Wall clock time and date at job start Tue Mar 9 2021 12:54:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52998 * 109.46989 * 2 1 4 4 C 1.53002 * 109.46943 * 240.00160 * 2 1 3 5 5 O 1.45196 * 109.47120 * 119.99853 * 2 1 3 6 6 C 1.34644 * 116.99750 * 60.00078 * 5 2 1 7 7 O 1.21507 * 119.99930 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99827 * 179.97438 * 6 5 2 9 9 C 1.46496 * 120.00258 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.84698 * 23.81010 * 9 8 6 11 11 C 1.53781 * 113.61479 * 155.00061 * 9 8 6 12 12 C 1.53785 * 87.08021 * 139.98553 * 11 9 8 13 13 H 1.09003 * 113.61637 * 220.02206 * 12 11 9 14 14 C 1.50702 * 113.61637 * 89.11277 * 12 11 9 15 15 O 1.21279 * 119.99864 * 0.02562 * 14 12 11 16 16 N 1.34779 * 119.99999 * 179.97438 * 14 12 11 17 17 N 1.40100 * 119.99561 * 180.02562 * 16 14 12 18 18 C 1.34780 * 119.99805 * 180.02562 * 17 16 14 19 19 O 1.21570 * 119.99790 * 359.97438 * 18 17 16 20 20 C 1.47722 * 120.00303 * 179.97438 * 18 17 16 21 21 C 1.39629 * 120.11945 * 179.97438 * 20 18 17 22 22 C 1.37853 * 119.87753 * 180.02562 * 21 20 18 23 23 C 1.50699 * 119.93831 * 179.97438 * 22 21 20 24 24 O 1.42900 * 109.47029 * 254.99872 * 23 22 21 25 25 Si 1.86304 * 109.47229 * 134.99938 * 23 22 21 26 26 C 1.38634 * 120.12267 * 359.97438 * 22 21 20 27 27 F 1.35095 * 119.88283 * 179.97438 * 26 22 21 28 28 C 1.38679 * 120.23766 * 0.02701 * 26 22 21 29 29 C 1.37826 * 120.11507 * 359.67029 * 28 26 22 30 30 C 1.53779 * 113.61716 * 252.50494 * 9 8 6 31 31 H 1.09004 * 109.47306 * 299.99804 * 1 2 3 32 32 H 1.09003 * 109.47378 * 60.00136 * 1 2 3 33 33 H 1.09006 * 109.47255 * 179.97438 * 1 2 3 34 34 H 1.08999 * 109.47084 * 180.02562 * 3 2 1 35 35 H 1.09003 * 109.46954 * 299.99569 * 3 2 1 36 36 H 1.08998 * 109.47592 * 60.00181 * 3 2 1 37 37 H 1.09005 * 109.46853 * 299.99576 * 4 2 1 38 38 H 1.08994 * 109.47198 * 59.99893 * 4 2 1 39 39 H 1.08999 * 109.46961 * 179.97438 * 4 2 1 40 40 H 0.96999 * 120.00047 * 0.02562 * 8 6 5 41 41 H 1.08997 * 113.61529 * 254.53080 * 11 9 8 42 42 H 1.08994 * 113.61503 * 25.43673 * 11 9 8 43 43 H 0.96998 * 119.99944 * 0.02562 * 16 14 12 44 44 H 0.96998 * 120.00494 * 359.97438 * 17 16 14 45 45 H 1.08002 * 120.05813 * 0.02562 * 21 20 18 46 46 H 1.09001 * 109.47407 * 15.00382 * 23 22 21 47 47 H 0.96697 * 114.00324 * 299.99394 * 24 23 22 48 48 H 1.48495 * 110.00006 * 179.97438 * 25 23 22 49 49 H 1.48499 * 110.00002 * 301.32056 * 25 23 22 50 50 H 1.07993 * 119.94091 * 179.97438 * 28 26 22 51 51 H 1.08003 * 120.05528 * 180.29786 * 29 28 26 52 52 H 1.09000 * 113.60898 * 334.56095 * 30 9 8 53 53 H 1.08994 * 113.62073 * 105.46736 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6844 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0680 -2.6657 2.4166 9 6 1.6739 -4.0668 2.5832 10 1 1.4209 -4.5503 1.6396 11 6 2.6474 -4.8815 3.4512 12 6 1.4101 -5.5542 4.0688 13 1 1.4902 -5.7124 5.1443 14 6 0.9588 -6.7857 3.3267 15 8 1.5623 -7.1554 2.3418 16 7 -0.1148 -7.4769 3.7581 17 7 -0.5340 -8.6221 3.0684 18 6 -1.6079 -9.3130 3.4995 19 8 -2.2126 -8.9427 4.4870 20 6 -2.0503 -10.5202 2.7720 21 6 -3.1623 -11.2381 3.2168 22 6 -3.5704 -12.3643 2.5344 23 6 -4.7700 -13.1404 3.0136 24 8 -4.3355 -14.3441 3.6495 25 14 -5.8570 -13.5631 1.5607 26 6 -2.8794 -12.7840 1.4083 27 9 -3.2833 -13.8886 0.7436 28 6 -1.7743 -12.0748 0.9623 29 6 -1.3614 -10.9439 1.6333 30 6 0.6283 -4.2854 3.6894 31 1 -0.3634 0.5138 0.8900 32 1 -0.3634 0.5138 -0.8900 33 1 -0.3634 -1.0277 -0.0005 34 1 3.1299 1.4425 -0.0005 35 1 1.6766 1.9563 -0.8901 36 1 1.6767 1.9564 0.8900 37 1 1.6766 -1.7489 -1.2492 38 1 1.6766 -0.2074 -2.1392 39 1 3.1299 -0.7208 -1.2495 40 1 2.6275 -2.2368 3.0828 41 1 3.2757 -5.5643 2.8792 42 1 3.2137 -4.2756 4.1584 43 1 -0.5973 -7.1814 4.5460 44 1 -0.0518 -8.9174 2.2803 45 1 -3.7015 -10.9117 4.0937 46 1 -5.3331 -12.5364 3.7250 47 1 -3.8269 -14.9316 3.0739 48 1 -7.0432 -14.3293 2.0199 49 1 -6.2895 -12.3208 0.8717 50 1 -1.2393 -12.4063 0.0847 51 1 -0.5036 -10.3895 1.2823 52 1 0.6426 -3.5164 4.4618 53 1 -0.3734 -4.4869 3.3098 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14937822_12496548.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:10 Heat of formation + Delta-G solvation = -135.082453 kcal Electronic energy + Delta-G solvation = -38441.042513 eV Core-core repulsion = 33003.574956 eV Total energy + Delta-G solvation = -5437.467557 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.178 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -50.40131 -42.23405 -41.78946 -41.22023 -39.90553 -39.11098 -37.80021 -37.72693 -36.60643 -35.40091 -34.20284 -33.56786 -32.61150 -31.44531 -28.40048 -28.32372 -27.37048 -26.97618 -26.78601 -25.18984 -23.80033 -23.63242 -22.73756 -22.21823 -21.29290 -20.56062 -19.37782 -19.29351 -19.00592 -18.73382 -18.22440 -17.90067 -17.63443 -17.36185 -17.22429 -17.09640 -16.90893 -16.54999 -16.48316 -16.14511 -15.79618 -15.64163 -15.53500 -15.41833 -15.35892 -15.10433 -14.63676 -14.50584 -14.45674 -14.24735 -14.10877 -13.81123 -13.53812 -13.42849 -13.38311 -13.15357 -13.13686 -12.99562 -12.93775 -12.89065 -12.63070 -12.54804 -12.50783 -12.32968 -12.02501 -11.93272 -11.74749 -11.64012 -11.42236 -11.21361 -11.11964 -10.73353 -10.21188 -10.20335 -10.04723 -9.59757 -4.92528 -0.64891 -0.06843 0.54774 1.10033 1.14964 1.17740 1.47458 1.55915 1.70800 1.85428 2.41991 2.67455 2.85954 3.12684 3.20029 3.22579 3.31390 3.35292 3.51785 3.52372 3.66250 3.70184 3.71789 3.77385 3.84822 3.91914 4.01432 4.11674 4.20747 4.41066 4.52967 4.53855 4.58020 4.66647 4.69564 4.69652 4.73645 4.75379 4.80801 4.81734 4.82891 4.85342 4.90245 4.93191 4.95983 5.01308 5.13013 5.23918 5.27449 5.34530 5.40236 5.47329 5.56257 5.58390 6.25145 6.38922 6.57202 6.60415 7.08294 7.32749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.137 4.137 4 C -0.181 4.181 5 O -0.367 6.367 6 C 0.641 3.359 7 O -0.598 6.598 8 N -0.686 5.686 9 C 0.127 3.873 10 H 0.087 0.913 11 C -0.111 4.111 12 C -0.118 4.118 13 H 0.156 0.844 14 C 0.530 3.470 15 O -0.564 6.564 16 N -0.516 5.516 17 N -0.515 5.515 18 C 0.566 3.434 19 O -0.564 6.564 20 C -0.148 4.148 21 C -0.021 4.021 22 C -0.164 4.164 23 C -0.070 4.070 24 O -0.548 6.548 25 Si 0.741 3.259 26 C 0.128 3.872 27 F -0.098 7.098 28 C -0.140 4.140 29 C -0.045 4.045 30 C -0.128 4.128 31 H 0.063 0.937 32 H 0.086 0.914 33 H 0.061 0.939 34 H 0.070 0.930 35 H 0.097 0.903 36 H 0.071 0.929 37 H 0.060 0.940 38 H 0.086 0.914 39 H 0.062 0.938 40 H 0.421 0.579 41 H 0.078 0.922 42 H 0.135 0.865 43 H 0.440 0.560 44 H 0.438 0.562 45 H 0.140 0.860 46 H 0.117 0.883 47 H 0.393 0.607 48 H -0.286 1.286 49 H -0.286 1.286 50 H 0.182 0.818 51 H 0.165 0.835 52 H 0.130 0.870 53 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.220 2.010 0.401 5.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.238 4.238 5 O -0.282 6.282 6 C 0.395 3.605 7 O -0.489 6.489 8 N -0.345 5.345 9 C 0.023 3.977 10 H 0.106 0.894 11 C -0.149 4.149 12 C -0.141 4.141 13 H 0.174 0.826 14 C 0.318 3.682 15 O -0.441 6.441 16 N -0.265 5.265 17 N -0.264 5.264 18 C 0.354 3.646 19 O -0.443 6.443 20 C -0.153 4.153 21 C -0.040 4.040 22 C -0.165 4.165 23 C -0.180 4.180 24 O -0.356 6.356 25 Si 0.646 3.354 26 C 0.109 3.891 27 F -0.076 7.076 28 C -0.158 4.158 29 C -0.064 4.064 30 C -0.167 4.167 31 H 0.082 0.918 32 H 0.104 0.896 33 H 0.080 0.920 34 H 0.089 0.911 35 H 0.116 0.884 36 H 0.090 0.910 37 H 0.079 0.921 38 H 0.105 0.895 39 H 0.081 0.919 40 H 0.259 0.741 41 H 0.097 0.903 42 H 0.153 0.847 43 H 0.284 0.716 44 H 0.283 0.717 45 H 0.158 0.842 46 H 0.134 0.866 47 H 0.243 0.757 48 H -0.213 1.213 49 H -0.213 1.213 50 H 0.199 0.801 51 H 0.183 0.817 52 H 0.148 0.852 53 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 3.793 2.145 0.034 4.358 hybrid contribution -0.139 0.216 0.500 0.563 sum 3.654 2.361 0.535 4.383 Atomic orbital electron populations 1.22470 0.94105 1.03569 1.03555 1.22343 0.94418 0.92643 0.81503 1.21887 1.02496 0.90740 1.04286 1.22477 1.01674 1.02134 0.97500 1.86312 1.71492 1.23225 1.47157 1.18484 0.78667 0.80821 0.82543 1.90911 1.42402 1.70997 1.44570 1.44697 1.54937 1.11896 1.22994 1.22711 0.97334 0.78753 0.98866 0.89447 1.23322 0.95462 0.97651 0.98469 1.22125 0.99180 0.89735 1.03069 0.82640 1.20994 0.78068 0.84525 0.84640 1.90750 1.55797 1.69835 1.27673 1.45034 1.31153 1.19853 1.30436 1.44753 1.30675 1.20537 1.30385 1.18410 0.78815 0.83178 0.84147 1.90822 1.56075 1.69783 1.27581 1.19583 0.99892 0.96697 0.99135 1.20984 0.93536 0.91649 0.97815 1.20299 1.00475 0.98922 0.96796 1.25019 0.98176 0.87728 1.07114 1.86527 1.76036 1.30557 1.42438 0.93890 0.78460 0.83056 0.80024 1.17887 0.95370 0.84882 0.90992 1.91203 1.87214 1.49996 1.79174 1.21433 0.96056 0.95425 1.02920 1.21514 0.98279 0.94986 0.91577 1.23538 0.98134 0.96046 0.98986 0.91756 0.89559 0.91999 0.91113 0.88401 0.91019 0.92055 0.89490 0.91886 0.74081 0.90309 0.84672 0.71593 0.71699 0.84192 0.86551 0.75745 1.21309 1.21252 0.80101 0.81721 0.85199 0.91291 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.63 8.37 71.98 0.60 -0.03 16 2 C 0.13 0.40 1.13 -10.79 -0.01 0.38 16 3 C -0.14 0.31 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.71 8.37 71.98 0.60 -0.11 16 5 O -0.37 -1.90 9.94 -55.54 -0.55 -2.46 16 6 C 0.64 4.35 8.06 129.79 1.05 5.39 16 7 O -0.60 -7.91 11.48 19.82 0.23 -7.68 16 8 N -0.69 0.52 5.36 -567.61 -3.04 -2.52 16 9 C 0.13 -0.15 3.89 45.52 0.18 0.03 16 10 H 0.09 0.60 7.39 -2.39 -0.02 0.58 16 11 C -0.11 0.72 7.20 31.12 0.22 0.95 16 12 C -0.12 0.89 4.34 -11.01 -0.05 0.84 16 13 H 0.16 -2.19 8.14 -2.39 -0.02 -2.21 16 14 C 0.53 -0.25 7.20 87.66 0.63 0.38 16 15 O -0.56 -3.60 15.59 -3.03 -0.05 -3.64 16 16 N -0.52 0.55 6.26 -173.53 -1.09 -0.53 16 17 N -0.52 0.03 6.21 -175.68 -1.09 -1.06 16 18 C 0.57 1.70 7.89 86.75 0.68 2.39 16 19 O -0.56 -5.28 16.18 -3.94 -0.06 -5.34 16 20 C -0.15 0.03 5.87 -20.09 -0.12 -0.08 16 21 C -0.02 -0.03 9.21 22.51 0.21 0.17 16 22 C -0.16 0.04 4.78 -19.86 -0.09 -0.05 16 23 C -0.07 -0.06 2.80 71.24 0.20 0.14 16 24 O -0.55 -0.89 12.88 -148.98 -1.92 -2.81 16 25 Si 0.74 0.69 29.57 68.60 2.03 2.72 16 26 C 0.13 -0.47 6.62 22.47 0.15 -0.33 16 27 F -0.10 0.54 13.46 44.97 0.61 1.14 16 28 C -0.14 0.98 10.01 22.28 0.22 1.20 16 29 C -0.04 0.27 9.54 22.52 0.21 0.48 16 30 C -0.13 0.80 7.46 31.12 0.23 1.03 16 31 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 32 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 33 H 0.06 0.57 5.88 -2.38 -0.01 0.56 16 34 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 36 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 37 H 0.06 0.60 5.88 -2.38 -0.01 0.59 16 38 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 39 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 40 H 0.42 -2.87 8.84 -92.71 -0.82 -3.69 16 41 H 0.08 -0.16 7.43 -2.39 -0.02 -0.18 16 42 H 0.14 -1.73 8.12 -2.39 -0.02 -1.75 16 43 H 0.44 -1.48 8.00 -213.32 -1.71 -3.19 16 44 H 0.44 -1.26 6.03 -213.32 -1.29 -2.55 16 45 H 0.14 0.42 7.58 -2.91 -0.02 0.40 16 46 H 0.12 0.15 7.77 -2.39 -0.02 0.13 16 47 H 0.39 -2.33 8.41 -74.06 -0.62 -2.96 16 48 H -0.29 -2.12 7.11 99.48 0.71 -1.41 16 49 H -0.29 -1.82 7.11 99.48 0.71 -1.11 16 50 H 0.18 -2.28 8.06 -2.91 -0.02 -2.30 16 51 H 0.17 -1.84 6.40 -2.91 -0.02 -1.86 16 52 H 0.13 -1.40 8.14 -2.39 -0.02 -1.42 16 53 H 0.07 -0.21 8.09 -2.39 -0.02 -0.23 16 Total: 0.00 -28.94 439.90 -2.76 -31.70 By element: Atomic # 1 Polarization: -19.86 SS G_CDS: -3.38 Total: -23.24 kcal Atomic # 6 Polarization: 8.18 SS G_CDS: 5.56 Total: 13.73 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -5.22 Total: -4.11 kcal Atomic # 8 Polarization: -19.59 SS G_CDS: -2.35 Total: -21.94 kcal Atomic # 9 Polarization: 0.54 SS G_CDS: 0.61 Total: 1.14 kcal Atomic # 14 Polarization: 0.69 SS G_CDS: 2.03 Total: 2.72 kcal Total: -28.94 -2.76 -31.70 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14937822_12496548.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.384 kcal (2) G-P(sol) polarization free energy of solvation -28.936 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.321 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.762 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds