Wall clock time and date at job start Tue Mar 9 2021 12:52:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46971 * 2 1 4 4 C 1.50698 * 109.47012 * 239.99996 * 2 1 3 5 5 C 1.34235 * 126.50224 * 105.35590 * 4 2 1 6 6 N 1.36838 * 109.93918 * 180.13135 * 5 4 2 7 7 C 1.46492 * 125.06423 * 179.81586 * 6 5 4 8 8 C 1.50706 * 109.47193 * 264.69958 * 7 6 5 9 9 O 1.21281 * 119.99922 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99749 * 179.97438 * 8 7 6 11 11 C 1.46494 * 119.99525 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.91148 * 23.75262 * 11 10 8 13 13 C 1.53786 * 113.61370 * 155.00031 * 11 10 8 14 14 C 1.53781 * 87.17350 * 140.02367 * 13 11 10 15 15 H 1.08999 * 113.61567 * 89.07405 * 14 13 11 16 16 C 1.52991 * 113.61529 * 219.97788 * 14 13 11 17 17 N 1.46508 * 109.47429 * 184.99923 * 16 14 13 18 18 C 1.35305 * 125.86550 * 124.71309 * 17 16 14 19 19 C 1.35348 * 106.17263 * 179.90742 * 18 17 16 20 20 N 1.33771 * 106.49864 * 0.35374 * 19 18 17 21 21 N 1.28635 * 108.88237 * 359.77438 * 20 19 18 22 22 C 1.53781 * 87.08070 * 334.52830 * 14 13 11 23 23 C 1.37692 * 109.87203 * 359.55222 * 6 5 4 24 24 C 1.39087 * 133.51445 * 180.27769 * 23 6 5 25 25 C 1.37789 * 119.78046 * 179.97438 * 24 23 6 26 26 C 1.38788 * 120.66586 * 0.03335 * 25 24 23 27 27 C 1.36665 * 120.52786 * 359.94908 * 26 25 24 28 28 C 1.39593 * 119.76384 * 0.04613 * 27 26 25 29 29 H 0.96697 * 114.00363 * 300.00261 * 1 2 3 30 30 H 1.08995 * 109.47098 * 119.99772 * 2 1 3 31 31 H 1.48504 * 109.99849 * 299.99724 * 3 2 1 32 32 H 1.48493 * 110.00099 * 61.31984 * 3 2 1 33 33 H 1.07995 * 125.03356 * 359.97111 * 5 4 2 34 34 H 1.09001 * 109.47376 * 144.70113 * 7 6 5 35 35 H 1.09005 * 109.47196 * 24.69900 * 7 6 5 36 36 H 0.97000 * 119.99938 * 359.97438 * 10 8 7 37 37 H 1.09002 * 113.61357 * 25.43283 * 13 11 10 38 38 H 1.09002 * 113.61608 * 254.61445 * 13 11 10 39 39 H 1.08997 * 109.47550 * 304.99814 * 16 14 13 40 40 H 1.09002 * 109.47334 * 65.00084 * 16 14 13 41 41 H 1.08002 * 126.91630 * 0.02562 * 18 17 16 42 42 H 1.08001 * 126.75416 * 180.12537 * 19 18 17 43 43 H 1.09005 * 113.61471 * 139.98321 * 22 14 13 44 44 H 1.08996 * 113.61178 * 270.79663 * 22 14 13 45 45 H 1.08001 * 120.11060 * 0.02562 * 24 23 6 46 46 H 1.07994 * 119.66712 * 180.02562 * 25 24 23 47 47 H 1.07997 * 119.73982 * 179.97438 * 26 25 24 48 48 H 1.08002 * 120.11624 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.4669 -0.1381 -2.3202 6 7 2.8040 -1.0992 -3.2341 7 6 3.4095 -0.8407 -4.5427 8 6 2.3304 -0.7841 -5.5932 9 8 1.1699 -0.9445 -5.2797 10 7 2.6552 -0.5553 -6.8811 11 6 1.6063 -0.5009 -7.9024 12 1 0.6283 -0.2477 -7.4931 13 6 1.9914 0.3308 -9.1372 14 6 1.2977 -0.7480 -9.9857 15 1 0.2355 -0.5622 -10.1449 16 6 2.0437 -1.0846 -11.2783 17 7 1.2492 -2.0278 -12.0693 18 6 0.8555 -1.8521 -13.3518 19 6 0.1511 -2.9588 -13.6850 20 7 0.1417 -3.7436 -12.6017 21 7 0.8009 -3.1634 -11.6617 22 6 1.5861 -1.7267 -8.8352 23 6 2.4946 -2.3458 -2.7380 24 6 2.6301 -3.6364 -3.2386 25 6 2.2162 -4.7109 -2.4818 26 6 1.6637 -4.5194 -1.2231 27 6 1.5217 -3.2600 -0.7117 28 6 1.9344 -2.1570 -1.4612 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5615 2.4679 -1.2086 32 1 1.5879 2.4585 1.2242 33 1 2.6082 0.9238 -2.4567 34 1 4.1095 -1.6407 -4.7836 35 1 3.9406 0.1109 -4.5157 36 1 3.5834 -0.4267 -7.1318 37 1 3.0668 0.3928 -9.3039 38 1 1.4997 1.3027 -9.1797 39 1 2.2037 -0.1728 -11.8536 40 1 3.0063 -1.5347 -11.0356 41 1 1.0633 -1.0010 -13.9833 42 1 -0.3151 -3.1658 -14.6369 43 1 0.7666 -2.4163 -8.6327 44 1 2.5501 -2.2283 -8.9200 45 1 3.0590 -3.7958 -4.2169 46 1 2.3225 -5.7122 -2.8722 47 1 1.3439 -5.3723 -0.6430 48 1 1.0913 -3.1187 0.2688 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:29 Heat of formation + Delta-G solvation = 134.900357 kcal Electronic energy + Delta-G solvation = -32093.547278 eV Core-core repulsion = 27733.294982 eV Total energy + Delta-G solvation = -4360.252296 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -44.17224 -42.54525 -41.17884 -39.63208 -38.10809 -37.72530 -35.82485 -34.52423 -34.01761 -31.94763 -31.49277 -30.30806 -29.79733 -28.74547 -26.77226 -25.94159 -24.62828 -23.74501 -23.52721 -22.80720 -22.19457 -21.68144 -20.82353 -20.52773 -18.74107 -18.55144 -18.40383 -18.15975 -17.71396 -17.40276 -16.82437 -16.45585 -16.37461 -16.24027 -15.86307 -15.79381 -15.58600 -15.30983 -14.97366 -14.86822 -14.76720 -14.46710 -14.36229 -14.13178 -13.77815 -13.54652 -13.49554 -13.38158 -13.09637 -12.74370 -12.64417 -12.59049 -12.53893 -12.33341 -12.11110 -12.02696 -11.94590 -11.73476 -11.46054 -11.15102 -11.01023 -10.55902 -10.35723 -10.33008 -10.14249 -9.17622 -8.64731 -4.91519 0.11970 0.61951 0.68640 1.30828 1.37894 1.41468 1.52322 1.61275 1.62331 1.71923 1.97225 2.19741 2.91623 3.27347 3.39672 3.50716 3.54778 3.60196 3.62375 3.70671 3.74067 3.79072 3.84054 3.99192 4.01281 4.13367 4.13902 4.21091 4.23750 4.26480 4.32912 4.34578 4.39437 4.55148 4.63761 4.66776 4.69513 4.75890 4.77568 4.82690 4.88492 4.92412 5.01547 5.12301 5.12633 5.26898 5.48653 5.49316 5.64082 5.71233 5.72329 5.73822 6.16707 6.22132 6.47379 6.66795 7.14320 7.54282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.060 4.060 3 Si 0.785 3.215 4 C -0.183 4.183 5 C 0.074 3.926 6 N -0.467 5.467 7 C 0.088 3.912 8 C 0.487 3.513 9 O -0.579 6.579 10 N -0.697 5.697 11 C 0.115 3.885 12 H 0.080 0.920 13 C -0.106 4.106 14 C -0.117 4.117 15 H 0.081 0.919 16 C 0.119 3.881 17 N -0.287 5.287 18 C -0.034 4.034 19 C -0.075 4.075 20 N -0.326 5.326 21 N -0.122 5.122 22 C -0.141 4.141 23 C 0.090 3.910 24 C -0.134 4.134 25 C -0.108 4.108 26 C -0.153 4.153 27 C -0.087 4.087 28 C -0.118 4.118 29 H 0.389 0.611 30 H 0.079 0.921 31 H -0.290 1.290 32 H -0.286 1.286 33 H 0.195 0.805 34 H 0.147 0.853 35 H 0.169 0.831 36 H 0.425 0.575 37 H 0.130 0.870 38 H 0.090 0.910 39 H 0.151 0.849 40 H 0.118 0.882 41 H 0.237 0.763 42 H 0.209 0.791 43 H 0.037 0.963 44 H 0.102 0.898 45 H 0.132 0.868 46 H 0.145 0.855 47 H 0.138 0.862 48 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.901 8.675 -4.886 15.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.167 4.167 3 Si 0.688 3.312 4 C -0.190 4.190 5 C -0.051 4.051 6 N -0.149 5.149 7 C -0.036 4.036 8 C 0.273 3.727 9 O -0.458 6.458 10 N -0.350 5.350 11 C 0.009 3.991 12 H 0.098 0.902 13 C -0.144 4.144 14 C -0.137 4.137 15 H 0.099 0.901 16 C 0.000 4.000 17 N -0.081 5.081 18 C -0.186 4.186 19 C -0.233 4.233 20 N -0.191 5.191 21 N -0.101 5.101 22 C -0.179 4.179 23 C -0.015 4.015 24 C -0.155 4.155 25 C -0.127 4.127 26 C -0.172 4.172 27 C -0.106 4.106 28 C -0.122 4.122 29 H 0.239 0.761 30 H 0.097 0.903 31 H -0.217 1.217 32 H -0.213 1.213 33 H 0.212 0.788 34 H 0.165 0.835 35 H 0.186 0.814 36 H 0.264 0.736 37 H 0.148 0.852 38 H 0.109 0.891 39 H 0.169 0.831 40 H 0.136 0.864 41 H 0.253 0.747 42 H 0.225 0.775 43 H 0.056 0.944 44 H 0.121 0.879 45 H 0.150 0.850 46 H 0.163 0.837 47 H 0.156 0.844 48 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 11.063 8.172 -4.293 14.408 hybrid contribution -1.625 0.121 -0.357 1.668 sum 9.438 8.293 -4.650 13.397 Atomic orbital electron populations 1.86627 1.19691 1.80663 1.50543 1.24516 0.83086 1.12227 0.96909 0.94240 0.89553 0.70504 0.76865 1.19768 1.09644 0.91430 0.98126 1.21932 1.00051 0.94935 0.88194 1.43405 1.53479 1.03748 1.14284 1.22042 0.93640 1.09476 0.78486 1.21628 0.90440 0.75742 0.84863 1.90823 1.22831 1.50193 1.81951 1.45727 1.11617 1.72001 1.05665 1.22440 0.92237 0.97582 0.86819 0.90208 1.23277 1.03531 0.97167 0.90415 1.22515 1.00259 0.98305 0.92597 0.90064 1.22604 0.93469 0.92106 0.91809 1.47897 1.35013 1.14327 1.10871 1.24436 1.02760 1.04104 0.87282 1.24237 1.05194 0.93260 1.00561 1.75097 1.16685 1.27295 1.00056 1.78271 1.13503 0.95944 1.22398 1.23556 1.02508 0.96646 0.95239 1.18406 1.01876 0.87037 0.94168 1.20243 1.05138 0.89117 1.00973 1.21141 0.98214 0.99001 0.94392 1.20927 1.02265 0.97079 0.96971 1.20455 0.98880 0.91573 0.99650 1.19382 1.03844 0.93817 0.95187 0.76117 0.90312 1.21725 1.21251 0.78807 0.83493 0.81381 0.73648 0.85194 0.89146 0.83137 0.86421 0.74668 0.77457 0.94366 0.87938 0.84994 0.83714 0.84381 0.86027 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -5.18 12.86 -148.98 -1.92 -7.09 16 2 C -0.06 -0.29 3.05 71.24 0.22 -0.08 16 3 Si 0.79 -0.60 30.78 68.60 2.11 1.51 16 4 C -0.18 -1.62 5.61 -18.63 -0.10 -1.73 16 5 C 0.07 0.33 9.89 83.00 0.82 1.16 16 6 N -0.47 -1.88 2.27 -519.99 -1.18 -3.06 16 7 C 0.09 -0.54 6.48 85.64 0.56 0.02 16 8 C 0.49 0.38 7.90 87.66 0.69 1.07 16 9 O -0.58 -8.52 16.02 -3.03 -0.05 -8.57 16 10 N -0.70 4.96 5.36 -439.60 -2.36 2.61 16 11 C 0.11 -0.42 4.25 45.61 0.19 -0.23 16 12 H 0.08 0.35 7.47 -2.39 -0.02 0.34 16 13 C -0.11 1.29 7.39 31.12 0.23 1.52 16 14 C -0.12 0.84 3.76 -10.27 -0.04 0.80 16 15 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 16 C 0.12 -1.26 6.29 86.37 0.54 -0.71 16 17 N -0.29 0.24 3.44 -347.74 -1.20 -0.96 16 18 C -0.03 0.13 11.57 83.49 0.97 1.10 16 19 C -0.07 -0.20 12.05 83.73 1.01 0.81 16 20 N -0.33 -3.91 12.41 -58.26 -0.72 -4.63 16 21 N -0.12 -1.13 12.93 37.02 0.48 -0.65 16 22 C -0.14 0.31 7.44 31.21 0.23 0.54 16 23 C 0.09 0.87 6.80 39.03 0.27 1.14 16 24 C -0.13 -1.00 10.00 22.37 0.22 -0.78 16 25 C -0.11 -0.75 10.01 22.30 0.22 -0.52 16 26 C -0.15 -1.26 9.97 22.03 0.22 -1.04 16 27 C -0.09 -0.96 10.05 22.23 0.22 -0.74 16 28 C -0.12 -1.46 6.35 -20.20 -0.13 -1.59 16 29 H 0.39 0.01 8.74 -74.06 -0.65 -0.64 16 30 H 0.08 0.17 7.96 -2.39 -0.02 0.15 16 31 H -0.29 -1.40 7.05 99.48 0.70 -0.70 16 32 H -0.29 -0.91 7.11 99.48 0.71 -0.21 16 33 H 0.20 -0.43 6.30 -2.91 -0.02 -0.45 16 34 H 0.15 -1.73 8.14 -2.39 -0.02 -1.75 16 35 H 0.17 -2.58 8.12 -2.38 -0.02 -2.60 16 36 H 0.42 -6.90 8.73 -92.71 -0.81 -7.71 16 37 H 0.13 -2.46 8.08 -2.39 -0.02 -2.48 16 38 H 0.09 -1.11 8.14 -2.39 -0.02 -1.13 16 39 H 0.15 -2.78 8.07 -2.39 -0.02 -2.79 16 40 H 0.12 -1.55 7.84 -2.39 -0.02 -1.57 16 41 H 0.24 -3.41 8.06 -2.91 -0.02 -3.43 16 42 H 0.21 -0.69 8.06 -2.91 -0.02 -0.71 16 43 H 0.04 0.25 8.14 -2.38 -0.02 0.23 16 44 H 0.10 -0.52 7.89 -2.39 -0.02 -0.54 16 45 H 0.13 0.35 8.06 -2.91 -0.02 0.33 16 46 H 0.15 0.26 8.06 -2.91 -0.02 0.23 16 47 H 0.14 0.50 8.06 -2.91 -0.02 0.48 16 48 H 0.12 1.09 8.06 -2.91 -0.02 1.07 16 Total: 0.00 -45.31 409.20 1.10 -44.21 By element: Atomic # 1 Polarization: -23.69 SS G_CDS: -0.42 Total: -24.10 kcal Atomic # 6 Polarization: -5.60 SS G_CDS: 6.34 Total: 0.74 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -4.98 Total: -6.70 kcal Atomic # 8 Polarization: -13.69 SS G_CDS: -1.96 Total: -15.66 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: 2.11 Total: 1.51 kcal Total: -45.31 1.10 -44.21 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.112 kcal (2) G-P(sol) polarization free energy of solvation -45.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.802 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.098 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.212 kcal (6) G-S(sol) free energy of system = (1) + (5) 134.900 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds