Wall clock time and date at job start Tue Mar 9 2021 12:58:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.46983 * 2 1 4 4 C 1.50695 * 109.46807 * 120.00130 * 2 1 3 5 5 C 1.35456 * 126.06753 * 244.96802 * 4 2 1 6 6 N 1.35531 * 108.87244 * 180.02562 * 5 4 2 7 7 C 1.37645 * 108.64621 * 0.02562 * 6 5 4 8 8 C 1.46679 * 126.23836 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00434 * 180.02562 * 8 7 6 10 10 N 1.34777 * 119.99308 * 0.29846 * 8 7 6 11 11 C 1.46505 * 119.99724 * 179.72494 * 10 8 7 12 12 C 1.53005 * 109.46904 * 180.02562 * 11 10 8 13 13 H 1.09000 * 109.46871 * 55.00538 * 12 11 10 14 14 C 1.53005 * 109.46702 * 174.99745 * 12 11 10 15 15 C 1.53005 * 109.46702 * 179.97438 * 14 12 11 16 16 C 1.53005 * 109.46930 * 300.00240 * 15 14 12 17 17 H 1.08999 * 109.47055 * 300.00007 * 16 15 14 18 18 C 1.52999 * 109.46810 * 180.02562 * 16 15 14 19 19 O 1.42900 * 109.47319 * 174.99918 * 18 16 15 20 20 C 1.52991 * 109.47270 * 60.00367 * 16 15 14 21 21 C 1.52996 * 109.47347 * 294.99923 * 12 11 10 22 22 C 1.37875 * 107.53493 * 0.26074 * 7 6 5 23 23 H 0.96698 * 114.00311 * 299.99994 * 1 2 3 24 24 H 1.09005 * 109.46569 * 239.99953 * 2 1 3 25 25 H 1.48508 * 109.99664 * 178.68113 * 3 2 1 26 26 H 1.48499 * 110.00117 * 300.00015 * 3 2 1 27 27 H 1.08000 * 125.56357 * 0.06305 * 5 4 2 28 28 H 0.96995 * 125.67706 * 179.97438 * 6 5 4 29 29 H 0.97000 * 120.00483 * 359.72926 * 10 8 7 30 30 H 1.09003 * 109.47169 * 299.99745 * 11 10 8 31 31 H 1.08993 * 109.47199 * 60.00006 * 11 10 8 32 32 H 1.08993 * 109.47342 * 299.99824 * 14 12 11 33 33 H 1.08999 * 109.47164 * 60.00066 * 14 12 11 34 34 H 1.08993 * 109.47018 * 60.00472 * 15 14 12 35 35 H 1.09001 * 109.46846 * 180.02562 * 15 14 12 36 36 H 1.09004 * 109.47213 * 294.99977 * 18 16 15 37 37 H 1.09007 * 109.47350 * 54.99488 * 18 16 15 38 38 H 0.96695 * 113.99853 * 180.02562 * 19 18 16 39 39 H 1.08999 * 109.47376 * 59.99836 * 20 16 15 40 40 H 1.08998 * 109.47176 * 179.97438 * 20 16 15 41 41 H 1.08999 * 109.46897 * 300.00165 * 21 12 11 42 42 H 1.08996 * 109.46671 * 59.99924 * 21 12 11 43 43 H 1.08002 * 126.46223 * 179.73619 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2304 5 6 2.6338 -0.1500 2.2439 6 7 2.9060 -1.1032 3.1682 7 6 2.3695 -2.2966 2.7408 8 6 2.4383 -3.5804 3.4468 9 8 1.9218 -4.5699 2.9621 10 7 3.0689 -3.6629 4.6351 11 6 3.1325 -4.9439 5.3432 12 6 3.8974 -4.7635 6.6561 13 1 3.4352 -3.9670 7.2392 14 6 3.8567 -6.0687 7.4534 15 6 4.6221 -5.8885 8.7659 16 6 6.0760 -5.5213 8.4622 17 1 6.5377 -6.3179 7.8788 18 6 6.8415 -5.3417 9.7747 19 8 8.2238 -5.1138 9.4927 20 6 6.1166 -4.2162 7.6649 21 6 5.3513 -4.3960 6.3530 22 6 1.7612 -2.0668 1.5251 23 1 -0.3934 0.4417 0.7650 24 1 1.7923 -0.5139 -0.8900 25 1 3.5346 1.7702 0.0321 26 1 1.5614 2.4679 -1.2085 27 1 2.9285 0.8872 2.3057 28 1 3.3977 -0.9672 3.9931 29 1 3.4807 -2.8742 5.0215 30 1 2.1217 -5.2915 5.5568 31 1 3.6453 -5.6777 4.7215 32 1 2.8210 -6.3305 7.6693 33 1 4.3188 -6.8653 6.8702 34 1 4.1604 -5.0919 9.3493 35 1 4.5936 -6.8185 9.3337 36 1 6.4360 -4.4882 10.3180 37 1 6.7380 -6.2412 10.3817 38 1 8.7709 -4.9913 10.2805 39 1 5.6549 -3.4195 8.2483 40 1 7.1524 -3.9543 7.4489 41 1 5.8133 -5.1925 5.7698 42 1 5.3801 -3.4662 5.7849 43 1 1.2474 -2.7962 0.9164 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_10543058.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:52 Heat of formation + Delta-G solvation = -92.988284 kcal Electronic energy + Delta-G solvation = -23559.756368 eV Core-core repulsion = 19992.112081 eV Total energy + Delta-G solvation = -3567.644287 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.47151 -40.69353 -39.73792 -37.70216 -37.59987 -35.83967 -33.16412 -32.38023 -31.88055 -30.73552 -28.32427 -26.45745 -25.09483 -24.04975 -23.29479 -21.83356 -21.22051 -20.96160 -20.64784 -19.94371 -18.31167 -17.53947 -17.08730 -16.82618 -16.73201 -16.31473 -15.99088 -15.90302 -15.51907 -15.34405 -15.05454 -14.87503 -14.71663 -14.54020 -14.27428 -13.96811 -13.87284 -13.52243 -13.46613 -13.27163 -12.95088 -12.63102 -12.22051 -12.21411 -12.04855 -11.94193 -11.56673 -11.34455 -11.21486 -11.08062 -10.91889 -10.32984 -10.20290 -9.94704 -9.29425 -5.04181 0.42735 1.35885 1.50961 1.67090 1.94209 2.01894 2.08292 2.40706 3.11099 3.46336 3.55806 3.60097 3.62921 3.77488 3.88795 3.93433 4.03513 4.05114 4.15467 4.28566 4.32062 4.36110 4.36809 4.41362 4.49767 4.56091 4.64284 4.68431 4.74152 4.79618 4.92219 4.93441 4.99040 5.04934 5.06824 5.08826 5.13984 5.28203 5.31700 5.40330 5.60211 5.80563 6.20557 6.42383 6.60509 6.73085 7.14750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.033 4.033 3 Si 0.686 3.314 4 C -0.211 4.211 5 C 0.035 3.965 6 N -0.535 5.535 7 C -0.058 4.058 8 C 0.589 3.411 9 O -0.524 6.524 10 N -0.731 5.731 11 C 0.124 3.876 12 C -0.100 4.100 13 H 0.078 0.922 14 C -0.110 4.110 15 C -0.112 4.112 16 C -0.089 4.089 17 H 0.078 0.922 18 C 0.078 3.922 19 O -0.574 6.574 20 C -0.110 4.110 21 C -0.115 4.115 22 C -0.076 4.076 23 H 0.377 0.623 24 H 0.111 0.889 25 H -0.257 1.257 26 H -0.256 1.256 27 H 0.176 0.824 28 H 0.418 0.582 29 H 0.393 0.607 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.069 0.931 34 H 0.065 0.935 35 H 0.067 0.933 36 H 0.045 0.955 37 H 0.046 0.954 38 H 0.380 0.620 39 H 0.060 0.940 40 H 0.071 0.929 41 H 0.067 0.933 42 H 0.059 0.941 43 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.021 4.207 7.427 8.772 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.145 4.145 3 Si 0.588 3.412 4 C -0.218 4.218 5 C -0.102 4.102 6 N -0.132 5.132 7 C -0.170 4.170 8 C 0.376 3.624 9 O -0.400 6.400 10 N -0.383 5.383 11 C 0.000 4.000 12 C -0.118 4.118 13 H 0.096 0.904 14 C -0.148 4.148 15 C -0.150 4.150 16 C -0.107 4.107 17 H 0.097 0.903 18 C 0.000 4.000 19 O -0.379 6.379 20 C -0.147 4.147 21 C -0.153 4.153 22 C -0.102 4.102 23 H 0.224 0.776 24 H 0.129 0.871 25 H -0.182 1.182 26 H -0.181 1.181 27 H 0.193 0.807 28 H 0.255 0.745 29 H 0.227 0.773 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.089 0.911 33 H 0.088 0.912 34 H 0.084 0.916 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.064 0.936 38 H 0.227 0.773 39 H 0.078 0.922 40 H 0.090 0.910 41 H 0.086 0.914 42 H 0.078 0.922 43 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.076 3.652 5.636 7.030 hybrid contribution 0.788 -0.070 1.093 1.350 sum 2.865 3.582 6.730 8.144 Atomic orbital electron populations 1.86505 1.17456 1.81742 1.49006 1.24375 0.84759 1.09029 0.96331 0.95208 0.80448 0.77746 0.87752 1.19895 1.07704 0.95129 0.99058 1.21864 1.03066 0.94604 0.90661 1.41920 1.43785 1.07858 1.19599 1.20425 1.10848 0.86088 0.99667 1.17047 0.78305 0.86721 0.80305 1.90884 1.46220 1.36186 1.66667 1.45888 1.58151 1.12783 1.21511 1.21477 1.01052 0.85050 0.92377 1.21448 0.95949 0.99247 0.95187 0.90413 1.21471 1.00893 0.96589 0.95876 1.21504 0.94129 1.01919 0.97448 1.21172 0.94890 0.98940 0.95720 0.90333 1.22245 0.81780 0.99209 0.96736 1.86471 1.19353 1.95245 1.36875 1.21502 1.00877 0.96767 0.95595 1.21617 0.94423 1.01601 0.97653 1.21232 0.99295 0.95687 0.94001 0.77595 0.87140 1.18232 1.18086 0.80701 0.74497 0.77277 0.90965 0.90984 0.91136 0.91248 0.91619 0.91381 0.93694 0.93621 0.77269 0.92168 0.91040 0.91433 0.92247 0.83226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.58 12.88 -35.23 -0.45 -1.03 16 2 C -0.03 -0.01 3.02 36.00 0.11 0.10 16 3 Si 0.69 -1.09 30.60 -169.99 -5.20 -6.30 16 4 C -0.21 -0.08 5.43 -105.02 -0.57 -0.65 16 5 C 0.03 -0.07 10.45 -16.91 -0.18 -0.25 16 6 N -0.54 1.21 5.99 -9.39 -0.06 1.16 16 7 C -0.06 -0.08 7.06 -81.98 -0.58 -0.66 16 8 C 0.59 1.61 7.79 -12.85 -0.10 1.51 16 9 O -0.52 -3.68 16.88 5.20 0.09 -3.59 16 10 N -0.73 0.58 5.28 -61.61 -0.33 0.25 16 11 C 0.12 -0.08 5.06 -4.04 -0.02 -0.10 16 12 C -0.10 0.25 2.23 -90.62 -0.20 0.05 16 13 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 14 C -0.11 0.26 5.20 -26.73 -0.14 0.12 16 15 C -0.11 0.26 5.20 -26.73 -0.14 0.13 16 16 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 17 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 18 C 0.08 -0.10 6.43 37.16 0.24 0.14 16 19 O -0.57 -0.04 13.20 -35.23 -0.46 -0.50 16 20 C -0.11 0.16 5.10 -26.76 -0.14 0.02 16 21 C -0.12 0.25 5.07 -26.76 -0.14 0.11 16 22 C -0.08 -0.20 10.59 -39.12 -0.41 -0.61 16 23 H 0.38 -1.12 8.70 45.56 0.40 -0.73 16 24 H 0.11 0.12 7.96 -51.93 -0.41 -0.29 16 25 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 26 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 27 H 0.18 -0.93 6.21 -52.49 -0.33 -1.25 16 28 H 0.42 -2.35 8.19 -40.82 -0.33 -2.68 16 29 H 0.39 -1.45 6.78 -40.82 -0.28 -1.73 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 37 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.38 -1.49 9.12 45.56 0.42 -1.08 16 39 H 0.06 -0.11 8.14 -51.93 -0.42 -0.54 16 40 H 0.07 0.00 7.82 -51.93 -0.41 -0.40 16 41 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 42 H 0.06 -0.17 7.18 -51.93 -0.37 -0.54 16 43 H 0.15 0.55 8.06 -52.49 -0.42 0.13 16 LS Contribution 347.82 15.07 5.24 5.24 Total: 0.00 -10.00 347.82 -9.67 -19.66 By element: Atomic # 1 Polarization: -8.68 SS G_CDS: -6.01 Total: -14.69 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -2.48 Total: -0.21 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -0.38 Total: 1.41 kcal Atomic # 8 Polarization: -4.30 SS G_CDS: -0.83 Total: -5.13 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.20 Total: -6.30 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -10.00 -9.67 -19.66 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_10543058.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.324 kcal (2) G-P(sol) polarization free energy of solvation -9.996 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.320 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.988 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds