Wall clock time and date at job start Tue Mar 9 2021 12:51:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35987 * 117.00113 * 2 1 4 4 C 1.39151 * 120.07278 * 179.97438 * 3 2 1 5 5 O 1.35991 * 120.07378 * 0.04177 * 4 3 2 6 6 C 1.42903 * 117.00331 * 179.97438 * 5 4 3 7 7 C 1.50698 * 109.47630 * 180.02562 * 6 5 4 8 8 O 1.21281 * 119.99769 * 0.02562 * 7 6 5 9 9 N 1.34770 * 120.00197 * 179.97438 * 7 6 5 10 10 C 1.46506 * 120.00129 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.84460 * 23.80391 * 10 9 7 12 12 C 1.53776 * 113.61575 * 155.00366 * 10 9 7 13 13 C 1.53776 * 87.08156 * 139.98547 * 12 10 9 14 14 H 1.08994 * 113.61984 * 89.12089 * 13 12 10 15 15 C 1.53002 * 113.61138 * 219.93770 * 13 12 10 16 16 N 1.46504 * 109.46976 * 184.99832 * 15 13 12 17 17 C 1.35314 * 125.86690 * 124.71233 * 16 15 13 18 18 C 1.35353 * 106.17343 * 179.90347 * 17 16 15 19 19 N 1.33771 * 106.49373 * 0.35471 * 18 17 16 20 20 N 1.28627 * 108.88700 * 359.77119 * 19 18 17 21 21 C 1.53782 * 113.61661 * 252.50453 * 10 9 7 22 22 C 1.38567 * 119.85390 * 180.02562 * 4 3 2 23 23 C 1.38245 * 119.99870 * 359.72061 * 22 4 3 24 24 C 1.38255 * 120.14566 * 0.55853 * 23 22 4 25 25 C 1.50699 * 119.92682 * 179.72161 * 24 23 22 26 26 O 1.42901 * 109.46830 * 119.72111 * 25 24 23 27 27 Si 1.86298 * 109.46950 * 359.72548 * 25 24 23 28 28 C 1.38241 * 120.14388 * 359.44082 * 24 23 22 29 29 H 1.08997 * 109.46753 * 299.99593 * 1 2 3 30 30 H 1.08999 * 109.47187 * 59.99607 * 1 2 3 31 31 H 1.09004 * 109.46971 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.47234 * 300.01041 * 6 5 4 33 33 H 1.08999 * 109.46599 * 60.00357 * 6 5 4 34 34 H 0.96996 * 120.00091 * 0.02562 * 9 7 6 35 35 H 1.08998 * 113.61336 * 254.53608 * 12 10 9 36 36 H 1.08999 * 113.61291 * 25.43346 * 12 10 9 37 37 H 1.09003 * 109.47029 * 304.99524 * 15 13 12 38 38 H 1.08997 * 109.47463 * 64.99621 * 15 13 12 39 39 H 1.08000 * 126.91194 * 0.02562 * 17 16 15 40 40 H 1.07996 * 126.75038 * 180.12109 * 18 17 16 41 41 H 1.09005 * 113.61130 * 334.56168 * 21 10 9 42 42 H 1.08994 * 113.61349 * 105.46630 * 21 10 9 43 43 H 1.07998 * 120.00095 * 180.02562 * 22 4 3 44 44 H 1.08004 * 119.92701 * 180.29323 * 23 22 4 45 45 H 1.08991 * 109.47351 * 239.72258 * 25 24 23 46 46 H 0.96708 * 114.00246 * 299.99864 * 26 25 24 47 47 H 1.48506 * 109.99834 * 180.02562 * 27 25 24 48 48 H 1.48502 * 110.00011 * 301.31529 * 27 25 24 49 49 H 1.08000 * 119.99962 * 180.25893 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4359 1.2862 0.0005 5 8 4.1795 0.1476 0.0002 6 6 5.6003 0.3005 0.0002 7 6 6.2519 -1.0584 -0.0008 8 8 5.5670 -2.0593 -0.0019 9 7 7.5957 -1.1614 -0.0015 10 6 8.2291 -2.4824 -0.0030 11 1 7.5832 -3.2610 -0.4090 12 6 9.6467 -2.4852 -0.5990 13 6 10.0321 -3.4621 0.5242 14 1 9.8797 -4.5094 0.2635 15 6 11.4147 -3.1938 1.1221 16 7 11.7382 -4.2415 2.0937 17 6 12.8414 -5.0249 2.0770 18 6 12.7379 -5.8448 3.1489 19 7 11.5877 -5.5323 3.7564 20 7 11.0193 -4.5788 3.1066 21 6 8.8780 -2.8561 1.3402 22 6 4.0603 2.5232 0.0011 23 6 3.3030 3.6798 -0.0048 24 6 1.9224 3.6057 0.0005 25 6 1.1017 4.8696 0.0004 26 8 0.2778 4.9024 -1.1667 27 14 2.2366 6.3469 0.0011 28 6 1.2933 2.3747 0.0000 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 5.9066 0.8506 -0.8895 33 1 5.9065 0.8499 0.8904 34 1 8.1434 -0.3609 -0.0009 35 1 9.7003 -2.9228 -1.5959 36 1 10.1506 -1.5211 -0.5313 37 1 12.1604 -3.1928 0.3270 38 1 11.4133 -2.2243 1.6202 39 1 13.6441 -4.9996 1.3548 40 1 13.4431 -6.6046 3.4519 41 1 9.1719 -1.9933 1.9380 42 1 8.3111 -3.5932 1.9088 43 1 5.1386 2.5839 0.0011 44 1 3.7909 4.6433 -0.0091 45 1 0.4726 4.8943 0.8901 46 1 0.7720 4.8830 -1.9977 47 1 1.4394 7.5998 0.0016 48 1 3.1208 6.3077 1.1935 49 1 0.2147 2.3196 -0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:58 Heat of formation + Delta-G solvation = 23.172194 kcal Electronic energy + Delta-G solvation = -32776.316404 eV Core-core repulsion = 28095.733018 eV Total energy + Delta-G solvation = -4680.583385 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -44.14659 -41.84561 -41.22184 -39.96342 -39.12110 -38.81267 -36.92471 -35.80047 -34.37771 -32.04650 -31.92048 -31.46988 -30.15948 -28.95444 -28.44162 -26.73718 -26.21861 -24.77223 -23.60636 -23.42786 -22.63500 -22.22731 -21.67754 -20.75283 -19.80244 -18.75195 -18.46807 -18.32516 -17.88180 -17.53710 -17.47694 -17.15139 -16.78304 -16.68854 -16.24332 -16.09388 -15.87725 -15.81237 -15.67533 -15.52565 -15.36808 -15.19445 -14.72441 -14.33352 -14.30572 -13.79546 -13.73669 -13.60100 -13.49459 -13.44530 -13.13708 -12.66248 -12.61150 -12.55429 -12.28641 -12.18500 -12.07092 -12.01796 -11.98619 -11.91827 -11.73761 -11.41800 -11.03690 -10.93119 -10.44093 -10.30547 -10.13152 -9.79580 -8.92061 -4.96858 0.16045 0.27072 0.71185 1.33828 1.43184 1.47863 1.57679 1.64740 1.67201 2.00365 2.29634 2.55752 2.58759 3.30726 3.43277 3.48194 3.50126 3.62496 3.66741 3.69298 3.75891 3.86257 3.90639 4.03015 4.04174 4.12659 4.13140 4.17001 4.27129 4.28099 4.28327 4.35349 4.35745 4.37046 4.49282 4.62876 4.63990 4.68481 4.70862 4.79959 4.85847 4.96245 4.99780 5.05840 5.11582 5.14892 5.29328 5.36384 5.50714 5.59210 5.75149 5.96261 6.42098 6.54507 6.77601 7.15940 7.56889 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.336 6.336 3 C 0.075 3.925 4 C 0.084 3.916 5 O -0.316 6.316 6 C 0.034 3.966 7 C 0.510 3.490 8 O -0.578 6.578 9 N -0.695 5.695 10 C 0.114 3.886 11 H 0.085 0.915 12 C -0.105 4.105 13 C -0.116 4.116 14 H 0.083 0.917 15 C 0.119 3.881 16 N -0.286 5.286 17 C -0.034 4.034 18 C -0.075 4.075 19 N -0.327 5.327 20 N -0.122 5.122 21 C -0.143 4.143 22 C -0.158 4.158 23 C -0.110 4.110 24 C -0.119 4.119 25 C -0.078 4.078 26 O -0.558 6.558 27 Si 0.790 3.210 28 C -0.153 4.153 29 H 0.061 0.939 30 H 0.066 0.934 31 H 0.110 0.890 32 H 0.133 0.867 33 H 0.126 0.874 34 H 0.425 0.575 35 H 0.092 0.908 36 H 0.130 0.870 37 H 0.152 0.848 38 H 0.117 0.883 39 H 0.237 0.763 40 H 0.208 0.792 41 H 0.102 0.898 42 H 0.040 0.960 43 H 0.178 0.822 44 H 0.160 0.840 45 H 0.103 0.897 46 H 0.396 0.604 47 H -0.303 1.303 48 H -0.278 1.278 49 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.791 8.036 -7.849 15.577 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.250 6.250 3 C 0.030 3.970 4 C 0.038 3.962 5 O -0.230 6.230 6 C -0.043 4.043 7 C 0.296 3.704 8 O -0.456 6.456 9 N -0.349 5.349 10 C 0.009 3.991 11 H 0.103 0.897 12 C -0.144 4.144 13 C -0.136 4.136 14 H 0.102 0.898 15 C 0.000 4.000 16 N -0.080 5.080 17 C -0.186 4.186 18 C -0.233 4.233 19 N -0.192 5.192 20 N -0.101 5.101 21 C -0.182 4.182 22 C -0.176 4.176 23 C -0.127 4.127 24 C -0.120 4.120 25 C -0.187 4.187 26 O -0.366 6.366 27 Si 0.695 3.305 28 C -0.172 4.172 29 H 0.080 0.920 30 H 0.084 0.916 31 H 0.129 0.871 32 H 0.151 0.849 33 H 0.143 0.857 34 H 0.264 0.736 35 H 0.111 0.889 36 H 0.148 0.852 37 H 0.169 0.831 38 H 0.135 0.865 39 H 0.253 0.747 40 H 0.225 0.775 41 H 0.120 0.880 42 H 0.059 0.941 43 H 0.195 0.805 44 H 0.177 0.823 45 H 0.120 0.880 46 H 0.246 0.754 47 H -0.232 1.232 48 H -0.205 1.205 49 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 8.770 7.954 -6.216 13.372 hybrid contribution -0.012 -0.781 0.187 0.803 sum 8.758 7.173 -6.029 12.826 Atomic orbital electron populations 1.23275 0.76850 1.05159 1.02073 1.86189 1.22973 1.26743 1.89113 1.18691 0.89995 0.85565 1.02748 1.18604 0.88163 0.86603 1.02784 1.86228 1.18369 1.29113 1.89304 1.22810 0.79266 0.95122 1.07142 1.20683 0.83392 0.90826 0.75466 1.90780 1.64310 1.40408 1.50124 1.45602 1.04912 1.10015 1.74392 1.22477 0.93926 0.85213 0.97489 0.89732 1.23288 0.92111 1.00925 0.98029 1.22521 0.92853 1.00396 0.97851 0.89825 1.22615 0.98853 0.88392 0.90182 1.47897 1.14524 1.26130 1.19486 1.24440 0.94969 0.95382 1.03791 1.24230 0.97738 1.04884 0.96409 1.75094 1.09269 1.09740 1.25084 1.78269 1.20347 1.12795 0.98733 1.23539 0.96870 1.01002 0.96768 1.21395 1.02338 0.89211 1.04685 1.21022 0.92240 0.99053 1.00413 1.20212 0.94554 0.94776 1.02437 1.25290 0.99840 1.02566 0.90980 1.86464 1.36795 1.96944 1.16376 0.93632 0.78225 0.72295 0.86334 1.20998 1.00468 0.90610 1.05100 0.91994 0.91577 0.87149 0.84913 0.85669 0.73621 0.88893 0.85211 0.83064 0.86468 0.74650 0.77494 0.87980 0.94099 0.80463 0.82265 0.87964 0.75450 1.23184 1.20505 0.84274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.07 9.81 113.37 1.11 1.18 16 2 O -0.34 -4.03 10.28 -79.54 -0.82 -4.85 16 3 C 0.08 0.65 6.70 22.57 0.15 0.80 16 4 C 0.08 0.47 6.70 22.57 0.15 0.62 16 5 O -0.32 -2.78 9.45 -67.03 -0.63 -3.42 16 6 C 0.03 -0.10 5.22 71.24 0.37 0.27 16 7 C 0.51 1.71 7.91 87.66 0.69 2.40 16 8 O -0.58 -9.83 16.10 16.00 0.26 -9.58 16 9 N -0.70 4.04 5.35 -440.04 -2.36 1.69 16 10 C 0.11 -0.39 4.24 45.52 0.19 -0.19 16 11 H 0.08 0.34 7.46 -2.39 -0.02 0.33 16 12 C -0.11 1.30 7.39 31.12 0.23 1.53 16 13 C -0.12 0.87 3.76 -10.27 -0.04 0.83 16 14 H 0.08 -0.26 8.14 -2.39 -0.02 -0.27 16 15 C 0.12 -1.28 6.29 86.38 0.54 -0.73 16 16 N -0.29 0.29 3.44 -347.72 -1.20 -0.90 16 17 C -0.03 0.14 11.57 83.49 0.97 1.11 16 18 C -0.07 -0.19 12.05 83.73 1.01 0.82 16 19 N -0.33 -3.88 12.41 -58.26 -0.72 -4.60 16 20 N -0.12 -1.12 12.93 37.02 0.48 -0.64 16 21 C -0.14 0.30 7.43 31.12 0.23 0.53 16 22 C -0.16 0.48 9.04 22.35 0.20 0.68 16 23 C -0.11 0.40 8.66 22.28 0.19 0.59 16 24 C -0.12 -0.02 5.39 -19.86 -0.11 -0.13 16 25 C -0.08 0.09 2.82 71.24 0.20 0.29 16 26 O -0.56 0.11 12.77 -148.98 -1.90 -1.80 16 27 Si 0.79 -3.50 29.78 68.60 2.04 -1.46 16 28 C -0.15 -0.65 8.60 22.35 0.19 -0.46 16 29 H 0.06 0.08 7.66 -2.39 -0.02 0.06 16 30 H 0.07 0.06 7.66 -2.39 -0.02 0.04 16 31 H 0.11 0.09 8.14 -2.38 -0.02 0.07 16 32 H 0.13 -1.48 7.66 -2.39 -0.02 -1.50 16 33 H 0.13 -1.22 7.66 -2.39 -0.02 -1.24 16 34 H 0.42 -6.46 8.73 -92.71 -0.81 -7.27 16 35 H 0.09 -1.18 8.14 -2.39 -0.02 -1.20 16 36 H 0.13 -2.46 8.08 -2.39 -0.02 -2.48 16 37 H 0.15 -2.83 8.07 -2.39 -0.02 -2.85 16 38 H 0.12 -1.56 7.85 -2.39 -0.02 -1.57 16 39 H 0.24 -3.47 8.06 -2.91 -0.02 -3.49 16 40 H 0.21 -0.71 8.06 -2.91 -0.02 -0.74 16 41 H 0.10 -0.50 7.90 -2.38 -0.02 -0.52 16 42 H 0.04 0.26 8.14 -2.39 -0.02 0.24 16 43 H 0.18 -2.09 6.30 -2.91 -0.02 -2.10 16 44 H 0.16 -1.53 4.87 -2.91 -0.01 -1.55 16 45 H 0.10 0.06 7.96 -2.39 -0.02 0.04 16 46 H 0.40 -3.30 8.70 -74.05 -0.64 -3.95 16 47 H -0.30 -1.14 7.11 99.48 0.71 -0.43 16 48 H -0.28 0.23 7.11 99.48 0.71 0.94 16 49 H 0.14 0.44 6.30 -2.91 -0.02 0.43 16 Total: 0.00 -45.49 411.86 1.05 -44.44 By element: Atomic # 1 Polarization: -28.62 SS G_CDS: -0.40 Total: -29.02 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: 6.30 Total: 10.14 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -3.80 Total: -4.46 kcal Atomic # 8 Polarization: -16.54 SS G_CDS: -3.10 Total: -19.64 kcal Atomic # 14 Polarization: -3.50 SS G_CDS: 2.04 Total: -1.46 kcal Total: -45.49 1.05 -44.44 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.613 kcal (2) G-P(sol) polarization free energy of solvation -45.486 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.441 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds