Wall clock time and date at job start Tue Mar 9 2021 12:51:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35987 * 117.00113 * 2 1 4 4 C 1.39151 * 120.07278 * 179.97438 * 3 2 1 5 5 O 1.35991 * 120.07378 * 0.04177 * 4 3 2 6 6 C 1.42903 * 117.00331 * 179.97438 * 5 4 3 7 7 C 1.50698 * 109.47630 * 180.02562 * 6 5 4 8 8 O 1.21281 * 119.99769 * 0.02562 * 7 6 5 9 9 N 1.34770 * 120.00197 * 179.97438 * 7 6 5 10 10 C 1.46506 * 120.00129 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.84460 * 23.80391 * 10 9 7 12 12 C 1.53776 * 113.61575 * 155.00366 * 10 9 7 13 13 C 1.53776 * 87.08156 * 139.98547 * 12 10 9 14 14 H 1.08994 * 113.61984 * 89.12089 * 13 12 10 15 15 C 1.53002 * 113.61138 * 219.93770 * 13 12 10 16 16 N 1.46504 * 109.46976 * 184.99832 * 15 13 12 17 17 C 1.35314 * 125.86690 * 124.71233 * 16 15 13 18 18 C 1.35353 * 106.17343 * 179.90347 * 17 16 15 19 19 N 1.33771 * 106.49373 * 0.35471 * 18 17 16 20 20 N 1.28627 * 108.88700 * 359.77119 * 19 18 17 21 21 C 1.53782 * 113.61661 * 252.50453 * 10 9 7 22 22 C 1.38567 * 119.85390 * 180.02562 * 4 3 2 23 23 C 1.38245 * 119.99870 * 359.72061 * 22 4 3 24 24 C 1.38255 * 120.14566 * 0.55853 * 23 22 4 25 25 C 1.50699 * 119.92682 * 179.72161 * 24 23 22 26 26 O 1.42901 * 109.46830 * 119.72111 * 25 24 23 27 27 Si 1.86298 * 109.46950 * 359.72548 * 25 24 23 28 28 C 1.38241 * 120.14388 * 359.44082 * 24 23 22 29 29 H 1.08997 * 109.46753 * 299.99593 * 1 2 3 30 30 H 1.08999 * 109.47187 * 59.99607 * 1 2 3 31 31 H 1.09004 * 109.46971 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.47234 * 300.01041 * 6 5 4 33 33 H 1.08999 * 109.46599 * 60.00357 * 6 5 4 34 34 H 0.96996 * 120.00091 * 0.02562 * 9 7 6 35 35 H 1.08998 * 113.61336 * 254.53608 * 12 10 9 36 36 H 1.08999 * 113.61291 * 25.43346 * 12 10 9 37 37 H 1.09003 * 109.47029 * 304.99524 * 15 13 12 38 38 H 1.08997 * 109.47463 * 64.99621 * 15 13 12 39 39 H 1.08000 * 126.91194 * 0.02562 * 17 16 15 40 40 H 1.07996 * 126.75038 * 180.12109 * 18 17 16 41 41 H 1.09005 * 113.61130 * 334.56168 * 21 10 9 42 42 H 1.08994 * 113.61349 * 105.46630 * 21 10 9 43 43 H 1.07998 * 120.00095 * 180.02562 * 22 4 3 44 44 H 1.08004 * 119.92701 * 180.29323 * 23 22 4 45 45 H 1.08991 * 109.47351 * 239.72258 * 25 24 23 46 46 H 0.96708 * 114.00246 * 299.99864 * 26 25 24 47 47 H 1.48506 * 109.99834 * 180.02562 * 27 25 24 48 48 H 1.48502 * 110.00011 * 301.31529 * 27 25 24 49 49 H 1.08000 * 119.99962 * 180.25893 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4359 1.2862 0.0005 5 8 4.1795 0.1476 0.0002 6 6 5.6003 0.3005 0.0002 7 6 6.2519 -1.0584 -0.0008 8 8 5.5670 -2.0593 -0.0019 9 7 7.5957 -1.1614 -0.0015 10 6 8.2291 -2.4824 -0.0030 11 1 7.5832 -3.2610 -0.4090 12 6 9.6467 -2.4852 -0.5990 13 6 10.0321 -3.4621 0.5242 14 1 9.8797 -4.5094 0.2635 15 6 11.4147 -3.1938 1.1221 16 7 11.7382 -4.2415 2.0937 17 6 12.8414 -5.0249 2.0770 18 6 12.7379 -5.8448 3.1489 19 7 11.5877 -5.5323 3.7564 20 7 11.0193 -4.5788 3.1066 21 6 8.8780 -2.8561 1.3402 22 6 4.0603 2.5232 0.0011 23 6 3.3030 3.6798 -0.0048 24 6 1.9224 3.6057 0.0005 25 6 1.1017 4.8696 0.0004 26 8 0.2778 4.9024 -1.1667 27 14 2.2366 6.3469 0.0011 28 6 1.2933 2.3747 0.0000 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 5.9066 0.8506 -0.8895 33 1 5.9065 0.8499 0.8904 34 1 8.1434 -0.3609 -0.0009 35 1 9.7003 -2.9228 -1.5959 36 1 10.1506 -1.5211 -0.5313 37 1 12.1604 -3.1928 0.3270 38 1 11.4133 -2.2243 1.6202 39 1 13.6441 -4.9996 1.3548 40 1 13.4431 -6.6046 3.4519 41 1 9.1719 -1.9933 1.9380 42 1 8.3111 -3.5932 1.9088 43 1 5.1386 2.5839 0.0011 44 1 3.7909 4.6433 -0.0091 45 1 0.4726 4.8943 0.8901 46 1 0.7720 4.8830 -1.9977 47 1 1.4394 7.5998 0.0016 48 1 3.1208 6.3077 1.1935 49 1 0.2147 2.3196 -0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:59 Heat of formation + Delta-G solvation = 30.894252 kcal Electronic energy + Delta-G solvation = -32775.981550 eV Core-core repulsion = 28095.733018 eV Total energy + Delta-G solvation = -4680.248532 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -44.15532 -41.82420 -41.27084 -39.99583 -39.03952 -38.79543 -36.93597 -35.84732 -34.37995 -32.05604 -31.93529 -31.47209 -30.23825 -29.07239 -28.40878 -26.97822 -26.24085 -24.85890 -23.60838 -23.45395 -22.62297 -22.28454 -21.69654 -20.95306 -19.78672 -18.84695 -18.50571 -18.31214 -17.88769 -17.57701 -17.51477 -17.15380 -16.84223 -16.61249 -16.36127 -16.11034 -15.94744 -15.87410 -15.67076 -15.59520 -15.39601 -15.23156 -14.75274 -14.46014 -14.28562 -13.95072 -13.76279 -13.71130 -13.65320 -13.55106 -13.25622 -12.67081 -12.61425 -12.52414 -12.44905 -12.23080 -12.13409 -12.07374 -12.01771 -11.89973 -11.74828 -11.58088 -11.05401 -10.86229 -10.48859 -10.31127 -10.19476 -9.79427 -8.85721 -5.08421 0.16649 0.28833 0.65759 1.25073 1.30641 1.43977 1.47106 1.58691 1.70285 1.93154 2.31665 2.50763 2.56544 3.02144 3.16570 3.30673 3.39835 3.44147 3.47364 3.58036 3.62264 3.73709 3.77835 3.79442 3.85423 3.90088 3.92331 3.97346 4.11965 4.13001 4.24897 4.29412 4.30994 4.34027 4.39921 4.47211 4.47744 4.50797 4.56369 4.65573 4.67748 4.76955 4.96146 4.98861 4.99120 5.08715 5.24084 5.34341 5.35946 5.54647 5.60143 5.95549 6.28733 6.52864 6.54373 7.08003 7.61028 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.108 3.892 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.517 3.483 8 O -0.507 6.507 9 N -0.719 5.719 10 C 0.126 3.874 11 H 0.120 0.880 12 C -0.134 4.134 13 C -0.123 4.123 14 H 0.104 0.896 15 C 0.126 3.874 16 N -0.291 5.291 17 C -0.054 4.054 18 C -0.051 4.051 19 N -0.273 5.273 20 N -0.078 5.078 21 C -0.139 4.139 22 C -0.169 4.169 23 C -0.114 4.114 24 C -0.115 4.115 25 C -0.066 4.066 26 O -0.541 6.541 27 Si 0.691 3.309 28 C -0.146 4.146 29 H 0.055 0.945 30 H 0.057 0.943 31 H 0.103 0.897 32 H 0.095 0.905 33 H 0.094 0.906 34 H 0.402 0.598 35 H 0.085 0.915 36 H 0.094 0.906 37 H 0.110 0.890 38 H 0.102 0.898 39 H 0.190 0.810 40 H 0.190 0.810 41 H 0.090 0.910 42 H 0.082 0.918 43 H 0.139 0.861 44 H 0.132 0.868 45 H 0.113 0.887 46 H 0.379 0.621 47 H -0.255 1.255 48 H -0.258 1.258 49 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.313 5.232 -6.133 10.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.062 3.938 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.301 3.699 8 O -0.379 6.379 9 N -0.372 5.372 10 C 0.021 3.979 11 H 0.138 0.862 12 C -0.173 4.173 13 C -0.142 4.142 14 H 0.122 0.878 15 C 0.005 3.995 16 N -0.085 5.085 17 C -0.204 4.204 18 C -0.208 4.208 19 N -0.139 5.139 20 N -0.059 5.059 21 C -0.178 4.178 22 C -0.188 4.188 23 C -0.132 4.132 24 C -0.116 4.116 25 C -0.177 4.177 26 O -0.346 6.346 27 Si 0.593 3.407 28 C -0.165 4.165 29 H 0.074 0.926 30 H 0.076 0.924 31 H 0.121 0.879 32 H 0.113 0.887 33 H 0.112 0.888 34 H 0.237 0.763 35 H 0.103 0.897 36 H 0.112 0.888 37 H 0.128 0.872 38 H 0.120 0.880 39 H 0.207 0.793 40 H 0.207 0.793 41 H 0.108 0.892 42 H 0.101 0.899 43 H 0.157 0.843 44 H 0.149 0.851 45 H 0.131 0.869 46 H 0.227 0.773 47 H -0.180 1.180 48 H -0.183 1.183 49 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 5.264 5.126 -4.483 8.607 hybrid contribution 1.070 0.069 -0.332 1.122 sum 6.334 5.195 -4.814 9.502 Atomic orbital electron populations 1.23135 0.78088 1.04427 1.01374 1.86250 1.21359 1.25336 1.88515 1.18284 0.89022 0.85575 1.00963 1.18278 0.88315 0.85763 1.01859 1.86283 1.16018 1.27745 1.88863 1.22486 0.81359 0.96265 1.03960 1.20070 0.82565 0.90576 0.76671 1.90807 1.62593 1.38036 1.46507 1.45763 1.05871 1.09224 1.76361 1.22507 0.92651 0.85641 0.97111 0.86240 1.23374 0.95381 0.99859 0.98685 1.22652 0.92850 1.01075 0.97650 0.87791 1.22179 0.98599 0.88857 0.89835 1.47532 1.14849 1.25990 1.20164 1.23746 0.94934 0.97399 1.04337 1.23691 0.98149 1.03555 0.95424 1.75178 1.07256 1.08337 1.23098 1.78351 1.18885 1.11774 0.96840 1.23534 0.96053 1.01400 0.96815 1.20984 1.00431 0.90684 1.06702 1.20685 0.92780 0.97842 1.01899 1.20042 0.93697 0.95208 1.02638 1.25038 0.99562 1.01847 0.91256 1.86501 1.35747 1.96937 1.15407 0.94716 0.80874 0.76553 0.88564 1.20936 1.00431 0.90397 1.04752 0.92609 0.92413 0.87851 0.88721 0.88813 0.76294 0.89678 0.88789 0.87215 0.88025 0.79254 0.79315 0.89168 0.89934 0.84317 0.85065 0.86916 0.77321 1.17991 1.18250 0.84153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.35 10.28 -34.21 -0.35 -1.70 16 3 C 0.11 0.36 6.70 -39.12 -0.26 0.10 16 4 C 0.10 0.27 6.70 -39.12 -0.26 0.00 16 5 O -0.28 -1.05 9.45 -47.34 -0.45 -1.49 16 6 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 7 C 0.52 0.62 7.91 -10.99 -0.09 0.53 16 8 O -0.51 -3.41 16.10 -14.35 -0.23 -3.64 16 9 N -0.72 1.90 5.35 -53.02 -0.28 1.62 16 10 C 0.13 -0.26 4.24 -67.12 -0.28 -0.55 16 11 H 0.12 0.04 7.46 -51.93 -0.39 -0.35 16 12 C -0.13 0.69 7.39 -25.92 -0.19 0.50 16 13 C -0.12 0.43 3.76 -89.81 -0.34 0.09 16 14 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 15 C 0.13 -0.53 6.29 -4.04 -0.03 -0.55 16 16 N -0.29 0.04 3.44 -61.26 -0.21 -0.17 16 17 C -0.05 0.06 11.57 -17.05 -0.20 -0.13 16 18 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 19 N -0.27 -1.35 12.41 30.23 0.38 -0.98 16 20 N -0.08 -0.30 12.93 60.35 0.78 0.48 16 21 C -0.14 0.24 7.43 -25.92 -0.19 0.05 16 22 C -0.17 0.09 9.04 -39.46 -0.36 -0.27 16 23 C -0.11 0.09 8.66 -39.57 -0.34 -0.25 16 24 C -0.12 -0.03 5.39 -104.61 -0.56 -0.59 16 25 C -0.07 0.03 2.82 36.01 0.10 0.13 16 26 O -0.54 0.03 12.77 -35.23 -0.45 -0.42 16 27 Si 0.69 -1.07 29.78 -169.99 -5.06 -6.14 16 28 C -0.15 -0.22 8.60 -39.46 -0.34 -0.56 16 29 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 30 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 31 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.09 -0.39 7.66 -51.93 -0.40 -0.79 16 33 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 34 H 0.40 -2.52 8.73 -40.82 -0.36 -2.87 16 35 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 36 H 0.09 -0.67 8.08 -51.93 -0.42 -1.08 16 37 H 0.11 -0.76 8.07 -51.93 -0.42 -1.18 16 38 H 0.10 -0.52 7.85 -51.93 -0.41 -0.92 16 39 H 0.19 -1.00 8.06 -52.49 -0.42 -1.42 16 40 H 0.19 -0.34 8.06 -52.49 -0.42 -0.76 16 41 H 0.09 -0.22 7.90 -51.93 -0.41 -0.63 16 42 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 43 H 0.14 -0.52 6.30 -52.49 -0.33 -0.86 16 44 H 0.13 -0.40 4.87 -52.48 -0.26 -0.66 16 45 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 46 H 0.38 -1.46 8.70 45.56 0.40 -1.07 16 47 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 48 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 49 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 411.86 15.07 6.21 6.21 Total: 0.00 -15.17 411.86 -8.71 -23.88 By element: Atomic # 1 Polarization: -10.36 SS G_CDS: -6.66 Total: -17.02 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -2.38 Total: -0.63 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: 0.66 Total: 0.96 kcal Atomic # 8 Polarization: -5.78 SS G_CDS: -1.48 Total: -7.26 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.14 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -15.17 -8.71 -23.88 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.774 kcal (2) G-P(sol) polarization free energy of solvation -15.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.880 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds