Wall clock time and date at job start Tue Mar 9 2021 12:52:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37932 * 120.07548 * 2 1 4 4 C 1.38380 * 120.14959 * 179.71873 * 3 2 1 5 5 C 1.50699 * 119.86005 * 180.27783 * 4 3 2 6 6 C 1.38339 * 120.28546 * 0.51893 * 4 3 2 7 7 C 1.50701 * 119.92506 * 179.76347 * 6 4 3 8 8 O 1.42901 * 109.47049 * 284.72359 * 7 6 4 9 9 Si 1.86297 * 109.47391 * 164.72093 * 7 6 4 10 10 C 1.37980 * 120.14826 * 359.48272 * 6 4 3 11 11 C 1.39549 * 119.85179 * 0.25691 * 10 6 4 12 12 C 1.47845 * 120.14666 * 180.02562 * 11 10 6 13 13 O 1.21555 * 120.00261 * 173.75054 * 12 11 10 14 14 N 1.34781 * 119.99840 * 353.74251 * 12 11 10 15 15 C 1.46497 * 119.99973 * 180.02562 * 14 12 11 16 16 H 1.08988 * 112.85014 * 23.80519 * 15 14 12 17 17 C 1.53780 * 113.61152 * 155.00553 * 15 14 12 18 18 C 1.53781 * 87.08176 * 139.97724 * 17 15 14 19 19 H 1.09011 * 113.61384 * 89.19532 * 18 17 15 20 20 C 1.52997 * 113.61655 * 220.01681 * 18 17 15 21 21 N 1.46507 * 109.47251 * 185.00138 * 20 18 17 22 22 C 1.35306 * 125.86830 * 124.99802 * 21 20 18 23 23 C 1.35348 * 106.17503 * 180.02562 * 22 21 20 24 24 N 1.33772 * 106.49824 * 359.97438 * 23 22 21 25 25 N 1.28641 * 108.88018 * 359.73657 * 24 23 22 26 26 C 1.53781 * 87.08058 * 334.56484 * 18 17 15 27 27 H 1.08997 * 109.47486 * 263.43219 * 1 2 3 28 28 H 1.09003 * 109.47307 * 23.43548 * 1 2 3 29 29 H 1.09003 * 109.47079 * 143.42812 * 1 2 3 30 30 H 1.08007 * 119.92638 * 359.97438 * 3 2 1 31 31 H 1.08998 * 109.47169 * 270.23870 * 5 4 3 32 32 H 1.09002 * 109.46679 * 30.23509 * 5 4 3 33 33 H 1.08997 * 109.47576 * 150.23752 * 5 4 3 34 34 H 1.09004 * 109.47303 * 44.71881 * 7 6 4 35 35 H 0.96701 * 113.99524 * 299.99490 * 8 7 6 36 36 H 1.48502 * 109.99827 * 58.68036 * 9 7 6 37 37 H 1.48502 * 110.00526 * 179.97438 * 9 7 6 38 38 H 1.08002 * 120.06963 * 180.27914 * 10 6 4 39 39 H 0.97005 * 119.99731 * 0.02562 * 14 12 11 40 40 H 1.09002 * 113.61152 * 254.52735 * 17 15 14 41 41 H 1.09000 * 113.61640 * 25.43015 * 17 15 14 42 42 H 1.08998 * 109.47134 * 304.99740 * 20 18 17 43 43 H 1.08993 * 109.47456 * 64.99978 * 20 18 17 44 44 H 1.08006 * 126.91688 * 359.97438 * 22 21 20 45 45 H 1.08002 * 126.75561 * 179.97438 * 23 22 21 46 46 H 1.08997 * 113.61259 * 270.88180 * 26 18 17 47 47 H 1.09003 * 113.61307 * 139.97893 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5820 1.1954 0.0059 5 6 4.3306 2.5033 0.0122 6 6 4.2812 0.0018 0.0010 7 6 5.7882 0.0132 0.0020 8 8 6.2628 0.3651 -1.2991 9 14 6.4218 -1.6784 0.4577 10 6 3.6020 -1.1993 0.0009 11 6 2.2065 -1.2081 0.0004 12 6 1.4721 -2.4912 0.0010 13 8 0.2620 -2.4989 0.1152 14 7 2.1444 -3.6525 -0.1253 15 6 1.4167 -4.9240 -0.1253 16 1 0.3756 -4.8157 -0.4289 17 6 2.1567 -6.0572 -0.8553 18 6 1.6781 -6.9889 0.2706 19 1 0.7084 -7.4472 0.0756 20 6 2.7342 -8.0009 0.7193 21 7 2.1483 -8.9142 1.7037 22 6 2.1314 -10.2646 1.6206 23 6 1.4964 -10.7029 2.7327 24 7 1.1609 -9.6135 3.4328 25 7 1.5665 -8.5701 2.7990 26 6 1.6025 -5.7400 1.1648 27 1 -0.3634 -0.1175 1.0209 28 1 -0.3634 0.9429 -0.4087 29 1 -0.3633 -0.8253 -0.6123 30 1 1.6582 2.1290 -0.0004 31 1 4.5117 2.8232 -1.0139 32 1 3.7382 3.2584 0.5290 33 1 5.2831 2.3743 0.5260 34 1 6.1455 0.7429 0.7287 35 1 5.9826 -0.2422 -1.9975 36 1 5.9156 -2.6872 -0.5073 37 1 7.9068 -1.6806 0.4617 38 1 4.1492 -2.1304 0.0016 39 1 3.1102 -3.6464 -0.2161 40 1 1.7335 -6.2977 -1.8306 41 1 3.2384 -5.9256 -0.8830 42 1 3.0813 -8.5702 -0.1429 43 1 3.5753 -7.4732 1.1688 44 1 2.5412 -10.8709 0.8263 45 1 1.2994 -11.7300 3.0020 46 1 2.5326 -5.5218 1.6895 47 1 0.7318 -5.7245 1.8205 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_9599494.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:27 Heat of formation + Delta-G solvation = 89.825437 kcal Electronic energy + Delta-G solvation = -29474.851220 eV Core-core repulsion = 25434.522520 eV Total energy + Delta-G solvation = -4040.328700 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.168 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -44.14526 -41.79039 -40.74457 -39.43914 -37.76524 -35.90982 -34.65860 -34.41663 -33.09656 -31.92650 -29.92470 -29.16294 -28.48389 -26.95259 -25.75322 -24.85013 -23.71963 -23.53196 -22.72560 -21.79702 -21.44950 -20.66906 -19.10651 -18.73450 -17.70192 -17.59248 -17.21440 -16.84673 -16.42177 -16.34466 -16.27260 -16.08147 -15.84377 -15.69500 -15.41383 -15.00763 -14.68758 -14.62508 -14.39808 -14.09789 -13.97269 -13.86073 -13.69863 -13.49769 -13.21820 -13.13248 -12.84933 -12.73600 -12.59922 -12.54504 -12.39644 -12.13409 -11.97660 -11.88123 -11.83504 -11.55252 -11.03457 -10.68379 -10.58554 -10.30217 -10.14813 -9.92266 -9.61603 -5.12151 -0.23449 0.14621 0.66863 1.11443 1.32967 1.35989 1.71005 1.76045 1.81240 2.04027 2.64855 3.04371 3.18925 3.25762 3.34740 3.44129 3.46254 3.54866 3.62018 3.64148 3.79067 3.81466 3.86966 3.98410 4.11091 4.13855 4.14437 4.31795 4.39784 4.42783 4.48658 4.49794 4.50889 4.54165 4.68877 4.69731 4.70543 4.78349 4.86666 4.92366 4.98274 5.02772 5.04799 5.06644 5.24832 5.27753 5.43984 5.47123 5.56140 5.61077 5.79722 6.28101 6.38952 7.16563 7.61863 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.007 4.007 3 C -0.132 4.132 4 C -0.023 4.023 5 C -0.121 4.121 6 C -0.135 4.135 7 C -0.072 4.072 8 O -0.525 6.525 9 Si 0.683 3.317 10 C -0.080 4.080 11 C -0.146 4.146 12 C 0.562 3.438 13 O -0.524 6.524 14 N -0.719 5.719 15 C 0.125 3.875 16 H 0.120 0.880 17 C -0.137 4.137 18 C -0.122 4.122 19 H 0.104 0.896 20 C 0.126 3.874 21 N -0.291 5.291 22 C -0.054 4.054 23 C -0.051 4.051 24 N -0.273 5.273 25 N -0.078 5.078 26 C -0.138 4.138 27 H 0.079 0.921 28 H 0.060 0.940 29 H 0.096 0.904 30 H 0.133 0.867 31 H 0.079 0.921 32 H 0.069 0.931 33 H 0.074 0.926 34 H 0.120 0.880 35 H 0.375 0.625 36 H -0.259 1.259 37 H -0.254 1.254 38 H 0.127 0.873 39 H 0.398 0.602 40 H 0.084 0.916 41 H 0.092 0.908 42 H 0.109 0.891 43 H 0.102 0.898 44 H 0.190 0.810 45 H 0.190 0.810 46 H 0.090 0.910 47 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.302 -1.357 -3.565 5.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.008 4.008 3 C -0.150 4.150 4 C -0.024 4.024 5 C -0.178 4.178 6 C -0.135 4.135 7 C -0.182 4.182 8 O -0.331 6.331 9 Si 0.584 3.416 10 C -0.098 4.098 11 C -0.149 4.149 12 C 0.351 3.649 13 O -0.402 6.402 14 N -0.371 5.371 15 C 0.020 3.980 16 H 0.138 0.862 17 C -0.176 4.176 18 C -0.142 4.142 19 H 0.122 0.878 20 C 0.005 3.995 21 N -0.085 5.085 22 C -0.204 4.204 23 C -0.208 4.208 24 N -0.139 5.139 25 N -0.058 5.058 26 C -0.177 4.177 27 H 0.098 0.902 28 H 0.079 0.921 29 H 0.114 0.886 30 H 0.151 0.849 31 H 0.098 0.902 32 H 0.088 0.912 33 H 0.092 0.908 34 H 0.138 0.862 35 H 0.223 0.777 36 H -0.185 1.185 37 H -0.178 1.178 38 H 0.144 0.856 39 H 0.234 0.766 40 H 0.103 0.897 41 H 0.110 0.890 42 H 0.127 0.873 43 H 0.120 0.880 44 H 0.207 0.793 45 H 0.207 0.793 46 H 0.109 0.891 47 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 3.747 -0.376 -2.518 4.530 hybrid contribution 0.825 -0.852 -2.045 2.364 sum 4.571 -1.229 -4.563 6.575 Atomic orbital electron populations 1.21131 0.89649 1.03299 1.03966 1.20111 0.97041 0.91282 0.92415 1.21046 0.93375 0.97889 1.02670 1.20002 0.93423 0.95165 0.93787 1.20928 1.00230 0.93361 1.03245 1.19963 0.95988 0.92761 1.04834 1.24971 0.91755 1.13016 0.88481 1.86624 1.76105 1.54139 1.16277 0.95014 0.81326 0.75040 0.90209 1.21163 0.93296 0.97546 0.97796 1.19609 0.93004 0.93235 1.09084 1.18274 0.87132 0.83599 0.75933 1.90758 1.13605 1.87011 1.48801 1.45902 1.10539 1.05607 1.75022 1.22493 0.98042 0.80799 0.96697 0.86186 1.23387 1.01348 0.94528 0.98296 1.22653 0.99291 0.94190 0.98026 0.87786 1.22185 0.96315 0.91208 0.89826 1.47528 1.38044 1.06394 1.16537 1.23738 1.08205 0.84497 1.03987 1.23687 1.03115 1.00313 0.93723 1.75182 1.18420 0.95785 1.24480 1.78354 1.11393 1.21812 0.94226 1.23529 1.04054 0.93193 0.96937 0.90237 0.92133 0.88600 0.84910 0.90208 0.91175 0.90767 0.86193 0.77743 1.18467 1.17820 0.85612 0.76640 0.89739 0.89000 0.87279 0.88002 0.79299 0.79331 0.89138 0.89882 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.19 8.73 36.00 0.31 0.12 16 2 C -0.01 -0.01 5.91 -104.23 -0.62 -0.63 16 3 C -0.13 -0.05 9.31 -39.64 -0.37 -0.42 16 4 C -0.02 0.00 5.89 -104.53 -0.62 -0.61 16 5 C -0.12 0.15 9.54 36.00 0.34 0.49 16 6 C -0.14 0.09 5.26 -104.68 -0.55 -0.46 16 7 C -0.07 0.11 2.04 36.01 0.07 0.18 16 8 O -0.53 0.14 12.81 -35.23 -0.45 -0.31 16 9 Si 0.68 -1.68 30.24 -169.99 -5.14 -6.82 16 10 C -0.08 0.07 8.13 -39.19 -0.32 -0.25 16 11 C -0.15 -0.15 5.87 -104.97 -0.62 -0.77 16 12 C 0.56 0.99 7.70 -12.33 -0.09 0.90 16 13 O -0.52 -2.51 12.95 5.32 0.07 -2.44 16 14 N -0.72 0.88 5.30 -53.96 -0.29 0.59 16 15 C 0.12 -0.21 4.24 -67.12 -0.28 -0.49 16 16 H 0.12 0.02 7.46 -51.94 -0.39 -0.37 16 17 C -0.14 0.60 7.39 -25.92 -0.19 0.41 16 18 C -0.12 0.39 3.77 -89.81 -0.34 0.06 16 19 H 0.10 -0.21 8.14 -51.92 -0.42 -0.63 16 20 C 0.13 -0.49 6.29 -4.04 -0.03 -0.51 16 21 N -0.29 0.02 3.44 -61.26 -0.21 -0.19 16 22 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 23 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 24 N -0.27 -1.33 12.41 30.23 0.38 -0.95 16 25 N -0.08 -0.29 12.94 60.35 0.78 0.49 16 26 C -0.14 0.22 7.43 -25.92 -0.19 0.02 16 27 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 28 H 0.06 0.01 8.04 -51.93 -0.42 -0.41 16 29 H 0.10 0.30 5.86 -51.93 -0.30 0.00 16 30 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 31 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 33 H 0.07 -0.11 6.21 -51.93 -0.32 -0.43 16 34 H 0.12 -0.25 6.47 -51.93 -0.34 -0.58 16 35 H 0.38 -1.11 8.70 45.56 0.40 -0.72 16 36 H -0.26 0.51 6.68 56.52 0.38 0.89 16 37 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 38 H 0.13 -0.38 3.25 -52.49 -0.17 -0.55 16 39 H 0.40 -1.38 6.80 -40.82 -0.28 -1.66 16 40 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 41 H 0.09 -0.54 8.08 -51.93 -0.42 -0.96 16 42 H 0.11 -0.71 8.07 -51.93 -0.42 -1.13 16 43 H 0.10 -0.48 7.84 -51.93 -0.41 -0.89 16 44 H 0.19 -0.97 8.06 -52.48 -0.42 -1.39 16 45 H 0.19 -0.34 8.06 -52.49 -0.42 -0.76 16 46 H 0.09 -0.19 7.90 -51.93 -0.41 -0.60 16 47 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 LS Contribution 382.64 15.07 5.77 5.77 Total: 0.00 -9.85 382.64 -9.49 -19.34 By element: Atomic # 1 Polarization: -6.61 SS G_CDS: -6.50 Total: -13.10 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -3.89 Total: -2.37 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: 0.66 Total: -0.07 kcal Atomic # 8 Polarization: -2.36 SS G_CDS: -0.38 Total: -2.75 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.14 Total: -6.82 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.85 -9.49 -19.34 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_9599494.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.164 kcal (2) G-P(sol) polarization free energy of solvation -9.850 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.315 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.339 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.825 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds