Wall clock time and date at job start Tue Mar 9 2021 12:56:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53005 * 109.47103 * 2 1 4 4 C 1.53002 * 109.47497 * 240.00350 * 2 1 3 5 5 O 1.45195 * 109.47224 * 120.00099 * 2 1 3 6 6 C 1.34638 * 117.00135 * 60.00489 * 5 2 1 7 7 O 1.21513 * 119.99867 * 359.97438 * 6 5 2 8 8 N 1.34777 * 120.00235 * 180.02562 * 6 5 2 9 9 C 1.46498 * 119.99828 * 180.27525 * 8 6 5 10 10 H 1.09002 * 112.85022 * 335.91707 * 9 8 6 11 11 C 1.53782 * 113.61718 * 107.22525 * 9 8 6 12 12 C 1.53774 * 87.08161 * 89.11276 * 11 9 8 13 13 H 1.09004 * 113.61904 * 270.88211 * 12 11 9 14 14 C 1.50706 * 113.69278 * 139.99453 * 12 11 9 15 15 O 1.21279 * 119.99686 * 262.47021 * 14 12 11 16 16 N 1.34768 * 120.00292 * 82.45998 * 14 12 11 17 17 N 1.40098 * 120.00216 * 180.02562 * 16 14 12 18 18 C 1.34781 * 120.00065 * 180.02562 * 17 16 14 19 19 O 1.21283 * 119.99721 * 0.02562 * 18 17 16 20 20 C 1.50696 * 120.00103 * 180.02562 * 18 17 16 21 21 C 1.50696 * 109.47122 * 179.97438 * 20 18 17 22 22 C 1.34849 * 125.89095 * 274.68818 * 21 20 18 23 23 C 1.40895 * 107.41585 * 179.88666 * 22 21 20 24 24 C 1.34845 * 107.41922 * 0.37979 * 23 22 21 25 25 C 1.50697 * 125.89240 * 179.73129 * 24 23 22 26 26 O 1.42900 * 109.47386 * 245.04119 * 25 24 23 27 27 Si 1.86299 * 109.47056 * 5.04412 * 25 24 23 28 28 N 1.36341 * 108.21674 * 359.77027 * 24 23 22 29 29 C 1.53781 * 113.61158 * 204.72374 * 9 8 6 30 30 H 1.08996 * 109.47509 * 299.99293 * 1 2 3 31 31 H 1.09006 * 109.47298 * 59.99979 * 1 2 3 32 32 H 1.09003 * 109.46856 * 179.97438 * 1 2 3 33 33 H 1.08995 * 109.47042 * 179.97438 * 3 2 1 34 34 H 1.08992 * 109.47205 * 300.00164 * 3 2 1 35 35 H 1.09001 * 109.46587 * 60.00389 * 3 2 1 36 36 H 1.09003 * 109.46840 * 300.00288 * 4 2 1 37 37 H 1.09006 * 109.47115 * 59.99560 * 4 2 1 38 38 H 1.08995 * 109.47291 * 179.97438 * 4 2 1 39 39 H 0.97001 * 119.99727 * 359.97438 * 8 6 5 40 40 H 1.08999 * 113.61704 * 203.66488 * 11 9 8 41 41 H 1.09006 * 113.61098 * 334.56706 * 11 9 8 42 42 H 0.97008 * 119.99952 * 0.02562 * 16 14 12 43 43 H 0.96991 * 119.99938 * 0.02562 * 17 16 14 44 44 H 1.09000 * 109.47209 * 299.99951 * 20 18 17 45 45 H 1.08999 * 109.46926 * 59.99854 * 20 18 17 46 46 H 1.07997 * 126.29357 * 0.02693 * 22 21 20 47 47 H 1.08003 * 126.28922 * 180.17190 * 23 22 21 48 48 H 1.09004 * 109.46644 * 125.04323 * 25 24 23 49 49 H 0.96695 * 113.99680 * 59.99923 * 26 25 24 50 50 H 1.48497 * 110.00025 * 58.68317 * 27 25 24 51 51 H 1.48505 * 109.99845 * 179.97438 * 27 25 24 52 52 H 0.96998 * 125.63676 * 179.97438 * 28 24 23 53 53 H 1.08995 * 113.61890 * 25.43111 * 29 9 8 54 54 H 1.08997 * 113.61580 * 156.33630 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9510 -2.5095 0.5039 8 7 2.0673 -2.6655 2.4170 9 6 1.6788 -4.0686 2.5801 10 1 0.7643 -4.3197 2.0427 11 6 2.8299 -5.0589 2.3373 12 6 3.1596 -4.9208 3.8329 13 1 3.8536 -4.1099 4.0541 14 6 3.5495 -6.2201 4.4895 15 8 2.7250 -6.8572 5.1101 16 7 4.8142 -6.6741 4.3869 17 7 5.1765 -7.8822 4.9968 18 6 6.4415 -8.3359 4.8946 19 8 7.2663 -7.6981 4.2750 20 6 6.8311 -9.6357 5.5502 21 6 8.2886 -9.9140 5.2869 22 6 8.7923 -10.5223 4.1939 23 6 10.1916 -10.5778 4.3495 24 6 10.4888 -10.0091 5.5354 25 6 11.8693 -9.8535 6.1194 26 8 11.9739 -10.6368 7.3101 27 14 13.1359 -10.4325 4.8820 28 7 9.3248 -9.5997 6.1154 29 6 1.6837 -4.5430 4.0429 30 1 -0.3634 0.5137 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 3.1300 1.4425 0.0005 34 1 1.6767 1.9564 -0.8899 35 1 1.6767 1.9563 0.8901 36 1 1.6767 -1.7488 -1.2493 37 1 1.6767 -0.2073 -2.1393 38 1 3.1300 -0.7207 -1.2495 39 1 2.6269 -2.2366 3.0832 40 1 2.4951 -6.0568 2.0542 41 1 3.6088 -4.6705 1.6809 42 1 5.4738 -6.1644 3.8907 43 1 4.5170 -8.3920 5.4926 44 1 6.6626 -9.5654 6.6248 45 1 6.2271 -10.4449 5.1398 46 1 8.2274 -10.8959 3.3527 47 1 10.8963 -11.0015 3.6492 48 1 12.0469 -8.8048 6.3577 49 1 11.8270 -11.5826 7.1727 50 1 13.0164 -9.6468 3.6275 51 1 14.5017 -10.2836 5.4457 52 1 9.2467 -9.1582 6.9756 53 1 1.5371 -3.7385 4.7634 54 1 1.0355 -5.4000 4.2261 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14937822_14644196.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:08 Heat of formation + Delta-G solvation = -81.313999 kcal Electronic energy + Delta-G solvation = -36062.297304 eV Core-core repulsion = 31003.877909 eV Total energy + Delta-G solvation = -5058.419396 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.198 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -42.38715 -42.11960 -41.55579 -40.59663 -39.31361 -37.78451 -37.68965 -36.46485 -35.34816 -34.03326 -33.61025 -32.12206 -31.91118 -29.35062 -28.37912 -28.31620 -27.35451 -26.82158 -25.22316 -23.98213 -22.70187 -22.44296 -21.37110 -21.25509 -21.08046 -20.33899 -19.50649 -19.15174 -18.83434 -18.63574 -17.64330 -17.37090 -17.19783 -17.00925 -16.86208 -16.58092 -16.23272 -16.12224 -15.96681 -15.56046 -15.40378 -15.28905 -15.18108 -14.83642 -14.56393 -14.43622 -14.37865 -14.11104 -13.91730 -13.84455 -13.66160 -13.50680 -13.39305 -13.12799 -13.02702 -12.92986 -12.88036 -12.85149 -12.53318 -12.45594 -12.33802 -12.12351 -12.00062 -11.84704 -11.71655 -11.46211 -11.41171 -11.14516 -11.06705 -10.63849 -10.25591 -9.80186 -9.53802 -8.99607 -4.96151 0.62015 1.08280 1.13479 1.21472 1.27576 1.57509 1.69942 1.70388 1.93103 1.98148 2.44977 2.92484 3.07273 3.22492 3.33453 3.49621 3.51950 3.65551 3.68707 3.72719 3.78594 3.79449 3.93006 3.94454 4.09310 4.15146 4.37830 4.41911 4.47718 4.53280 4.59355 4.60095 4.62865 4.67186 4.73922 4.75547 4.79076 4.80241 4.85696 4.86551 4.90263 4.99497 5.13088 5.24583 5.26033 5.28641 5.28782 5.40473 5.49974 5.57014 5.61349 5.98553 6.12290 6.34771 6.36770 6.64137 6.71293 6.75090 7.21307 7.30832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.368 6.368 6 C 0.646 3.354 7 O -0.592 6.592 8 N -0.681 5.681 9 C 0.137 3.863 10 H 0.100 0.900 11 C -0.130 4.130 12 C -0.121 4.121 13 H 0.146 0.854 14 C 0.527 3.473 15 O -0.567 6.567 16 N -0.522 5.522 17 N -0.522 5.522 18 C 0.515 3.485 19 O -0.567 6.567 20 C -0.055 4.055 21 C 0.029 3.971 22 C -0.194 4.194 23 C -0.201 4.201 24 C -0.019 4.019 25 C -0.052 4.052 26 O -0.558 6.558 27 Si 0.808 3.192 28 N -0.536 5.536 29 C -0.110 4.110 30 H 0.062 0.938 31 H 0.086 0.914 32 H 0.064 0.936 33 H 0.069 0.931 34 H 0.097 0.903 35 H 0.069 0.931 36 H 0.064 0.936 37 H 0.085 0.915 38 H 0.062 0.938 39 H 0.419 0.581 40 H 0.098 0.902 41 H 0.089 0.911 42 H 0.436 0.564 43 H 0.439 0.561 44 H 0.135 0.865 45 H 0.152 0.848 46 H 0.144 0.856 47 H 0.154 0.846 48 H 0.101 0.899 49 H 0.397 0.603 50 H -0.294 1.294 51 H -0.293 1.293 52 H 0.419 0.581 53 H 0.098 0.902 54 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.310 -0.879 1.835 2.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.092 3.908 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.282 6.282 6 C 0.400 3.600 7 O -0.482 6.482 8 N -0.341 5.341 9 C 0.033 3.967 10 H 0.118 0.882 11 C -0.169 4.169 12 C -0.143 4.143 13 H 0.164 0.836 14 C 0.315 3.685 15 O -0.444 6.444 16 N -0.269 5.269 17 N -0.272 5.272 18 C 0.302 3.698 19 O -0.444 6.444 20 C -0.096 4.096 21 C -0.085 4.085 22 C -0.218 4.218 23 C -0.226 4.226 24 C -0.132 4.132 25 C -0.162 4.162 26 O -0.366 6.366 27 Si 0.713 3.287 28 N -0.132 5.132 29 C -0.149 4.149 30 H 0.081 0.919 31 H 0.105 0.895 32 H 0.083 0.917 33 H 0.088 0.912 34 H 0.116 0.884 35 H 0.088 0.912 36 H 0.083 0.917 37 H 0.104 0.896 38 H 0.081 0.919 39 H 0.257 0.743 40 H 0.117 0.883 41 H 0.107 0.893 42 H 0.278 0.722 43 H 0.283 0.717 44 H 0.153 0.847 45 H 0.169 0.831 46 H 0.161 0.839 47 H 0.171 0.829 48 H 0.118 0.882 49 H 0.248 0.752 50 H -0.222 1.222 51 H -0.221 1.221 52 H 0.257 0.743 53 H 0.116 0.884 54 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 0.132 -0.198 1.313 1.335 hybrid contribution -0.159 0.918 0.725 1.181 sum -0.027 0.721 2.038 2.162 Atomic orbital electron populations 1.22483 0.94053 1.03749 1.03526 1.22343 0.94432 0.92536 0.81489 1.21894 1.02471 0.90919 1.04239 1.22477 1.01661 1.02287 0.97331 1.86310 1.71464 1.23202 1.47255 1.18313 0.78530 0.80733 0.82414 1.90920 1.42078 1.71036 1.44176 1.44304 1.55179 1.11439 1.23198 1.21731 0.98642 0.78185 0.98191 0.88209 1.23411 0.99138 1.00804 0.93585 1.22922 1.00145 0.94176 0.97044 0.83624 1.21173 0.79582 0.87773 0.79949 1.90736 1.50416 1.59693 1.43583 1.45157 1.12417 1.15561 1.53804 1.45055 1.12292 1.15721 1.54088 1.21407 0.79772 0.87970 0.80601 1.90785 1.50613 1.59592 1.43427 1.20137 0.90872 0.94247 1.04391 1.19762 0.89273 1.05800 0.93635 1.20884 0.94683 1.07114 0.99137 1.20938 0.96547 1.07521 0.97602 1.20984 0.88407 1.07266 0.96576 1.24900 0.96966 0.98811 0.95510 1.86446 1.94109 1.24465 1.31551 0.93079 0.72907 0.89397 0.73353 1.41891 1.05393 1.47064 1.18824 1.23222 0.93890 1.02559 0.95217 0.91889 0.89549 0.91707 0.91158 0.88400 0.91152 0.91688 0.89579 0.91893 0.74341 0.88308 0.89265 0.72165 0.71688 0.84679 0.83054 0.83865 0.82872 0.88166 0.75212 1.22168 1.22121 0.74341 0.88377 0.87618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.46 8.37 71.98 0.60 0.15 16 2 C 0.13 0.26 1.13 -10.79 -0.01 0.24 16 3 C -0.14 0.38 8.85 71.98 0.64 1.02 16 4 C -0.18 -0.44 8.37 71.98 0.60 0.16 16 5 O -0.37 -1.42 9.94 -55.48 -0.55 -1.97 16 6 C 0.65 3.07 8.06 129.79 1.05 4.11 16 7 O -0.59 -6.20 11.48 19.80 0.23 -5.97 16 8 N -0.68 1.61 5.27 -567.60 -2.99 -1.38 16 9 C 0.14 -0.43 4.32 45.52 0.20 -0.23 16 10 H 0.10 0.09 7.47 -2.39 -0.02 0.07 16 11 C -0.13 0.66 7.43 31.12 0.23 0.89 16 12 C -0.12 0.79 4.02 -11.01 -0.04 0.75 16 13 H 0.15 -1.70 8.14 -2.39 -0.02 -1.72 16 14 C 0.53 -0.59 7.48 87.66 0.66 0.07 16 15 O -0.57 -3.08 15.74 -3.03 -0.05 -3.12 16 16 N -0.52 0.97 6.26 -173.54 -1.09 -0.12 16 17 N -0.52 1.33 6.26 -173.53 -1.09 0.25 16 18 C 0.52 -0.26 7.94 87.66 0.70 0.44 16 19 O -0.57 -4.77 15.87 -3.04 -0.05 -4.82 16 20 C -0.06 0.37 6.24 29.10 0.18 0.55 16 21 C 0.03 0.01 5.66 41.08 0.23 0.24 16 22 C -0.19 -0.53 10.77 22.14 0.24 -0.29 16 23 C -0.20 -0.52 9.37 22.14 0.21 -0.31 16 24 C -0.02 -0.04 6.50 41.08 0.27 0.23 16 25 C -0.05 -0.02 3.08 71.24 0.22 0.20 16 26 O -0.56 0.11 12.88 -148.98 -1.92 -1.81 16 27 Si 0.81 -0.88 30.60 68.60 2.10 1.22 16 28 N -0.54 -0.34 6.07 -171.13 -1.04 -1.38 16 29 C -0.11 0.59 7.15 31.12 0.22 0.81 16 30 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 31 H 0.09 -0.06 8.14 -2.38 -0.02 -0.08 16 32 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 33 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 35 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 36 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 37 H 0.09 -0.06 8.14 -2.38 -0.02 -0.08 16 38 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 39 H 0.42 -3.11 8.81 -92.71 -0.82 -3.92 16 40 H 0.10 -0.39 8.10 -2.39 -0.02 -0.41 16 41 H 0.09 -0.47 8.14 -2.38 -0.02 -0.49 16 42 H 0.44 -1.25 8.00 -213.31 -1.71 -2.96 16 43 H 0.44 -2.38 8.00 -213.33 -1.71 -4.09 16 44 H 0.14 -1.66 8.14 -2.39 -0.02 -1.68 16 45 H 0.15 -1.82 8.14 -2.39 -0.02 -1.83 16 46 H 0.14 0.07 8.06 -2.91 -0.02 0.05 16 47 H 0.15 -0.16 6.24 -2.91 -0.02 -0.18 16 48 H 0.10 0.20 7.96 -2.39 -0.02 0.18 16 49 H 0.40 -3.17 8.70 -74.06 -0.64 -3.82 16 50 H -0.29 -1.61 7.11 99.48 0.71 -0.90 16 51 H -0.29 -1.52 7.11 99.48 0.71 -0.81 16 52 H 0.42 -1.10 8.96 -92.71 -0.83 -1.93 16 53 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 54 H 0.11 -0.25 7.43 -2.39 -0.02 -0.27 16 Total: 0.00 -30.68 446.52 -4.93 -35.61 By element: Atomic # 1 Polarization: -20.86 SS G_CDS: -4.67 Total: -25.52 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: 6.18 Total: 9.03 kcal Atomic # 7 Polarization: 3.57 SS G_CDS: -6.20 Total: -2.63 kcal Atomic # 8 Polarization: -15.36 SS G_CDS: -2.34 Total: -17.70 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: 2.10 Total: 1.22 kcal Total: -30.68 -4.93 -35.61 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14937822_14644196.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.706 kcal (2) G-P(sol) polarization free energy of solvation -30.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.929 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds