Wall clock time and date at job start Tue Mar 9 2021 12:52:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46852 * 2 1 4 4 C 1.50696 * 109.47270 * 119.99935 * 2 1 3 5 5 C 1.35452 * 125.56682 * 244.97613 * 4 2 1 6 6 C 1.39830 * 107.87000 * 179.76305 * 5 4 2 7 7 C 1.37874 * 107.08015 * 0.41447 * 6 5 4 8 8 C 1.46678 * 126.22908 * 179.84739 * 7 6 5 9 9 O 1.21697 * 120.00627 * 359.69435 * 8 7 6 10 10 N 1.34782 * 119.99859 * 179.69506 * 8 7 6 11 11 C 1.46504 * 120.00014 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.90371 * 23.74582 * 11 10 8 13 13 C 1.53778 * 113.61214 * 154.99486 * 11 10 8 14 14 C 1.53787 * 87.08035 * 139.97990 * 13 11 10 15 15 H 1.09004 * 113.61202 * 89.11582 * 14 13 11 16 16 C 1.52992 * 113.61596 * 220.01776 * 14 13 11 17 17 N 1.46503 * 109.47166 * 184.99788 * 16 14 13 18 18 C 1.35308 * 125.86697 * 124.71605 * 17 16 14 19 19 C 1.35355 * 106.17511 * 179.90506 * 18 17 16 20 20 N 1.33767 * 106.49592 * 0.35204 * 19 18 17 21 21 N 1.28638 * 108.88700 * 359.77417 * 20 19 18 22 22 C 1.53778 * 113.61207 * 252.49389 * 11 10 8 23 23 N 1.35528 * 125.56513 * 64.99869 * 4 2 1 24 24 H 0.96708 * 114.00261 * 299.99716 * 1 2 3 25 25 H 1.08998 * 109.46692 * 240.00008 * 2 1 3 26 26 H 1.48501 * 109.99810 * 178.68517 * 3 2 1 27 27 H 1.48502 * 109.99802 * 299.99899 * 3 2 1 28 28 H 1.08008 * 126.06261 * 0.02562 * 5 4 2 29 29 H 1.08002 * 126.46181 * 180.26967 * 6 5 4 30 30 H 0.97001 * 120.00210 * 359.97438 * 10 8 7 31 31 H 1.08998 * 113.61879 * 25.43473 * 13 11 10 32 32 H 1.08997 * 113.69304 * 254.53559 * 13 11 10 33 33 H 1.08996 * 109.47544 * 305.00011 * 16 14 13 34 34 H 1.09007 * 109.47088 * 65.00447 * 16 14 13 35 35 H 1.08000 * 126.91400 * 0.02562 * 18 17 16 36 36 H 1.07999 * 126.74821 * 180.12523 * 19 18 17 37 37 H 1.08993 * 113.61229 * 105.47290 * 22 11 10 38 38 H 1.09000 * 113.61263 * 334.56940 * 22 11 10 39 39 H 0.97004 * 125.68011 * 359.95797 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6334 -0.1394 2.2383 6 6 2.9033 -1.1297 3.1879 7 6 2.3539 -2.3032 2.7166 8 6 2.3949 -3.6088 3.3837 9 8 2.9589 -3.7272 4.4556 10 7 1.8079 -4.6777 2.8095 11 6 1.8484 -5.9817 3.4760 12 1 1.9915 -5.9030 4.5538 13 6 0.6940 -6.9148 3.0744 14 6 1.7224 -8.0582 3.0748 15 1 1.8311 -8.5473 4.0429 16 6 1.5374 -9.0495 1.9242 17 7 2.4819 -10.1587 2.0786 18 6 2.1609 -11.4722 2.1275 19 6 3.3288 -12.1405 2.2740 20 7 4.2936 -11.2149 2.3149 21 7 3.7591 -10.0508 2.1965 22 6 2.7937 -6.9894 2.8010 23 7 1.7549 -2.0249 1.5090 24 1 -0.3934 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 3.5345 1.7704 0.0320 27 1 1.5614 2.4679 -1.2085 28 1 2.9284 0.8978 2.2998 29 1 3.4426 -1.0004 4.1147 30 1 1.3580 -4.5834 1.9553 31 1 0.2811 -6.6994 2.0889 32 1 -0.0734 -7.0176 3.8416 33 1 0.5182 -9.4356 1.9376 34 1 1.7222 -8.5442 0.9761 35 1 1.1721 -11.9013 2.0610 36 1 3.4563 -13.2105 2.3475 37 1 3.7221 -7.1515 3.3484 38 1 2.9548 -6.7943 1.7407 39 1 1.2844 -2.6634 0.9505 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_6580494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:10 Heat of formation + Delta-G solvation = 110.455019 kcal Electronic energy + Delta-G solvation = -23731.741507 eV Core-core repulsion = 20066.182841 eV Total energy + Delta-G solvation = -3665.558666 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.132 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -44.16856 -42.56383 -41.10295 -39.40272 -37.81354 -35.88556 -34.42880 -32.20173 -31.94895 -31.43773 -29.68696 -27.09165 -26.99543 -24.94424 -23.59143 -23.17347 -22.20681 -21.52853 -21.47580 -20.89320 -19.77268 -18.77692 -18.17517 -17.61811 -17.06555 -16.76155 -16.39938 -16.25676 -16.09334 -15.81093 -15.43794 -15.22767 -15.18435 -14.70582 -14.47171 -14.32047 -14.00419 -13.99247 -13.77912 -13.68456 -13.31012 -12.63573 -12.49738 -12.29229 -12.18713 -12.10456 -11.91476 -11.59987 -11.20389 -11.04250 -10.78152 -10.32464 -10.24524 -10.11014 -9.30106 -5.09255 0.32045 0.64348 1.07706 1.30398 1.50354 1.60902 1.68878 1.80783 1.95264 2.10454 2.33148 3.00382 3.14479 3.23941 3.32229 3.42653 3.49357 3.56873 3.71149 3.78090 3.84109 3.95680 4.11593 4.15643 4.23236 4.29637 4.34507 4.37916 4.45324 4.50287 4.65733 4.75227 4.93798 4.94578 4.99082 5.05435 5.22790 5.31412 5.56079 5.58701 5.79137 6.15264 6.32487 6.35954 7.06780 7.59531 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.055 4.055 3 Si 0.721 3.279 4 C 0.022 3.978 5 C -0.199 4.199 6 C -0.097 4.097 7 C -0.053 4.053 8 C 0.592 3.408 9 O -0.521 6.521 10 N -0.723 5.723 11 C 0.125 3.875 12 H 0.122 0.878 13 C -0.135 4.135 14 C -0.122 4.122 15 H 0.105 0.895 16 C 0.126 3.874 17 N -0.292 5.292 18 C -0.053 4.053 19 C -0.051 4.051 20 N -0.272 5.272 21 N -0.079 5.079 22 C -0.139 4.139 23 N -0.524 5.524 24 H 0.384 0.616 25 H 0.114 0.886 26 H -0.253 1.253 27 H -0.253 1.253 28 H 0.152 0.848 29 H 0.153 0.847 30 H 0.395 0.605 31 H 0.091 0.909 32 H 0.085 0.915 33 H 0.110 0.890 34 H 0.101 0.899 35 H 0.190 0.810 36 H 0.190 0.810 37 H 0.083 0.917 38 H 0.088 0.912 39 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.872 1.013 -2.106 8.211 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.166 4.166 3 Si 0.621 3.379 4 C -0.096 4.096 5 C -0.223 4.223 6 C -0.123 4.123 7 C -0.166 4.166 8 C 0.379 3.621 9 O -0.397 6.397 10 N -0.373 5.373 11 C 0.021 3.979 12 H 0.140 0.860 13 C -0.174 4.174 14 C -0.141 4.141 15 H 0.123 0.877 16 C 0.005 3.995 17 N -0.086 5.086 18 C -0.204 4.204 19 C -0.208 4.208 20 N -0.138 5.138 21 N -0.059 5.059 22 C -0.178 4.178 23 N -0.120 5.120 24 H 0.232 0.768 25 H 0.131 0.869 26 H -0.177 1.177 27 H -0.178 1.178 28 H 0.169 0.831 29 H 0.171 0.829 30 H 0.228 0.772 31 H 0.110 0.890 32 H 0.104 0.896 33 H 0.128 0.872 34 H 0.119 0.881 35 H 0.207 0.793 36 H 0.207 0.793 37 H 0.102 0.898 38 H 0.106 0.894 39 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -5.774 2.051 -2.309 6.548 hybrid contribution -1.501 -1.853 -0.968 2.574 sum -7.275 0.197 -3.277 7.981 Atomic orbital electron populations 1.86500 1.16973 1.81790 1.49649 1.24956 0.85242 1.11081 0.95276 0.94010 0.81148 0.75898 0.86878 1.21154 1.04707 0.84259 0.99506 1.20720 1.06125 1.00221 0.95274 1.21353 1.00699 0.90094 1.00168 1.20458 1.09938 0.95877 0.90314 1.17093 0.78322 0.82108 0.84540 1.90883 1.43444 1.84410 1.20913 1.45843 1.57936 1.09072 1.24474 1.22514 0.96216 0.80050 0.99166 0.86040 1.23377 0.96865 0.94008 1.03168 1.22655 0.98645 0.93999 0.98848 0.87693 1.22173 0.91213 0.85469 1.00617 1.47529 1.07263 1.07241 1.46522 1.23747 1.02732 0.83776 1.10136 1.23695 0.88684 1.01493 1.06941 1.75179 1.27273 0.95023 1.16362 1.78360 0.89727 1.19132 1.18648 1.23527 0.98499 0.93714 1.02036 1.41933 1.43115 1.09342 1.17638 0.76822 0.86850 1.17676 1.17826 0.83061 0.82895 0.77169 0.89018 0.89612 0.87210 0.88113 0.79254 0.79288 0.89842 0.89354 0.74721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.03 12.88 -35.23 -0.45 0.57 16 2 C -0.06 0.12 3.08 36.00 0.11 0.23 16 3 Si 0.72 -1.83 30.56 -169.99 -5.19 -7.03 16 4 C 0.02 -0.02 6.46 -81.96 -0.53 -0.55 16 5 C -0.20 0.09 9.32 -39.98 -0.37 -0.28 16 6 C -0.10 -0.13 10.65 -39.12 -0.42 -0.55 16 7 C -0.05 -0.05 7.06 -81.98 -0.58 -0.63 16 8 C 0.59 1.23 7.79 -12.85 -0.10 1.13 16 9 O -0.52 -3.17 16.48 5.19 0.09 -3.09 16 10 N -0.72 1.08 5.35 -54.32 -0.29 0.79 16 11 C 0.13 -0.20 4.24 -67.12 -0.28 -0.49 16 12 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 13 C -0.14 0.62 7.39 -25.92 -0.19 0.43 16 14 C -0.12 0.39 3.76 -89.81 -0.34 0.05 16 15 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 16 C 0.13 -0.48 6.29 -4.04 -0.03 -0.51 16 17 N -0.29 -0.03 3.44 -61.26 -0.21 -0.24 16 18 C -0.05 0.05 11.57 -17.05 -0.20 -0.14 16 19 C -0.05 -0.06 12.05 -17.74 -0.21 -0.28 16 20 N -0.27 -1.39 12.41 30.23 0.38 -1.01 16 21 N -0.08 -0.31 12.93 60.35 0.78 0.47 16 22 C -0.14 0.19 7.43 -25.92 -0.19 -0.01 16 23 N -0.52 0.74 5.99 -5.70 -0.03 0.70 16 24 H 0.38 -2.05 8.70 45.56 0.40 -1.65 16 25 H 0.11 -0.23 7.96 -51.93 -0.41 -0.64 16 26 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 27 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 28 H 0.15 -0.39 6.19 -52.48 -0.32 -0.71 16 29 H 0.15 0.18 8.06 -52.49 -0.42 -0.24 16 30 H 0.39 -1.72 7.86 -40.82 -0.32 -2.04 16 31 H 0.09 -0.57 8.08 -51.93 -0.42 -0.99 16 32 H 0.09 -0.40 8.14 -51.93 -0.42 -0.83 16 33 H 0.11 -0.72 8.07 -51.93 -0.42 -1.14 16 34 H 0.10 -0.46 7.84 -51.93 -0.41 -0.87 16 35 H 0.19 -0.96 8.06 -52.49 -0.42 -1.39 16 36 H 0.19 -0.32 8.06 -52.49 -0.42 -0.74 16 37 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 38 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 39 H 0.42 -1.60 8.19 -40.82 -0.33 -1.94 16 LS Contribution 338.20 15.07 5.10 5.10 Total: 0.00 -11.82 338.20 -7.95 -19.77 By element: Atomic # 1 Polarization: -9.67 SS G_CDS: -4.77 Total: -14.44 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -3.33 Total: -1.60 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: 0.62 Total: 0.71 kcal Atomic # 8 Polarization: -2.15 SS G_CDS: -0.37 Total: -2.51 kcal Atomic # 14 Polarization: -1.83 SS G_CDS: -5.19 Total: -7.03 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -11.82 -7.95 -19.77 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_6580494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.227 kcal (2) G-P(sol) polarization free energy of solvation -11.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.950 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.772 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds