Wall clock time and date at job start Tue Mar 9 2021 12:58:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.46983 * 2 1 4 4 C 1.50695 * 109.46807 * 120.00130 * 2 1 3 5 5 C 1.35456 * 126.06753 * 244.96802 * 4 2 1 6 6 N 1.35531 * 108.87244 * 180.02562 * 5 4 2 7 7 C 1.37645 * 108.64621 * 0.02562 * 6 5 4 8 8 C 1.46679 * 126.23836 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00434 * 180.02562 * 8 7 6 10 10 N 1.34777 * 119.99308 * 0.29846 * 8 7 6 11 11 C 1.46505 * 119.99724 * 179.72494 * 10 8 7 12 12 C 1.53005 * 109.46904 * 180.02562 * 11 10 8 13 13 H 1.09000 * 109.46871 * 55.00538 * 12 11 10 14 14 C 1.53005 * 109.46702 * 174.99745 * 12 11 10 15 15 C 1.53005 * 109.46702 * 179.97438 * 14 12 11 16 16 C 1.53005 * 109.46930 * 300.00240 * 15 14 12 17 17 H 1.08999 * 109.47055 * 300.00007 * 16 15 14 18 18 C 1.52999 * 109.46810 * 180.02562 * 16 15 14 19 19 O 1.42900 * 109.47319 * 174.99918 * 18 16 15 20 20 C 1.52991 * 109.47270 * 60.00367 * 16 15 14 21 21 C 1.52996 * 109.47347 * 294.99923 * 12 11 10 22 22 C 1.37875 * 107.53493 * 0.26074 * 7 6 5 23 23 H 0.96698 * 114.00311 * 299.99994 * 1 2 3 24 24 H 1.09005 * 109.46569 * 239.99953 * 2 1 3 25 25 H 1.48508 * 109.99664 * 178.68113 * 3 2 1 26 26 H 1.48499 * 110.00117 * 300.00015 * 3 2 1 27 27 H 1.08000 * 125.56357 * 0.06305 * 5 4 2 28 28 H 0.96995 * 125.67706 * 179.97438 * 6 5 4 29 29 H 0.97000 * 120.00483 * 359.72926 * 10 8 7 30 30 H 1.09003 * 109.47169 * 299.99745 * 11 10 8 31 31 H 1.08993 * 109.47199 * 60.00006 * 11 10 8 32 32 H 1.08993 * 109.47342 * 299.99824 * 14 12 11 33 33 H 1.08999 * 109.47164 * 60.00066 * 14 12 11 34 34 H 1.08993 * 109.47018 * 60.00472 * 15 14 12 35 35 H 1.09001 * 109.46846 * 180.02562 * 15 14 12 36 36 H 1.09004 * 109.47213 * 294.99977 * 18 16 15 37 37 H 1.09007 * 109.47350 * 54.99488 * 18 16 15 38 38 H 0.96695 * 113.99853 * 180.02562 * 19 18 16 39 39 H 1.08999 * 109.47376 * 59.99836 * 20 16 15 40 40 H 1.08998 * 109.47176 * 179.97438 * 20 16 15 41 41 H 1.08999 * 109.46897 * 300.00165 * 21 12 11 42 42 H 1.08996 * 109.46671 * 59.99924 * 21 12 11 43 43 H 1.08002 * 126.46223 * 179.73619 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2304 5 6 2.6338 -0.1500 2.2439 6 7 2.9060 -1.1032 3.1682 7 6 2.3695 -2.2966 2.7408 8 6 2.4383 -3.5804 3.4468 9 8 1.9218 -4.5699 2.9621 10 7 3.0689 -3.6629 4.6351 11 6 3.1325 -4.9439 5.3432 12 6 3.8974 -4.7635 6.6561 13 1 3.4352 -3.9670 7.2392 14 6 3.8567 -6.0687 7.4534 15 6 4.6221 -5.8885 8.7659 16 6 6.0760 -5.5213 8.4622 17 1 6.5377 -6.3179 7.8788 18 6 6.8415 -5.3417 9.7747 19 8 8.2238 -5.1138 9.4927 20 6 6.1166 -4.2162 7.6649 21 6 5.3513 -4.3960 6.3530 22 6 1.7612 -2.0668 1.5251 23 1 -0.3934 0.4417 0.7650 24 1 1.7923 -0.5139 -0.8900 25 1 3.5346 1.7702 0.0321 26 1 1.5614 2.4679 -1.2085 27 1 2.9285 0.8872 2.3057 28 1 3.3977 -0.9672 3.9931 29 1 3.4807 -2.8742 5.0215 30 1 2.1217 -5.2915 5.5568 31 1 3.6453 -5.6777 4.7215 32 1 2.8210 -6.3305 7.6693 33 1 4.3188 -6.8653 6.8702 34 1 4.1604 -5.0919 9.3493 35 1 4.5936 -6.8185 9.3337 36 1 6.4360 -4.4882 10.3180 37 1 6.7380 -6.2412 10.3817 38 1 8.7709 -4.9913 10.2805 39 1 5.6549 -3.4195 8.2483 40 1 7.1524 -3.9543 7.4489 41 1 5.8133 -5.1925 5.7698 42 1 5.3801 -3.4662 5.7849 43 1 1.2474 -2.7962 0.9164 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_10543058.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:51 Heat of formation + Delta-G solvation = -97.860051 kcal Electronic energy + Delta-G solvation = -23559.967624 eV Core-core repulsion = 19992.112081 eV Total energy + Delta-G solvation = -3567.855542 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.48009 -40.69213 -39.78952 -37.65208 -37.62307 -35.91499 -33.14208 -32.36762 -31.73394 -30.76490 -28.28805 -26.44098 -25.03552 -23.97741 -23.26154 -21.75611 -21.25393 -20.88504 -20.61308 -19.93607 -18.22099 -17.56185 -17.19506 -16.82223 -16.72575 -16.28775 -15.93455 -15.88214 -15.52115 -15.27372 -14.98712 -14.78461 -14.72888 -14.52413 -14.34664 -13.96427 -13.90380 -13.49722 -13.46493 -13.12357 -12.85708 -12.54209 -12.26382 -12.06702 -11.96987 -11.93649 -11.45873 -11.42121 -11.10111 -11.09291 -10.79589 -10.32816 -10.32452 -9.96200 -9.28991 -4.92891 0.34800 1.42351 1.52383 1.74572 1.93376 2.10134 2.14786 2.24294 3.29185 3.59271 3.68014 3.70573 3.72478 3.81046 3.98318 4.07107 4.15137 4.17599 4.28775 4.37057 4.42388 4.46345 4.49004 4.56442 4.62623 4.66232 4.67910 4.74428 4.77295 4.88930 4.94302 5.01897 5.06890 5.12871 5.17319 5.21938 5.24663 5.32479 5.43919 5.53721 5.57915 5.72062 6.33161 6.51451 6.87637 6.91697 7.02939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.054 4.054 3 Si 0.805 3.195 4 C -0.228 4.228 5 C 0.062 3.938 6 N -0.515 5.515 7 C -0.070 4.070 8 C 0.585 3.415 9 O -0.579 6.579 10 N -0.712 5.712 11 C 0.125 3.875 12 C -0.086 4.086 13 H 0.094 0.906 14 C -0.112 4.112 15 C -0.107 4.107 16 C -0.091 4.091 17 H 0.059 0.941 18 C 0.075 3.925 19 O -0.597 6.597 20 C -0.105 4.105 21 C -0.113 4.113 22 C -0.106 4.106 23 H 0.394 0.606 24 H 0.090 0.910 25 H -0.275 1.275 26 H -0.310 1.310 27 H 0.219 0.781 28 H 0.437 0.563 29 H 0.411 0.589 30 H 0.063 0.937 31 H 0.055 0.945 32 H 0.074 0.926 33 H 0.059 0.941 34 H 0.076 0.924 35 H 0.069 0.931 36 H 0.056 0.944 37 H 0.050 0.950 38 H 0.395 0.605 39 H 0.072 0.928 40 H 0.055 0.945 41 H 0.051 0.949 42 H 0.071 0.929 43 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.696 6.484 9.378 11.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.163 4.163 3 Si 0.710 3.290 4 C -0.235 4.235 5 C -0.076 4.076 6 N -0.112 5.112 7 C -0.183 4.183 8 C 0.374 3.626 9 O -0.459 6.459 10 N -0.364 5.364 11 C 0.001 3.999 12 C -0.105 4.105 13 H 0.112 0.888 14 C -0.150 4.150 15 C -0.144 4.144 16 C -0.110 4.110 17 H 0.077 0.923 18 C -0.002 4.002 19 O -0.405 6.405 20 C -0.142 4.142 21 C -0.150 4.150 22 C -0.134 4.134 23 H 0.243 0.757 24 H 0.107 0.893 25 H -0.201 1.201 26 H -0.239 1.239 27 H 0.235 0.765 28 H 0.279 0.721 29 H 0.248 0.752 30 H 0.082 0.918 31 H 0.074 0.926 32 H 0.093 0.907 33 H 0.078 0.922 34 H 0.095 0.905 35 H 0.088 0.912 36 H 0.075 0.925 37 H 0.068 0.932 38 H 0.244 0.756 39 H 0.090 0.910 40 H 0.073 0.927 41 H 0.070 0.930 42 H 0.090 0.910 43 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 2.783 5.924 7.683 10.093 hybrid contribution 0.577 -0.800 0.440 1.080 sum 3.360 5.124 8.123 10.175 Atomic orbital electron populations 1.86457 1.18227 1.82410 1.50301 1.24762 0.84512 1.11322 0.95665 0.93928 0.77172 0.73018 0.84869 1.19957 1.09100 0.94244 1.00175 1.22410 1.00330 0.95895 0.88945 1.41852 1.42769 1.06401 1.20184 1.20093 1.11929 0.86780 0.99499 1.17292 0.77863 0.86570 0.80859 1.90849 1.48799 1.38053 1.68188 1.45722 1.56830 1.13512 1.20306 1.21462 1.00684 0.84730 0.92990 1.21346 0.95404 0.99665 0.94036 0.88756 1.21486 1.01121 0.96437 0.95961 1.21460 0.93271 1.02382 0.97309 1.21187 0.95534 0.98487 0.95745 0.92271 1.22321 0.81282 0.99908 0.96694 1.86432 1.20260 1.95337 1.38482 1.21444 1.00032 0.96925 0.95848 1.21592 0.94344 1.01680 0.97423 1.21234 1.00517 0.96704 0.94907 0.75675 0.89269 1.20114 1.23903 0.76477 0.72145 0.75236 0.91816 0.92631 0.90685 0.92220 0.90539 0.91232 0.92534 0.93186 0.75556 0.90967 0.92661 0.92973 0.90991 0.86053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.80 12.88 -148.98 -1.92 -3.72 16 2 C -0.05 -0.06 3.02 71.23 0.22 0.16 16 3 Si 0.81 -3.58 30.60 68.60 2.10 -1.48 16 4 C -0.23 -0.20 5.43 -20.12 -0.11 -0.31 16 5 C 0.06 -0.41 10.45 83.48 0.87 0.47 16 6 N -0.51 3.29 5.99 -183.62 -1.10 2.19 16 7 C -0.07 -0.23 7.06 40.35 0.28 0.05 16 8 C 0.59 4.01 7.79 86.45 0.67 4.68 16 9 O -0.58 -9.88 16.88 -4.33 -0.07 -9.96 16 10 N -0.71 1.11 5.28 -467.06 -2.47 -1.35 16 11 C 0.12 -0.09 5.06 86.38 0.44 0.35 16 12 C -0.09 0.48 2.23 -10.79 -0.02 0.46 16 13 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 14 C -0.11 0.52 5.20 30.60 0.16 0.68 16 15 C -0.11 0.57 5.20 30.60 0.16 0.73 16 16 C -0.09 0.23 2.43 -10.80 -0.03 0.21 16 17 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 18 C 0.08 -0.23 6.43 71.98 0.46 0.23 16 19 O -0.60 -0.07 13.20 -148.98 -1.97 -2.03 16 20 C -0.10 0.37 5.10 30.57 0.16 0.52 16 21 C -0.11 0.53 5.07 30.58 0.16 0.68 16 22 C -0.11 -0.77 10.59 22.57 0.24 -0.53 16 23 H 0.39 -2.29 8.70 -74.06 -0.64 -2.93 16 24 H 0.09 0.39 7.96 -2.38 -0.02 0.37 16 25 H -0.27 0.39 7.11 99.48 0.71 1.09 16 26 H -0.31 -1.46 7.11 99.48 0.71 -0.75 16 27 H 0.22 -3.31 6.21 -2.91 -0.02 -3.33 16 28 H 0.44 -6.26 8.19 -92.71 -0.76 -7.02 16 29 H 0.41 -3.65 6.78 -92.71 -0.63 -4.28 16 30 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 31 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 32 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 33 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 34 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 35 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 36 H 0.06 -0.31 8.14 -2.38 -0.02 -0.33 16 37 H 0.05 -0.21 8.14 -2.38 -0.02 -0.23 16 38 H 0.39 -3.16 9.12 -74.06 -0.68 -3.83 16 39 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 40 H 0.05 0.01 7.82 -2.39 -0.02 -0.01 16 41 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 42 H 0.07 -0.52 7.18 -2.39 -0.02 -0.54 16 43 H 0.12 1.45 8.06 -2.91 -0.02 1.42 16 Total: 0.00 -27.49 347.82 -3.39 -30.88 By element: Atomic # 1 Polarization: -21.29 SS G_CDS: -1.62 Total: -22.91 kcal Atomic # 6 Polarization: 4.73 SS G_CDS: 3.65 Total: 8.39 kcal Atomic # 7 Polarization: 4.40 SS G_CDS: -3.57 Total: 0.84 kcal Atomic # 8 Polarization: -11.76 SS G_CDS: -3.96 Total: -15.72 kcal Atomic # 14 Polarization: -3.58 SS G_CDS: 2.10 Total: -1.48 kcal Total: -27.49 -3.39 -30.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_10543058.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.979 kcal (2) G-P(sol) polarization free energy of solvation -27.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.881 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.860 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds