4.36710 4.55156 4.66764 4.67189 4.69712 4.78891 4.84966 4.85684 4.95847 4.98974 5.05155 5.05803 5.13691 5.27709 5.28967 5.49994 5.74553 6.04886 6.29326 6.44804 6.50977 7.12568 7.56470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.342 6.342 3 C 0.088 3.912 4 C -0.143 4.143 5 C -0.119 4.119 6 C -0.086 4.086 7 O -0.545 6.545 8 Si 0.811 3.189 9 C 0.097 3.903 10 O -0.311 6.311 11 C 0.035 3.965 12 C 0.512 3.488 13 O -0.571 6.571 14 N -0.697 5.697 15 C 0.116 3.884 16 H 0.088 0.912 17 C -0.107 4.107 18 C -0.117 4.117 19 H 0.084 0.916 20 C 0.118 3.882 21 N -0.286 5.286 22 C -0.035 4.035 23 C -0.074 4.074 24 N -0.326 5.326 25 N -0.121 5.121 26 C -0.142 4.142 27 C -0.154 4.154 28 C -0.158 4.158 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.114 0.886 32 H 0.123 0.877 33 H 0.078 0.922 34 H 0.371 0.629 35 H -0.287 1.287 36 H -0.265 1.265 37 H 0.125 0.875 38 H 0.127 0.873 39 H 0.423 0.577 40 H 0.128 0.872 41 H 0.092 0.908 42 H 0.116 0.884 43 H 0.150 0.850 44 H 0.237 0.763 45 H 0.208 0.792 46 H 0.042 0.958 47 H 0.101 0.899 48 H 0.176 0.824 49 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.366 6.805 -6.973 15.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.043 3.957 4 C -0.161 4.161 5 C -0.120 4.120 6 C -0.193 4.193 7 O -0.351 6.351 8 Si 0.712 3.288 9 C 0.052 3.948 10 O -0.225 6.225 11 C -0.042 4.042 12 C 0.298 3.702 13 O -0.449 6.449 14 N -0.351 5.351 15 C 0.011 3.989 16 H 0.106 0.894 17 C -0.146 4.146 18 C -0.137 4.137 19 H 0.103 0.897 20 C -0.001 4.001 21 N -0.081 5.081 22 C -0.186 4.186 23 C -0.232 4.232 24 N -0.191 5.191 25 N -0.100 5.100 26 C -0.181 4.181 27 C -0.172 4.172 28 C -0.177 4.177 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.132 0.868 32 H 0.141 0.859 33 H 0.096 0.904 34 H 0.220 0.780 35 H -0.214 1.214 36 H -0.191 1.191 37 H 0.143 0.857 38 H 0.145 0.855 39 H 0.262 0.738 40 H 0.146 0.854 41 H 0.111 0.889 42 H 0.134 0.866 43 H 0.168 0.832 44 H 0.253 0.747 45 H 0.225 0.775 46 H 0.061 0.939 47 H 0.119 0.881 48 H 0.193 0.807 49 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -10.705 3.915 -6.459 13.101 hybrid contribution -1.919 1.942 -0.033 2.731 sum -12.625 5.857 -6.492 15.357 Atomic orbital electron populations 1.23391 0.75948 1.05735 1.02655 1.86080 1.23892 1.26663 1.89008 1.18990 0.91682 0.85669 0.99364 1.20153 0.92910 0.96854 1.06169 1.19551 0.96790 0.90647 1.05039 1.25390 0.91243 1.14194 0.88509 1.86654 1.73942 1.42256 1.32259 0.92486 0.90048 0.69797 0.76440 1.18700 0.91607 0.84270 1.00238 1.86099 1.35436 1.11704 1.89245 1.22784 0.92716 0.81791 1.06949 1.20555 0.88328 0.85669 0.75610 1.90781 1.16827 1.87374 1.49935 1.45621 1.11273 1.03776 1.74401 1.22470 0.95984 0.83032 0.97403 0.89427 1.23292 1.02373 0.90849 0.98056 1.22525 0.99747 0.93537 0.97843 0.89736 1.22605 0.93312 0.94040 0.90119 1.47889 1.33491 1.07135 1.19545 1.24431 1.04924 0.85442 1.03833 1.24228 1.02999 0.99517 0.96487 1.75101 1.20378 0.98650 1.24999 1.78268 1.10465 1.22698 0.98609 1.23530 1.02763 0.95052 0.96750 1.21471 0.92069 1.00057 1.03584 1.21443 1.01701 0.90665 1.03879 0.91221 0.91058 0.86760 0.85914 0.90395 0.78026 1.21418 1.19100 0.85718 0.85521 0.73791 0.85437 0.88945 0.86554 0.83197 0.74713 0.77505 0.93874 0.88092 0.80659 0.81602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.15 10.50 -93.36 -0.98 -3.13 16 3 C 0.09 0.58 6.69 22.49 0.15 0.73 16 4 C -0.14 -1.43 8.59 22.35 0.19 -1.24 16 5 C -0.12 -1.05 5.28 -19.78 -0.10 -1.15 16 6 C -0.09 -0.75 2.33 71.24 0.17 -0.58 16 7 O -0.54 -5.87 12.65 -148.98 -1.89 -7.75 16 8 Si 0.81 4.99 30.40 68.60 2.09 7.07 16 9 C 0.10 0.41 6.62 22.49 0.15 0.56 16 10 O -0.31 -1.26 8.56 -74.36 -0.64 -1.90 16 11 C 0.04 -0.19 5.22 71.24 0.37 0.18 16 12 C 0.51 0.17 7.91 87.66 0.69 0.87 16 13 O -0.57 -7.22 16.10 16.01 0.26 -6.97 16 14 N -0.70 5.30 5.35 -440.03 -2.36 2.94 16 15 C 0.12 -0.58 4.24 45.52 0.19 -0.39 16 16 H 0.09 0.18 7.46 -2.39 -0.02 0.16 16 17 C -0.11 1.42 7.39 31.12 0.23 1.65 16 18 C -0.12 0.97 3.76 -10.27 -0.04 0.93 16 19 H 0.08 -0.34 8.14 -2.38 -0.02 -0.36 16 20 C 0.12 -1.33 6.29 86.38 0.54 -0.79 16 21 N -0.29 0.44 3.44 -347.75 -1.20 -0.75 16 22 C -0.03 0.15 11.57 83.49 0.97 1.12 16 23 C -0.07 -0.16 12.05 83.73 1.01 0.85 16 24 N -0.33 -3.69 12.41 -58.26 -0.72 -4.42 16 25 N -0.12 -1.03 12.93 37.02 0.48 -0.55 16 26 C -0.14 0.49 7.43 31.12 0.23 0.72 16 27 C -0.15 0.29 9.03 22.36 0.20 0.50 16 28 C -0.16 0.04 9.03 22.36 0.20 0.24 16 29 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 30 H 0.07 -0.48 7.66 -2.39 -0.02 -0.49 16 31 H 0.11 -0.71 8.14 -2.39 -0.02 -0.73 16 32 H 0.12 1.43 4.93 -2.91 -0.01 1.42 16 33 H 0.08 0.65 7.82 -2.39 -0.02 0.63 16 34 H 0.37 3.07 8.59 -74.06 -0.64 2.43 16 35 H -0.29 -3.37 6.81 99.48 0.68 -2.69 16 36 H -0.27 -2.22 7.11 99.48 0.71 -1.52 16 37 H 0.13 -1.46 7.65 -2.38 -0.02 -1.48 16 38 H 0.13 -1.55 7.67 -2.39 -0.02 -1.56 16 39 H 0.42 -6.91 8.73 -92.70 -0.81 -7.72 16 40 H 0.13 -2.48 8.08 -2.39 -0.02 -2.50 16 41 H 0.09 -1.24 8.14 -2.39 -0.02 -1.26 16 42 H 0.12 -1.59 7.84 -2.39 -0.02 -1.61 16 43 H 0.15 -2.85 8.07 -2.39 -0.02 -2.87 16 44 H 0.24 -3.52 8.06 -2.91 -0.02 -3.55 16 45 H 0.21 -0.79 8.06 -2.91 -0.02 -0.81 16 46 H 0.04 0.20 8.14 -2.39 -0.02 0.18 16 47 H 0.10 -0.60 7.90 -2.38 -0.02 -0.62 16 48 H 0.18 -1.92 6.29 -2.92 -0.02 -1.93 16 49 H 0.17 -1.14 6.29 -2.91 -0.02 -1.16 16 Total: 0.00 -39.60 410.84 0.89 -38.71 By element: Atomic # 1 Polarization: -28.08 SS G_CDS: -0.42 Total: -28.50 kcal Atomic # 6 Polarization: -1.02 SS G_CDS: 6.27 Total: 5.25 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -3.80 Total: -2.78 kcal Atomic # 8 Polarization: -16.51 SS G_CDS: -3.24 Total: -19.75 kcal Atomic # 14 Polarization: 4.99 SS G_CDS: 2.09 Total: 7.07 kcal Total: -39.60 0.89 -38.71 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.153 kcal (2) G-P(sol) polarization free energy of solvation -39.601 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.711 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds